RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 ARHGEF5Q12774 1597 aa13.88□□□□□ -0.19
CRLF3-205ENST00000583805 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
CRLF3-205ENST00000583805 DCAF8L1A6NGE4 600 aa13.86□□□□□ -0.19
CRLF3-205ENST00000583805 CAMSAP2Q08AD1 1489 aa13.86□□□□□ -0.19
CRLF3-205ENST00000583805 CCDC141Q6ZP82 1450 aa13.86□□□□□ -0.19
CRLF3-205ENST00000583805 MBD5Q9P267 1494 aa13.86□□□□□ -0.19
CRLF3-205ENST00000583805 MAP3K1Q13233 1512 aa13.85□□□□□ -0.19
CRLF3-205ENST00000583805 VPS8Q8N3P4 1428 aa13.85□□□□□ -0.19
CRLF3-205ENST00000583805 CEBPAP49715 358 aaPredicted RBP13.85□□□□□ -0.19
CRLF3-205ENST00000583805 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.19
CRLF3-205ENST00000583805 ZC3H13Q5T200 1668 aaKnown RBP13.83□□□□□ -0.2
CRLF3-205ENST00000583805 POLR1AO95602 1720 aaPredicted RBP13.83□□□□□ -0.2
CRLF3-205ENST00000583805 PTPRTO14522 1441 aa13.82□□□□□ -0.2
CRLF3-205ENST00000583805 MAST1Q9Y2H9 1570 aa13.82□□□□□ -0.2
CRLF3-205ENST00000583805 CEP170BQ9Y4F5 1589 aaPredicted RBP13.82□□□□□ -0.2
CRLF3-205ENST00000583805 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
CRLF3-205ENST00000583805 LRRC9Q6ZRR7 1453 aa13.81□□□□□ -0.2
CRLF3-205ENST00000583805 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
CRLF3-205ENST00000583805 CAMSAP1Q5T5Y3 1602 aa13.81□□□□□ -0.2
CRLF3-205ENST00000583805 ZMYM3Q14202 1370 aa13.81□□□□□ -0.2
CRLF3-205ENST00000583805 CROCC2H7BZ55 1655 aa13.8□□□□□ -0.2
CRLF3-205ENST00000583805 NCOA1Q15788 1441 aa13.8□□□□□ -0.2
CRLF3-205ENST00000583805 KDM5DQ9BY66 1539 aa13.8□□□□□ -0.2
CRLF3-205ENST00000583805 RNF17Q9BXT8 1623 aaKnown RBP13.79□□□□□ -0.2
CRLF3-205ENST00000583805 PLA2R1Q13018 1463 aa13.79□□□□□ -0.2
CRLF3-205ENST00000583805 CERKQ8TCT0 537 aa13.78□□□□□ -0.2
CRLF3-205ENST00000583805 PTPRKQ15262 1439 aa13.77□□□□□ -0.21
CRLF3-205ENST00000583805 IQSEC2Q5JU85 1478 aa13.77□□□□□ -0.21
CRLF3-205ENST00000583805 DHX29Q7Z478 1369 aaKnown RBP13.77□□□□□ -0.21
CRLF3-205ENST00000583805 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
CRLF3-205ENST00000583805 ZNF644Q9H582 1327 aaPredicted RBP13.76□□□□□ -0.21
CRLF3-205ENST00000583805 DNMT1P26358 1616 aaKnown RBP13.75□□□□□ -0.21
CRLF3-205ENST00000583805 MIA2Q96PC5 1412 aa13.74□□□□□ -0.21
CRLF3-205ENST00000583805 GGT6Q6P531 493 aa13.74□□□□□ -0.21
CRLF3-205ENST00000583805 PZPP20742 1482 aa13.74□□□□□ -0.21
CRLF3-205ENST00000583805 CEP152O94986 1710 aa13.73□□□□□ -0.21
CRLF3-205ENST00000583805 LTBP4Q8N2S1 1624 aa13.73□□□□□ -0.21
CRLF3-205ENST00000583805 A2ML1A8K2U0 1454 aa13.73□□□□□ -0.21
CRLF3-205ENST00000583805 MYOM3Q5VTT5 1437 aa13.73□□□□□ -0.21
CRLF3-205ENST00000583805 CFAP65Q6ZU64 1925 aaKnown RBP13.72□□□□□ -0.21
CRLF3-205ENST00000583805 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
CRLF3-205ENST00000583805 PTPN23Q9H3S7 1636 aa13.71□□□□□ -0.22
CRLF3-205ENST00000583805 TSPY4P0CV99 314 aa13.7□□□□□ -0.22
CRLF3-205ENST00000583805 TSPY10P0CW01 314 aa13.7□□□□□ -0.22
CRLF3-205ENST00000583805 SHANK2Q9UPX8 1470 aa13.69□□□□□ -0.22
CRLF3-205ENST00000583805 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
CRLF3-205ENST00000583805 DUOX2Q9NRD8 1548 aa13.69□□□□□ -0.22
CRLF3-205ENST00000583805 KIF3BO15066 747 aa13.68□□□□□ -0.22
CRLF3-205ENST00000583805 APLP2Q06481 763 aa13.68□□□□□ -0.22
CRLF3-205ENST00000583805 PKD2Q13563 968 aa13.68□□□□□ -0.22
CRLF3-205ENST00000583805 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
CRLF3-205ENST00000583805 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
CRLF3-205ENST00000583805 NLRP1Q9C000 1473 aa13.67□□□□□ -0.22
CRLF3-205ENST00000583805 SPATA31D1Q6ZQQ2 1576 aa13.66□□□□□ -0.22
CRLF3-205ENST00000583805 ABCC3O15438 1527 aa13.66□□□□□ -0.22
CRLF3-205ENST00000583805 TNRQ92752 1358 aa13.66□□□□□ -0.22
CRLF3-205ENST00000583805 NEURL4Q96JN8 1562 aa13.66□□□□□ -0.22
CRLF3-205ENST00000583805 PRDM15P57071 1507 aaPredicted RBP13.65□□□□□ -0.22
CRLF3-205ENST00000583805 LOC105371045A0A1W2PR82 267 aa13.65□□□□□ -0.22
CRLF3-205ENST00000583805 WASHC2CQ9Y4E1 1318 aa13.64□□□□□ -0.23
CRLF3-205ENST00000583805 IQGAP1P46940 1657 aa13.64□□□□□ -0.23
CRLF3-205ENST00000583805 UGGT1Q9NYU2 1555 aa13.64□□□□□ -0.23
CRLF3-205ENST00000583805 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
CRLF3-205ENST00000583805 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
CRLF3-205ENST00000583805 ERBINQ96RT1 1412 aa13.63□□□□□ -0.23
CRLF3-205ENST00000583805 KDM5AP29375 1690 aaKnown RBP13.63□□□□□ -0.23
CRLF3-205ENST00000583805 CPS1P31327 1500 aa13.61□□□□□ -0.23
CRLF3-205ENST00000583805 KANK4Q5T7N3 995 aaPredicted RBP13.61□□□□□ -0.23
CRLF3-205ENST00000583805 NCKAP5LQ9HCH0 1330 aa13.61□□□□□ -0.23
CRLF3-205ENST00000583805 ERVK-7P63135 1459 aa13.6□□□□□ -0.23
CRLF3-205ENST00000583805 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
CRLF3-205ENST00000583805 MED14O60244 1454 aa13.59□□□□□ -0.23
CRLF3-205ENST00000583805 SYNMO15061 1565 aa13.58□□□□□ -0.23
CRLF3-205ENST00000583805 DAPK1P53355 1430 aa13.58□□□□□ -0.24
CRLF3-205ENST00000583805 ZNF219Q9P2Y4 722 aaPredicted RBP13.58□□□□□ -0.24
CRLF3-205ENST00000583805 KIF15Q9NS87 1388 aa13.58□□□□□ -0.24
CRLF3-205ENST00000583805 ABCC5O15440 1437 aa13.57□□□□□ -0.24
CRLF3-205ENST00000583805 ARHGAP31Q2M1Z3 1444 aa13.56□□□□□ -0.24
CRLF3-205ENST00000583805 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
CRLF3-205ENST00000583805 THEMISQ8N1K5 641 aaPredicted RBP13.56□□□□□ -0.24
CRLF3-205ENST00000583805 VWDEQ8N2E2 1590 aa13.56□□□□□ -0.24
CRLF3-205ENST00000583805 ZNF335Q9H4Z2 1342 aaPredicted RBP13.56□□□□□ -0.24
CRLF3-205ENST00000583805 LMTK2Q8IWU2 1503 aa13.54□□□□□ -0.24
CRLF3-205ENST00000583805 PIK3C2BO00750 1634 aa13.54□□□□□ -0.24
CRLF3-205ENST00000583805 STRCP1A6NGW2 1772 aa13.54□□□□□ -0.24
CRLF3-205ENST00000583805 ADGRL2O95490 1459 aa13.54□□□□□ -0.24
CRLF3-205ENST00000583805 GCC2Q8IWJ2 1684 aa13.53□□□□□ -0.24
CRLF3-205ENST00000583805 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
CRLF3-205ENST00000583805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.53□□□□□ -0.24
CRLF3-205ENST00000583805 NPHP4O75161 1426 aaPredicted RBP13.53□□□□□ -0.24
CRLF3-205ENST00000583805 KANK1Q14678 1352 aa13.52□□□□□ -0.25
CRLF3-205ENST00000583805 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.25
CRLF3-205ENST00000583805 SLIT1O75093 1534 aa13.52□□□□□ -0.25
CRLF3-205ENST00000583805 EFCAB6Q5THR3 1501 aa13.51□□□□□ -0.25
CRLF3-205ENST00000583805 MYO5BQ9ULV0 1848 aa13.5□□□□□ -0.25
CRLF3-205ENST00000583805 TET3O43151 1660 aa13.5□□□□□ -0.25
CRLF3-205ENST00000583805 ARHGAP23Q9P227 1491 aa13.49□□□□□ -0.25
CRLF3-205ENST00000583805 XIRP1Q702N8 1843 aaKnown RBP13.49□□□□□ -0.25
CRLF3-205ENST00000583805 SPDYE4A6NLX3 237 aa13.49□□□□□ -0.25
CRLF3-205ENST00000583805 SCAF11Q99590 1463 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms