RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 DUOX2Q9NRD8 1548 aa19.21■□□□□ 0.67
SMARCD2-209ENST00000581832 FAM135AQ9P2D6 1515 aa19.21■□□□□ 0.67
SMARCD2-209ENST00000581832 UHRF1BP1Q6BDS2 1440 aa19.21■□□□□ 0.67
SMARCD2-209ENST00000581832 MROH1Q8NDA8 1641 aa19.2■□□□□ 0.66
SMARCD2-209ENST00000581832 KIF15Q9NS87 1388 aa19.19■□□□□ 0.66
SMARCD2-209ENST00000581832 RRP7BPQ9NSQ0 103 aa19.19■□□□□ 0.66
SMARCD2-209ENST00000581832 KDM5DQ9BY66 1539 aa19.19■□□□□ 0.66
SMARCD2-209ENST00000581832 NCOA1Q15788 1441 aa19.18■□□□□ 0.66
SMARCD2-209ENST00000581832 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
SMARCD2-209ENST00000581832 CHIC2Q9UKJ5 165 aa19.17■□□□□ 0.66
SMARCD2-209ENST00000581832 STRCQ7RTU9 1775 aa19.16■□□□□ 0.66
SMARCD2-209ENST00000581832 ADGRL2O95490 1459 aa19.16■□□□□ 0.66
SMARCD2-209ENST00000581832 FAM50AQ14320 339 aaKnown RBP19.16■□□□□ 0.66
SMARCD2-209ENST00000581832 WASHC2CQ9Y4E1 1318 aa19.16■□□□□ 0.66
SMARCD2-209ENST00000581832 ERBINQ96RT1 1412 aa19.16■□□□□ 0.66
SMARCD2-209ENST00000581832 ANKRD30AQ9BXX3 1397 aa19.15■□□□□ 0.66
SMARCD2-209ENST00000581832 PZPP20742 1482 aa19.15■□□□□ 0.66
SMARCD2-209ENST00000581832 FBXO31Q5XUX0 539 aaPredicted RBP19.14■□□□□ 0.65
SMARCD2-209ENST00000581832 ABCC3O15438 1527 aa19.14■□□□□ 0.65
SMARCD2-209ENST00000581832 ZC3H13Q5T200 1668 aaKnown RBP19.11■□□□□ 0.65
SMARCD2-209ENST00000581832 DEPDC5O75140 1603 aa19.11■□□□□ 0.65
SMARCD2-209ENST00000581832 MYO3AQ8NEV4 1616 aa19.11■□□□□ 0.65
SMARCD2-209ENST00000581832 ZNF142P52746 1687 aaPredicted RBP19.11■□□□□ 0.65
SMARCD2-209ENST00000581832 PRDM15P57071 1507 aaPredicted RBP19.1■□□□□ 0.65
SMARCD2-209ENST00000581832 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.1■□□□□ 0.65
SMARCD2-209ENST00000581832 CEP152O94986 1710 aa19.09■□□□□ 0.65
SMARCD2-209ENST00000581832 CFAP65Q6ZU64 1925 aaKnown RBP19.08■□□□□ 0.64
SMARCD2-209ENST00000581832 CEP170BQ9Y4F5 1589 aaPredicted RBP19.07■□□□□ 0.64
SMARCD2-209ENST00000581832 TNRQ92752 1358 aa19.06■□□□□ 0.64
SMARCD2-209ENST00000581832 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
SMARCD2-209ENST00000581832 CAMSAP1Q5T5Y3 1602 aa19.05■□□□□ 0.64
SMARCD2-209ENST00000581832 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
SMARCD2-209ENST00000581832 ARHGAP31Q2M1Z3 1444 aa19.04■□□□□ 0.64
SMARCD2-209ENST00000581832 SPATA31D1Q6ZQQ2 1576 aa19.04■□□□□ 0.64
SMARCD2-209ENST00000581832 RRBP1Q9P2E9 1410 aaKnown RBP19.04■□□□□ 0.64
SMARCD2-209ENST00000581832 ROCK1Q13464 1354 aa19.04■□□□□ 0.64
SMARCD2-209ENST00000581832 ANKRD50Q9ULJ7 1429 aa19.03■□□□□ 0.64
SMARCD2-209ENST00000581832 LMTK2Q8IWU2 1503 aa19.02■□□□□ 0.64
SMARCD2-209ENST00000581832 ERVK-7P63135 1459 aa19.02■□□□□ 0.63
SMARCD2-209ENST00000581832 PLA2R1Q13018 1463 aa19.02■□□□□ 0.63
SMARCD2-209ENST00000581832 PTPRTO14522 1441 aa19.01■□□□□ 0.63
SMARCD2-209ENST00000581832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.01■□□□□ 0.636e-8■■■□□ 16.3
SMARCD2-209ENST00000581832 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
SMARCD2-209ENST00000581832 NLRP1Q9C000 1473 aa18.99■□□□□ 0.63
SMARCD2-209ENST00000581832 NCKAP5LQ9HCH0 1330 aa18.98■□□□□ 0.63
SMARCD2-209ENST00000581832 KANK1Q14678 1352 aa18.97■□□□□ 0.63
SMARCD2-209ENST00000581832 ITGAEP38570 1179 aa18.95■□□□□ 0.62
SMARCD2-209ENST00000581832 PKD2Q13563 968 aa18.95■□□□□ 0.62
SMARCD2-209ENST00000581832 ILDR1Q86SU0 546 aaPredicted RBP18.95■□□□□ 0.62
SMARCD2-209ENST00000581832 UGGT1Q9NYU2 1555 aa18.94■□□□□ 0.62
SMARCD2-209ENST00000581832 UNC13BO14795 1591 aa18.93■□□□□ 0.62
SMARCD2-209ENST00000581832 EFCAB6Q5THR3 1501 aa18.92■□□□□ 0.62
SMARCD2-209ENST00000581832 THEMISQ8N1K5 641 aaPredicted RBP18.91■□□□□ 0.62
SMARCD2-209ENST00000581832 NOS1P29475 1434 aa18.91■□□□□ 0.62
SMARCD2-209ENST00000581832 NEURL4Q96JN8 1562 aa18.9■□□□□ 0.62
SMARCD2-209ENST00000581832 UBR1Q8IWV7 1749 aa18.9■□□□□ 0.62
SMARCD2-209ENST00000581832 POLR1AO95602 1720 aaPredicted RBP18.89■□□□□ 0.61
SMARCD2-209ENST00000581832 LTBP4Q8N2S1 1624 aa18.89■□□□□ 0.61
SMARCD2-209ENST00000581832 TET3O43151 1660 aa18.89■□□□□ 0.61
SMARCD2-209ENST00000581832 CERKQ8TCT0 537 aa18.88■□□□□ 0.61
SMARCD2-209ENST00000581832 SYNMO15061 1565 aa18.88■□□□□ 0.61
SMARCD2-209ENST00000581832 RPRD2Q5VT52 1461 aaKnown RBP18.87■□□□□ 0.61
SMARCD2-209ENST00000581832 GCC2Q8IWJ2 1684 aa18.86■□□□□ 0.61
SMARCD2-209ENST00000581832 IQGAP3Q86VI3 1631 aa18.86■□□□□ 0.61
SMARCD2-209ENST00000581832 IDI1Q13907 227 aa18.86■□□□□ 0.61
SMARCD2-209ENST00000581832 ANKLE2Q86XL3 938 aa18.86■□□□□ 0.61
SMARCD2-209ENST00000581832 FBXO41Q8TF61 875 aa18.86■□□□□ 0.61
SMARCD2-209ENST00000581832 MED14O60244 1454 aa18.85■□□□□ 0.61
SMARCD2-209ENST00000581832 NAIPQ13075 1403 aa18.85■□□□□ 0.61
SMARCD2-209ENST00000581832 PIK3C2BO00750 1634 aa18.85■□□□□ 0.61
SMARCD2-209ENST00000581832 ARHGAP23Q9P227 1491 aa18.84■□□□□ 0.61
SMARCD2-209ENST00000581832 E9PCH4 1651 aa18.83■□□□□ 0.61
SMARCD2-209ENST00000581832 KDM5AP29375 1690 aaKnown RBP18.82■□□□□ 0.6
SMARCD2-209ENST00000581832 NUP155O75694 1391 aa18.82■□□□□ 0.6
SMARCD2-209ENST00000581832 SLIT1O75093 1534 aa18.82■□□□□ 0.6
SMARCD2-209ENST00000581832 ZNF335Q9H4Z2 1342 aaPredicted RBP18.81■□□□□ 0.6
SMARCD2-209ENST00000581832 LTKP29376 864 aa18.8■□□□□ 0.6
SMARCD2-209ENST00000581832 SLC52A1Q9NWF4 448 aa18.8■□□□□ 0.6
SMARCD2-209ENST00000581832 HFM1A2PYH4 1435 aa18.8■□□□□ 0.6
SMARCD2-209ENST00000581832 NPHP4O75161 1426 aaPredicted RBP18.79■□□□□ 0.6
SMARCD2-209ENST00000581832 IQGAP1P46940 1657 aa18.77■□□□□ 0.6
SMARCD2-209ENST00000581832 TMEM2Q9UHN6 1383 aa18.77■□□□□ 0.6
SMARCD2-209ENST00000581832 SCAF11Q99590 1463 aaKnown RBP18.76■□□□□ 0.59
SMARCD2-209ENST00000581832 MYO5BQ9ULV0 1848 aa18.75■□□□□ 0.59
SMARCD2-209ENST00000581832 ADGRB3O60242 1522 aa18.74■□□□□ 0.59
SMARCD2-209ENST00000581832 TXNDC2Q86VQ3 553 aa18.74■□□□□ 0.59
SMARCD2-209ENST00000581832 IQSEC2Q5JU85 1478 aa18.73■□□□□ 0.59
SMARCD2-209ENST00000581832 TMEM131LA2VDJ0 1609 aa18.73■□□□□ 0.59
SMARCD2-209ENST00000581832 STAG3Q9UJ98 1225 aa18.72■□□□□ 0.59
SMARCD2-209ENST00000581832 STRCP1A6NGW2 1772 aa18.7■□□□□ 0.58
SMARCD2-209ENST00000581832 ZFYVE9O95405 1425 aa18.69■□□□□ 0.58
SMARCD2-209ENST00000581832 EID1Q9Y6B2 187 aa18.69■□□□□ 0.58
SMARCD2-209ENST00000581832 SPHKAPQ2M3C7 1700 aa18.69■□□□□ 0.58
SMARCD2-209ENST00000581832 CPS1P31327 1500 aa18.67■□□□□ 0.58
SMARCD2-209ENST00000581832 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
SMARCD2-209ENST00000581832 RIMS2Q9UQ26 1411 aa18.63■□□□□ 0.57
SMARCD2-209ENST00000581832 TRPM2O94759 1503 aa18.61■□□□□ 0.57
SMARCD2-209ENST00000581832 LRRC7Q96NW7 1537 aa18.6■□□□□ 0.57
SMARCD2-209ENST00000581832 PLEKHG1Q9ULL1 1385 aa18.6■□□□□ 0.57
SMARCD2-209ENST00000581832 CLTCL1P53675 1640 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms