RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 ZMYM3Q14202 1370 aa14.03□□□□□ -0.16
NUP85-217ENST00000581335 PLXNC1O60486 1568 aa14.03□□□□□ -0.16
NUP85-217ENST00000581335 ADGBQ8N7X0 1667 aa14.03□□□□□ -0.16
NUP85-217ENST00000581335 CLTCQ00610 1675 aaKnown RBP14.02□□□□□ -0.16
NUP85-217ENST00000581335 MBD5Q9P267 1494 aa14.01□□□□□ -0.17
NUP85-217ENST00000581335 NPATQ14207 1427 aa14.01□□□□□ -0.17
NUP85-217ENST00000581335 PTPRTO14522 1441 aa14□□□□□ -0.17
NUP85-217ENST00000581335 GGT6Q6P531 493 aa13.99□□□□□ -0.17
NUP85-217ENST00000581335 ZNF219Q9P2Y4 722 aaPredicted RBP13.99□□□□□ -0.17
NUP85-217ENST00000581335 RTEL1-TNFRSF6BF6WH68 1400 aa13.98□□□□□ -0.17
NUP85-217ENST00000581335 NCOA2Q15596 1464 aa13.97□□□□□ -0.17
NUP85-217ENST00000581335 NCOA1Q15788 1441 aa13.97□□□□□ -0.17
NUP85-217ENST00000581335 RSPH4AQ5TD94 716 aa13.96□□□□□ -0.17
NUP85-217ENST00000581335 CAMSAP1Q5T5Y3 1602 aa13.96□□□□□ -0.17
NUP85-217ENST00000581335 DHX29Q7Z478 1369 aaKnown RBP13.96□□□□□ -0.18
NUP85-217ENST00000581335 PTPRKQ15262 1439 aa13.95□□□□□ -0.18
NUP85-217ENST00000581335 LOC105371045A0A1W2PR82 267 aa13.94□□□□□ -0.18
NUP85-217ENST00000581335 ZNF142P52746 1687 aaPredicted RBP13.94□□□□□ -0.18
NUP85-217ENST00000581335 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
NUP85-217ENST00000581335 CAMSAP2Q08AD1 1489 aa13.93□□□□□ -0.18
NUP85-217ENST00000581335 CCDC141Q6ZP82 1450 aa13.93□□□□□ -0.18
NUP85-217ENST00000581335 LTBP4Q8N2S1 1624 aa13.92□□□□□ -0.18
NUP85-217ENST00000581335 VPS8Q8N3P4 1428 aa13.91□□□□□ -0.18
NUP85-217ENST00000581335 KIF3BO15066 747 aa13.91□□□□□ -0.18
NUP85-217ENST00000581335 CEP170BQ9Y4F5 1589 aaPredicted RBP13.91□□□□□ -0.18
NUP85-217ENST00000581335 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.18
NUP85-217ENST00000581335 TSPY4P0CV99 314 aa13.9□□□□□ -0.18
NUP85-217ENST00000581335 TSPY10P0CW01 314 aa13.9□□□□□ -0.18
NUP85-217ENST00000581335 LRRC9Q6ZRR7 1453 aa13.9□□□□□ -0.18
NUP85-217ENST00000581335 ARHGEF5Q12774 1597 aa13.9□□□□□ -0.18
NUP85-217ENST00000581335 PLA2R1Q13018 1463 aa13.89□□□□□ -0.19
NUP85-217ENST00000581335 PKD2Q13563 968 aa13.89□□□□□ -0.19
NUP85-217ENST00000581335 IQSEC2Q5JU85 1478 aa13.87□□□□□ -0.19
NUP85-217ENST00000581335 MAP3K1Q13233 1512 aa13.87□□□□□ -0.19
NUP85-217ENST00000581335 FAM135AQ9P2D6 1515 aa13.87□□□□□ -0.19
NUP85-217ENST00000581335 A2ML1A8K2U0 1454 aa13.87□□□□□ -0.19
NUP85-217ENST00000581335 TCOF1Q13428 1488 aaKnown RBP13.87□□□□□ -0.19
NUP85-217ENST00000581335 DNMT1P26358 1616 aaKnown RBP13.86□□□□□ -0.19
NUP85-217ENST00000581335 KDM5DQ9BY66 1539 aa13.86□□□□□ -0.19
NUP85-217ENST00000581335 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
NUP85-217ENST00000581335 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
NUP85-217ENST00000581335 FBXO31Q5XUX0 539 aaPredicted RBP13.85□□□□□ -0.19
NUP85-217ENST00000581335 PZPP20742 1482 aa13.85□□□□□ -0.19
NUP85-217ENST00000581335 MAST1Q9Y2H9 1570 aa13.84□□□□□ -0.19
NUP85-217ENST00000581335 ZNF335Q9H4Z2 1342 aaPredicted RBP13.84□□□□□ -0.19
NUP85-217ENST00000581335 TNRQ92752 1358 aa13.83□□□□□ -0.2
NUP85-217ENST00000581335 MIA2Q96PC5 1412 aa13.82□□□□□ -0.2
NUP85-217ENST00000581335 APLP2Q06481 763 aa13.82□□□□□ -0.2
NUP85-217ENST00000581335 MKRN4PQ13434 485 aaPredicted RBP13.82□□□□□ -0.2
NUP85-217ENST00000581335 RNF17Q9BXT8 1623 aaKnown RBP13.81□□□□□ -0.2
NUP85-217ENST00000581335 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
NUP85-217ENST00000581335 MYOM3Q5VTT5 1437 aa13.81□□□□□ -0.2
NUP85-217ENST00000581335 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
NUP85-217ENST00000581335 ZC3H13Q5T200 1668 aaKnown RBP13.79□□□□□ -0.2
NUP85-217ENST00000581335 THEMISQ8N1K5 641 aaPredicted RBP13.78□□□□□ -0.2
NUP85-217ENST00000581335 PROM2Q8N271 834 aa13.78□□□□□ -0.2
NUP85-217ENST00000581335 NLRP1Q9C000 1473 aa13.78□□□□□ -0.2
NUP85-217ENST00000581335 ANKLE2Q86XL3 938 aa13.77□□□□□ -0.21
NUP85-217ENST00000581335 NEURL4Q96JN8 1562 aa13.77□□□□□ -0.21
NUP85-217ENST00000581335 UGGT1Q9NYU2 1555 aa13.76□□□□□ -0.21
NUP85-217ENST00000581335 ABCC3O15438 1527 aa13.76□□□□□ -0.21
NUP85-217ENST00000581335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.76□□□□□ -0.21
NUP85-217ENST00000581335 DUOX2Q9NRD8 1548 aa13.75□□□□□ -0.21
NUP85-217ENST00000581335 DISP3Q9P2K9 1392 aa13.75□□□□□ -0.21
NUP85-217ENST00000581335 UBAP1LF5GYI3 381 aa13.75□□□□□ -0.21
NUP85-217ENST00000581335 CEP152O94986 1710 aa13.75□□□□□ -0.21
NUP85-217ENST00000581335 MROH1Q8NDA8 1641 aa13.75□□□□□ -0.21
NUP85-217ENST00000581335 SPATA31D1Q6ZQQ2 1576 aa13.75□□□□□ -0.21
NUP85-217ENST00000581335 SPDYE4A6NLX3 237 aa13.74□□□□□ -0.21
NUP85-217ENST00000581335 CROCC2H7BZ55 1655 aa13.74□□□□□ -0.21
NUP85-217ENST00000581335 PTPN23Q9H3S7 1636 aa13.74□□□□□ -0.21
NUP85-217ENST00000581335 CFAP65Q6ZU64 1925 aaKnown RBP13.74□□□□□ -0.21
NUP85-217ENST00000581335 DEPDC5O75140 1603 aa13.73□□□□□ -0.21
NUP85-217ENST00000581335 ABCC5O15440 1437 aa13.73□□□□□ -0.21
NUP85-217ENST00000581335 CPS1P31327 1500 aa13.72□□□□□ -0.21
NUP85-217ENST00000581335 MED14O60244 1454 aa13.72□□□□□ -0.21
NUP85-217ENST00000581335 ERVK-7P63135 1459 aa13.72□□□□□ -0.21
NUP85-217ENST00000581335 SHANK2Q9UPX8 1470 aa13.72□□□□□ -0.21
NUP85-217ENST00000581335 RRP7BPQ9NSQ0 103 aa13.71□□□□□ -0.21
NUP85-217ENST00000581335 KIF15Q9NS87 1388 aa13.71□□□□□ -0.22
NUP85-217ENST00000581335 NPHP4O75161 1426 aaPredicted RBP13.7□□□□□ -0.22
NUP85-217ENST00000581335 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
NUP85-217ENST00000581335 VWDEQ8N2E2 1590 aa13.7□□□□□ -0.22
NUP85-217ENST00000581335 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
NUP85-217ENST00000581335 ILDR2Q71H61 639 aa13.69□□□□□ -0.22
NUP85-217ENST00000581335 DAPK1P53355 1430 aa13.69□□□□□ -0.22
NUP85-217ENST00000581335 UBR1Q8IWV7 1749 aa13.69□□□□□ -0.22
NUP85-217ENST00000581335 PRDM15P57071 1507 aaPredicted RBP13.69□□□□□ -0.22
NUP85-217ENST00000581335 FGD6Q6ZV73 1430 aa13.68□□□□□ -0.22
NUP85-217ENST00000581335 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
NUP85-217ENST00000581335 ARHGAP31Q2M1Z3 1444 aa13.67□□□□□ -0.22
NUP85-217ENST00000581335 TOM1O60784 492 aa13.67□□□□□ -0.22
NUP85-217ENST00000581335 CHIC2Q9UKJ5 165 aa13.65□□□□□ -0.22
NUP85-217ENST00000581335 STRCP1A6NGW2 1772 aa13.65□□□□□ -0.22
NUP85-217ENST00000581335 KANK1Q14678 1352 aa13.64□□□□□ -0.23
NUP85-217ENST00000581335 ANKRD30AQ9BXX3 1397 aa13.64□□□□□ -0.23
NUP85-217ENST00000581335 PIP4K2BP78356 416 aa13.64□□□□□ -0.23
NUP85-217ENST00000581335 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
NUP85-217ENST00000581335 ARHGAP23Q9P227 1491 aa13.62□□□□□ -0.23
NUP85-217ENST00000581335 SOCS7O14512 581 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms