RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
NUP85-217ENST00000581335 AEBP2Q6ZN18 517 aaPredicted RBP22.39■■□□□ 1.17
NUP85-217ENST00000581335 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
NUP85-217ENST00000581335 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
NUP85-217ENST00000581335 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
NUP85-217ENST00000581335 ABCC9O60706 1549 aa19.67■□□□□ 0.74
NUP85-217ENST00000581335 RB1CC1Q8TDY2 1594 aa18.75■□□□□ 0.59
NUP85-217ENST00000581335 SENP3Q9H4L4 574 aaPredicted RBP18.73■□□□□ 0.59
NUP85-217ENST00000581335 NACADO15069 1562 aa18.62■□□□□ 0.57
NUP85-217ENST00000581335 DCAF8L2P0C7V8 631 aa18.53■□□□□ 0.56
NUP85-217ENST00000581335 PLPPR3Q6T4P5 718 aa18.53■□□□□ 0.56
NUP85-217ENST00000581335 DNAJC5BQ9UF47 199 aa18.46■□□□□ 0.55
NUP85-217ENST00000581335 MYO15BQ96JP2 1530 aa18.36■□□□□ 0.53
NUP85-217ENST00000581335 UNC13AQ9UPW8 1703 aa18.35■□□□□ 0.53
NUP85-217ENST00000581335 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
NUP85-217ENST00000581335 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
NUP85-217ENST00000581335 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
NUP85-217ENST00000581335 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
NUP85-217ENST00000581335 SHROOM4Q9ULL8 1493 aa17.94■□□□□ 0.46
NUP85-217ENST00000581335 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
NUP85-217ENST00000581335 CC2D2AQ9P2K1 1620 aa17.79■□□□□ 0.44
NUP85-217ENST00000581335 EIF4G1Q04637 1599 aaKnown RBP17.74■□□□□ 0.43
NUP85-217ENST00000581335 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
NUP85-217ENST00000581335 ADRA2BP18089 450 aa17.44■□□□□ 0.38
NUP85-217ENST00000581335 FOXD1Q16676 465 aa17.38■□□□□ 0.37
NUP85-217ENST00000581335 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
NUP85-217ENST00000581335 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
NUP85-217ENST00000581335 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
NUP85-217ENST00000581335 SMARCA4P51532 1647 aa17.11■□□□□ 0.33
NUP85-217ENST00000581335 SMARCA2P51531 1590 aa17.08■□□□□ 0.32
NUP85-217ENST00000581335 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
NUP85-217ENST00000581335 BAZ1AQ9NRL2 1556 aaPredicted RBP17.03■□□□□ 0.32
NUP85-217ENST00000581335 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
NUP85-217ENST00000581335 DNAJC5Q9H3Z4 198 aa16.96■□□□□ 0.31
NUP85-217ENST00000581335 CUX2O14529 1486 aa16.96■□□□□ 0.31
NUP85-217ENST00000581335 PEG3Q9GZU2 1588 aa16.95■□□□□ 0.3
NUP85-217ENST00000581335 BAZ1BQ9UIG0 1483 aaKnown RBP16.95■□□□□ 0.3
NUP85-217ENST00000581335 KCNA4P22459 653 aa16.94■□□□□ 0.3
NUP85-217ENST00000581335 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
NUP85-217ENST00000581335 NESP48681 1621 aa16.9■□□□□ 0.3
NUP85-217ENST00000581335 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
NUP85-217ENST00000581335 THOC2Q8NI27 1593 aaKnown RBP16.73■□□□□ 0.27
NUP85-217ENST00000581335 WIZO95785 1651 aa16.72■□□□□ 0.27
NUP85-217ENST00000581335 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
NUP85-217ENST00000581335 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
NUP85-217ENST00000581335 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
NUP85-217ENST00000581335 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
NUP85-217ENST00000581335 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
NUP85-217ENST00000581335 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
NUP85-217ENST00000581335 WDR62O43379 1518 aa16.5■□□□□ 0.23
NUP85-217ENST00000581335 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
NUP85-217ENST00000581335 CEP164Q9UPV0 1460 aa16.48■□□□□ 0.23
NUP85-217ENST00000581335 PIAS4Q8N2W9 510 aaPredicted RBP16.47■□□□□ 0.23
NUP85-217ENST00000581335 CFTRP13569 1480 aa16.47■□□□□ 0.23
NUP85-217ENST00000581335 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
NUP85-217ENST00000581335 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
NUP85-217ENST00000581335 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
NUP85-217ENST00000581335 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
NUP85-217ENST00000581335 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
NUP85-217ENST00000581335 OSCARQ8IYS5 282 aa16.21■□□□□ 0.19
NUP85-217ENST00000581335 TRIM41Q8WV44 630 aa16.2■□□□□ 0.18
NUP85-217ENST00000581335 SLC4A1APQ9BWU0 796 aaKnown RBP16.2■□□□□ 0.18
NUP85-217ENST00000581335 CSRNP3Q8WYN3 585 aa16.16■□□□□ 0.18
NUP85-217ENST00000581335 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
NUP85-217ENST00000581335 TOPBP1Q92547 1522 aa16.15■□□□□ 0.18
NUP85-217ENST00000581335 ABCC8Q09428 1581 aa16.14■□□□□ 0.17
NUP85-217ENST00000581335 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
NUP85-217ENST00000581335 ZNF608Q9ULD9 1512 aaPredicted RBP16.12■□□□□ 0.17
NUP85-217ENST00000581335 DNMBPQ6XZF7 1577 aa16.1■□□□□ 0.17
NUP85-217ENST00000581335 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
NUP85-217ENST00000581335 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
NUP85-217ENST00000581335 TARBP1Q13395 1621 aaKnown RBP16.02■□□□□ 0.16
NUP85-217ENST00000581335 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
NUP85-217ENST00000581335 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
NUP85-217ENST00000581335 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
NUP85-217ENST00000581335 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.15
NUP85-217ENST00000581335 POLA1P09884 1462 aaPredicted RBP15.98■□□□□ 0.15
NUP85-217ENST00000581335 CHD1O14646 1710 aa15.94■□□□□ 0.14
NUP85-217ENST00000581335 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
NUP85-217ENST00000581335 SOGA1O94964 1423 aa15.93■□□□□ 0.14
NUP85-217ENST00000581335 ARHGEF11O15085 1522 aa15.92■□□□□ 0.14
NUP85-217ENST00000581335 FGD5Q6ZNL6 1462 aa15.89■□□□□ 0.13
NUP85-217ENST00000581335 FBLN2P98095 1184 aa15.88■□□□□ 0.13
NUP85-217ENST00000581335 CUX1P39880 1505 aa15.88■□□□□ 0.13
NUP85-217ENST00000581335 TDRD9Q8NDG6 1382 aaKnown RBP15.87■□□□□ 0.13
NUP85-217ENST00000581335 WDR97A6NE52 1622 aa15.86■□□□□ 0.13
NUP85-217ENST00000581335 SUPT5HO00267 1087 aaKnown RBP15.82■□□□□ 0.12
NUP85-217ENST00000581335 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
NUP85-217ENST00000581335 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
NUP85-217ENST00000581335 CNKSR2Q8WXI2 1034 aa15.81■□□□□ 0.12
NUP85-217ENST00000581335 GRIN2BQ13224 1484 aa15.78■□□□□ 0.12
NUP85-217ENST00000581335 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
NUP85-217ENST00000581335 CHMP7Q8WUX9 453 aaPredicted RBP15.77■□□□□ 0.12
NUP85-217ENST00000581335 ARAP1Q96P48 1450 aa15.76■□□□□ 0.11
NUP85-217ENST00000581335 CLASP1Q7Z460 1538 aa15.74■□□□□ 0.11
NUP85-217ENST00000581335 PBRM1Q86U86 1689 aa15.74■□□□□ 0.11
NUP85-217ENST00000581335 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
NUP85-217ENST00000581335 GAPVD1Q14C86 1478 aa15.73■□□□□ 0.11
NUP85-217ENST00000581335 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
NUP85-217ENST00000581335 ABCA10Q8WWZ4 1543 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms