RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 UHRF1BP1Q6BDS2 1440 aa18.78■□□□□ 0.6
GGA3-214ENST00000582717 POLR1AO95602 1720 aaPredicted RBP18.78■□□□□ 0.6
GGA3-214ENST00000582717 FANCAO15360 1455 aa18.78■□□□□ 0.6
GGA3-214ENST00000582717 ZNF326Q5BKZ1 582 aaKnown RBP18.77■□□□□ 0.6
GGA3-214ENST00000582717 CCDC7Q96M83 1385 aa18.77■□□□□ 0.59
GGA3-214ENST00000582717 AFAP1Q8N556 730 aa18.76■□□□□ 0.59
GGA3-214ENST00000582717 PLA2R1Q13018 1463 aa18.76■□□□□ 0.59
GGA3-214ENST00000582717 FANCIQ9NVI1 1328 aa18.76■□□□□ 0.59
GGA3-214ENST00000582717 BCL11AQ9H165 835 aa18.75■□□□□ 0.59
GGA3-214ENST00000582717 SPAG9O60271 1321 aaKnown RBP18.75■□□□□ 0.59
GGA3-214ENST00000582717 RTEL1-TNFRSF6BF6WH68 1400 aa18.74■□□□□ 0.59
GGA3-214ENST00000582717 RALGAPBQ86X10 1494 aa18.74■□□□□ 0.59
GGA3-214ENST00000582717 CNTLNQ9NXG0 1405 aa18.74■□□□□ 0.59
GGA3-214ENST00000582717 KDM5CP41229 1560 aa18.74■□□□□ 0.59
GGA3-214ENST00000582717 INO80Q9ULG1 1556 aaPredicted RBP18.73■□□□□ 0.59
GGA3-214ENST00000582717 HNRNPUQ00839 825 aaKnown RBP eCLIP18.72■□□□□ 0.59
GGA3-214ENST00000582717 CCDC144AA2RUR9 1427 aa18.72■□□□□ 0.59
GGA3-214ENST00000582717 USP47Q96K76 1375 aa18.72■□□□□ 0.59
GGA3-214ENST00000582717 ATP7AQ04656 1500 aa18.71■□□□□ 0.59
GGA3-214ENST00000582717 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
GGA3-214ENST00000582717 BCORL1Q5H9F3 1711 aa18.71■□□□□ 0.59
GGA3-214ENST00000582717 KIF7Q2M1P5 1343 aa18.7■□□□□ 0.58
GGA3-214ENST00000582717 KDM2AQ9Y2K7 1162 aa18.69■□□□□ 0.58
GGA3-214ENST00000582717 DCAF11Q8TEB1 546 aa18.69■□□□□ 0.58
GGA3-214ENST00000582717 SCAPERQ9BY12 1400 aa18.68■□□□□ 0.58
GGA3-214ENST00000582717 DEPDC5O75140 1603 aa18.68■□□□□ 0.58
GGA3-214ENST00000582717 ATP10AO60312 1499 aa18.67■□□□□ 0.58
GGA3-214ENST00000582717 NPM1P06748 294 aaKnown RBP eCLIP18.66■□□□□ 0.58
GGA3-214ENST00000582717 E9PCH4 1651 aa18.66■□□□□ 0.58
GGA3-214ENST00000582717 A2MP01023 1474 aa18.65■□□□□ 0.58
GGA3-214ENST00000582717 MSH5O43196 834 aa18.65■□□□□ 0.58
GGA3-214ENST00000582717 TRPM1Q7Z4N2 1603 aa18.64■□□□□ 0.57
GGA3-214ENST00000582717 PRAG1Q86YV5 1406 aa18.63■□□□□ 0.57
GGA3-214ENST00000582717 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
GGA3-214ENST00000582717 PPP4R2Q9NY27 417 aa18.62■□□□□ 0.57
GGA3-214ENST00000582717 RGL3Q3MIN7 710 aa18.62■□□□□ 0.57
GGA3-214ENST00000582717 KIDINS220Q9ULH0 1771 aa18.61■□□□□ 0.57
GGA3-214ENST00000582717 EIF2AK4Q9P2K8 1649 aaKnown RBP18.6■□□□□ 0.57
GGA3-214ENST00000582717 VWDEQ8N2E2 1590 aa18.6■□□□□ 0.57
GGA3-214ENST00000582717 TET3O43151 1660 aa18.59■□□□□ 0.57
GGA3-214ENST00000582717 CD109Q6YHK3 1445 aa18.59■□□□□ 0.57
GGA3-214ENST00000582717 ROCK2O75116 1388 aaKnown RBP18.58■□□□□ 0.57
GGA3-214ENST00000582717 CFAP74Q9C0B2 1584 aa18.58■□□□□ 0.57
GGA3-214ENST00000582717 MROH1Q8NDA8 1641 aa18.58■□□□□ 0.57
GGA3-214ENST00000582717 SPHKAPQ2M3C7 1700 aa18.58■□□□□ 0.57
GGA3-214ENST00000582717 ZNF518AQ6AHZ1 1483 aa18.57■□□□□ 0.56
GGA3-214ENST00000582717 DHX29Q7Z478 1369 aaKnown RBP18.57■□□□□ 0.56
GGA3-214ENST00000582717 ERICH6Q7L0X2 663 aa18.57■□□□□ 0.56
GGA3-214ENST00000582717 MYT1LQ9UL68 1186 aa18.57■□□□□ 0.56
GGA3-214ENST00000582717 TRPM2O94759 1503 aa18.57■□□□□ 0.56
GGA3-214ENST00000582717 PRDM15P57071 1507 aaPredicted RBP18.56■□□□□ 0.56
GGA3-214ENST00000582717 PRKRIP1Q9H875 184 aaPredicted RBP18.56■□□□□ 0.56
GGA3-214ENST00000582717 KIF3BO15066 747 aa18.55■□□□□ 0.56
GGA3-214ENST00000582717 ARID4BQ4LE39 1312 aaPredicted RBP18.54■□□□□ 0.56
GGA3-214ENST00000582717 ZBED9Q6R2W3 1325 aa18.54■□□□□ 0.56
GGA3-214ENST00000582717 ST20-MTHFSA0A0A6YYL1 179 aa18.54■□□□□ 0.56
GGA3-214ENST00000582717 IRX6P78412 446 aaPredicted RBP18.54■□□□□ 0.56
GGA3-214ENST00000582717 CLTCL1P53675 1640 aa18.54■□□□□ 0.56
GGA3-214ENST00000582717 PTPRTO14522 1441 aa18.54■□□□□ 0.56
GGA3-214ENST00000582717 POGZQ7Z3K3 1410 aa18.54■□□□□ 0.56
GGA3-214ENST00000582717 CEP152O94986 1710 aa18.54■□□□□ 0.56
GGA3-214ENST00000582717 POLR3GLQ9BT43 218 aa18.53■□□□□ 0.56
GGA3-214ENST00000582717 KANK1Q14678 1352 aa18.53■□□□□ 0.56
GGA3-214ENST00000582717 LAMC1P11047 1609 aa18.53■□□□□ 0.56
GGA3-214ENST00000582717 GPRASP1Q5JY77 1395 aa18.53■□□□□ 0.56
GGA3-214ENST00000582717 NBPF1Q3BBV0 1214 aa18.52■□□□□ 0.56
GGA3-214ENST00000582717 CCDC184Q52MB2 194 aa18.52■□□□□ 0.56
GGA3-214ENST00000582717 HECW2Q9P2P5 1572 aa18.49■□□□□ 0.55
GGA3-214ENST00000582717 RNF17Q9BXT8 1623 aaKnown RBP18.49■□□□□ 0.55
GGA3-214ENST00000582717 FRMPD1Q5SYB0 1578 aa18.48■□□□□ 0.55
GGA3-214ENST00000582717 MADDQ8WXG6 1647 aa18.48■□□□□ 0.55
GGA3-214ENST00000582717 MLH3Q9UHC1 1453 aa18.48■□□□□ 0.55
GGA3-214ENST00000582717 EFCAB6Q5THR3 1501 aa18.47■□□□□ 0.55
GGA3-214ENST00000582717 PPRC1Q5VV67 1664 aaKnown RBP18.47■□□□□ 0.55
GGA3-214ENST00000582717 MRS2Q9HD23 443 aa18.46■□□□□ 0.55
GGA3-214ENST00000582717 ABCA6Q8N139 1617 aa18.46■□□□□ 0.55
GGA3-214ENST00000582717 NEO1Q92859 1461 aa18.46■□□□□ 0.55
GGA3-214ENST00000582717 UGGT1Q9NYU2 1555 aa18.44■□□□□ 0.54
GGA3-214ENST00000582717 RIMBP3CA6NJZ7 1639 aa18.43■□□□□ 0.54
GGA3-214ENST00000582717 RIMBP3BA6NNM3 1639 aa18.43■□□□□ 0.54
GGA3-214ENST00000582717 RIMBP3Q9UFD9 1639 aa18.43■□□□□ 0.54
GGA3-214ENST00000582717 MAP3K4Q9Y6R4 1608 aa18.43■□□□□ 0.54
GGA3-214ENST00000582717 LMTK2Q8IWU2 1503 aa18.43■□□□□ 0.54
GGA3-214ENST00000582717 FAM9BQ8IZU0 186 aa18.42■□□□□ 0.54
GGA3-214ENST00000582717 CYB5RLQ6IPT4 315 aa18.42■□□□□ 0.54
GGA3-214ENST00000582717 COL17A1Q9UMD9 1497 aaPredicted RBP18.4■□□□□ 0.54
GGA3-214ENST00000582717 NEURL4Q96JN8 1562 aa18.4■□□□□ 0.54
GGA3-214ENST00000582717 SMG6Q86US8 1419 aaKnown RBP18.39■□□□□ 0.53
GGA3-214ENST00000582717 RICTORQ6R327 1708 aa18.39■□□□□ 0.53
GGA3-214ENST00000582717 RAPGEF3O95398 923 aa18.39■□□□□ 0.53
GGA3-214ENST00000582717 CNGB1Q14028 1251 aaPredicted RBP18.39■□□□□ 0.53
GGA3-214ENST00000582717 TESK2Q96S53 571 aa18.39■□□□□ 0.53
GGA3-214ENST00000582717 IQGAP1P46940 1657 aa18.39■□□□□ 0.53
GGA3-214ENST00000582717 KIF1BO60333 1816 aa18.38■□□□□ 0.53
GGA3-214ENST00000582717 MROH2AA6NES4 1674 aa18.38■□□□□ 0.53
GGA3-214ENST00000582717 B4GALNT3Q6L9W6 998 aa18.38■□□□□ 0.53
GGA3-214ENST00000582717 DISP3Q9P2K9 1392 aa18.38■□□□□ 0.53
GGA3-214ENST00000582717 DIP2CQ9Y2E4 1556 aa18.37■□□□□ 0.53
GGA3-214ENST00000582717 GLI2P10070 1586 aa18.37■□□□□ 0.53
GGA3-214ENST00000582717 IFT172Q9UG01 1749 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms