RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 ANKLE2Q86XL3 938 aa14.42□□□□□ -0.1
CDK5RAP3-224ENST00000582275 CASKIN1Q8WXD9 1431 aa14.41□□□□□ -0.1
CDK5RAP3-224ENST00000582275 HNRNPMP52272 730 aaKnown RBP eCLIP14.41□□□□□ -0.1
CDK5RAP3-224ENST00000582275 POLR1AO95602 1720 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-224ENST00000582275 LRRIQ1Q96JM4 1722 aa14.41□□□□□ -0.1
CDK5RAP3-224ENST00000582275 INO80Q9ULG1 1556 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-224ENST00000582275 TNRQ92752 1358 aa14.39□□□□□ -0.11
CDK5RAP3-224ENST00000582275 THEMISQ8N1K5 641 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-224ENST00000582275 CFDP1Q9UEE9 299 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-224ENST00000582275 NEURL4Q96JN8 1562 aa14.38□□□□□ -0.11
CDK5RAP3-224ENST00000582275 GPATCH8Q9UKJ3 1502 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-224ENST00000582275 ADGBQ8N7X0 1667 aa14.36□□□□□ -0.11
CDK5RAP3-224ENST00000582275 FAM135AQ9P2D6 1515 aa14.36□□□□□ -0.11
CDK5RAP3-224ENST00000582275 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-224ENST00000582275 MED14O60244 1454 aa14.35□□□□□ -0.11
CDK5RAP3-224ENST00000582275 VWDEQ8N2E2 1590 aa14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 NPHP4O75161 1426 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 PZPP20742 1482 aa14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 NLRP1Q9C000 1473 aa14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 CCNB3Q8WWL7 1395 aa14.34□□□□□ -0.11
CDK5RAP3-224ENST00000582275 DEPDC5O75140 1603 aa14.33□□□□□ -0.11
CDK5RAP3-224ENST00000582275 FYCO1Q9BQS8 1478 aa14.33□□□□□ -0.12
CDK5RAP3-224ENST00000582275 RNF216Q9NWF9 866 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-224ENST00000582275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDK5RAP3-224ENST00000582275 RTEL1-TNFRSF6BF6WH68 1400 aa14.32□□□□□ -0.12
CDK5RAP3-224ENST00000582275 DHX29Q7Z478 1369 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-224ENST00000582275 ALKQ9UM73 1620 aa14.31□□□□□ -0.12
CDK5RAP3-224ENST00000582275 HOXD11P31277 338 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-224ENST00000582275 MIA2Q96PC5 1412 aa14.31□□□□□ -0.12
CDK5RAP3-224ENST00000582275 KDM5DQ9BY66 1539 aa14.31□□□□□ -0.12
CDK5RAP3-224ENST00000582275 UGGT1Q9NYU2 1555 aa14.3□□□□□ -0.12
CDK5RAP3-224ENST00000582275 RNF17Q9BXT8 1623 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-224ENST00000582275 FBXO31Q5XUX0 539 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-224ENST00000582275 SYNMO15061 1565 aa14.3□□□□□ -0.12
CDK5RAP3-224ENST00000582275 KIF3BO15066 747 aa14.29□□□□□ -0.12
CDK5RAP3-224ENST00000582275 WASHC2CQ9Y4E1 1318 aa14.29□□□□□ -0.12
CDK5RAP3-224ENST00000582275 IQGAP1P46940 1657 aa14.28□□□□□ -0.12
CDK5RAP3-224ENST00000582275 LRRC7Q96NW7 1537 aa14.28□□□□□ -0.12
CDK5RAP3-224ENST00000582275 RGS17Q9UGC6 210 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-224ENST00000582275 MTUS2Q5JR59 1369 aa14.25□□□□□ -0.13
CDK5RAP3-224ENST00000582275 RSPH4AQ5TD94 716 aa14.25□□□□□ -0.13
CDK5RAP3-224ENST00000582275 MBD5Q9P267 1494 aa14.24□□□□□ -0.13
CDK5RAP3-224ENST00000582275 FAM135BQ49AJ0 1406 aa14.21□□□□□ -0.13
CDK5RAP3-224ENST00000582275 ZNF644Q9H582 1327 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-224ENST00000582275 STRCP1A6NGW2 1772 aa14.19□□□□□ -0.14
CDK5RAP3-224ENST00000582275 CCDC141Q6ZP82 1450 aa14.19□□□□□ -0.14
CDK5RAP3-224ENST00000582275 POTEAQ6S8J7 498 aa14.19□□□□□ -0.14
CDK5RAP3-224ENST00000582275 SCAF11Q99590 1463 aaKnown RBP14.18□□□□□ -0.14
CDK5RAP3-224ENST00000582275 TIAM1Q13009 1591 aa14.17□□□□□ -0.14
CDK5RAP3-224ENST00000582275 ZC3H13Q5T200 1668 aaKnown RBP14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 TSPY4P0CV99 314 aa14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 TSPY10P0CW01 314 aa14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 EID1Q9Y6B2 187 aa14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 EHBP1L1Q8N3D4 1523 aa14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
CDK5RAP3-224ENST00000582275 TXNDC2Q86VQ3 553 aa14.14□□□□□ -0.15
CDK5RAP3-224ENST00000582275 ERVK-7P63135 1459 aa14.13□□□□□ -0.15
CDK5RAP3-224ENST00000582275 LRRC9Q6ZRR7 1453 aa14.12□□□□□ -0.15
CDK5RAP3-224ENST00000582275 ABCC3O15438 1527 aa14.11□□□□□ -0.15
CDK5RAP3-224ENST00000582275 SLIT1O75093 1534 aa14.11□□□□□ -0.15
CDK5RAP3-224ENST00000582275 ARHGAP23Q9P227 1491 aa14.11□□□□□ -0.15
CDK5RAP3-224ENST00000582275 CAMSAP2Q08AD1 1489 aa14.1□□□□□ -0.15
CDK5RAP3-224ENST00000582275 UBR1Q8IWV7 1749 aa14.1□□□□□ -0.15
CDK5RAP3-224ENST00000582275 LTKP29376 864 aa14.09□□□□□ -0.15
CDK5RAP3-224ENST00000582275 ARHGEF5Q12774 1597 aa14.09□□□□□ -0.15
CDK5RAP3-224ENST00000582275 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
CDK5RAP3-224ENST00000582275 XIRP1Q702N8 1843 aaKnown RBP14.08□□□□□ -0.16
CDK5RAP3-224ENST00000582275 JCADQ9P266 1359 aa14.08□□□□□ -0.16
CDK5RAP3-224ENST00000582275 NCOA2Q15596 1464 aa14.07□□□□□ -0.16
CDK5RAP3-224ENST00000582275 KCNA6P17658 529 aa14.07□□□□□ -0.16
CDK5RAP3-224ENST00000582275 EIF2AK4Q9P2K8 1649 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-224ENST00000582275 ROBO1Q9Y6N7 1651 aa14.06□□□□□ -0.16
CDK5RAP3-224ENST00000582275 ZNF772Q68DY9 489 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-224ENST00000582275 PROSER2Q86WR7 435 aaPredicted RBP14.05□□□□□ -0.16
CDK5RAP3-224ENST00000582275 UPF1Q92900 1129 aaKnown RBP eCLIP14.05□□□□□ -0.16
CDK5RAP3-224ENST00000582275 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
CDK5RAP3-224ENST00000582275 MSH6P52701 1360 aa14.04□□□□□ -0.16
CDK5RAP3-224ENST00000582275 TMEM2Q9UHN6 1383 aa14.04□□□□□ -0.16
CDK5RAP3-224ENST00000582275 ARHGAP31Q2M1Z3 1444 aa14.04□□□□□ -0.16
CDK5RAP3-224ENST00000582275 SETD1AO15047 1707 aaKnown RBP14.04□□□□□ -0.16
CDK5RAP3-224ENST00000582275 CFAP65Q6ZU64 1925 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-224ENST00000582275 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.16
CDK5RAP3-224ENST00000582275 NKTRP30414 1462 aaKnown RBP14.02□□□□□ -0.16
CDK5RAP3-224ENST00000582275 SPATA31A6Q5VVP1 1343 aa14.02□□□□□ -0.17
CDK5RAP3-224ENST00000582275 PRDM15P57071 1507 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-224ENST00000582275 MAP3K1Q13233 1512 aa14.01□□□□□ -0.17
CDK5RAP3-224ENST00000582275 DCAF8L1A6NGE4 600 aa14.01□□□□□ -0.17
CDK5RAP3-224ENST00000582275 MEX3CQ5U5Q3 659 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-224ENST00000582275 SLAIN2Q9P270 581 aa14.01□□□□□ -0.17
CDK5RAP3-224ENST00000582275 FGD6Q6ZV73 1430 aa14□□□□□ -0.17
CDK5RAP3-224ENST00000582275 PHLPP1O60346 1717 aa14□□□□□ -0.17
CDK5RAP3-224ENST00000582275 CEP152O94986 1710 aa13.99□□□□□ -0.17
CDK5RAP3-224ENST00000582275 MROH1Q8NDA8 1641 aa13.99□□□□□ -0.17
CDK5RAP3-224ENST00000582275 KDM5AP29375 1690 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-224ENST00000582275 EFCAB6Q5THR3 1501 aa13.98□□□□□ -0.17
CDK5RAP3-224ENST00000582275 DUOX2Q9NRD8 1548 aa13.98□□□□□ -0.17
CDK5RAP3-224ENST00000582275 TRIM52Q96A61 297 aa13.97□□□□□ -0.17
CDK5RAP3-224ENST00000582275 CDK12Q9NYV4 1490 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-224ENST00000582275 RXRBP28702 533 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms