RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 SHANK2Q9UPX8 1470 aa26.41■■□□□ 1.82
CDC42EP4-206ENST00000581014 PTPN23Q9H3S7 1636 aa26.39■■□□□ 1.82
CDC42EP4-206ENST00000581014 DMRT2Q9Y5R5 561 aa26.38■■□□□ 1.81
CDC42EP4-206ENST00000581014 WASHC2CQ9Y4E1 1318 aa26.37■■□□□ 1.81
CDC42EP4-206ENST00000581014 KDM5DQ9BY66 1539 aa26.35■■□□□ 1.81
CDC42EP4-206ENST00000581014 DAPK1P53355 1430 aa26.35■■□□□ 1.81
CDC42EP4-206ENST00000581014 CAMSAP1Q5T5Y3 1602 aa26.34■■□□□ 1.81
CDC42EP4-206ENST00000581014 DUOX2Q9NRD8 1548 aa26.34■■□□□ 1.81
CDC42EP4-206ENST00000581014 CEP170BQ9Y4F5 1589 aaPredicted RBP26.32■■□□□ 1.8
CDC42EP4-206ENST00000581014 KIF15Q9NS87 1388 aa26.32■■□□□ 1.8
CDC42EP4-206ENST00000581014 NCOA1Q15788 1441 aa26.31■■□□□ 1.8
CDC42EP4-206ENST00000581014 PZPP20742 1482 aa26.31■■□□□ 1.8
CDC42EP4-206ENST00000581014 RNF17Q9BXT8 1623 aaKnown RBP26.31■■□□□ 1.8
CDC42EP4-206ENST00000581014 EIF2AK4Q9P2K8 1649 aaKnown RBP26.31■■□□□ 1.8
CDC42EP4-206ENST00000581014 DNMT1P26358 1616 aaKnown RBP26.3■■□□□ 1.8
CDC42EP4-206ENST00000581014 CERKQ8TCT0 537 aa26.29■■□□□ 1.8
CDC42EP4-206ENST00000581014 PTPRTO14522 1441 aa26.29■■□□□ 1.8
CDC42EP4-206ENST00000581014 ERBINQ96RT1 1412 aa26.28■■□□□ 1.8
CDC42EP4-206ENST00000581014 FBXO31Q5XUX0 539 aaPredicted RBP26.27■■□□□ 1.8
CDC42EP4-206ENST00000581014 RRP7BPQ9NSQ0 103 aa26.27■■□□□ 1.8
CDC42EP4-206ENST00000581014 CROCC2H7BZ55 1655 aa26.25■■□□□ 1.79
CDC42EP4-206ENST00000581014 ANKRD30AQ9BXX3 1397 aa26.25■■□□□ 1.79
CDC42EP4-206ENST00000581014 TNRQ92752 1358 aa26.24■■□□□ 1.79
CDC42EP4-206ENST00000581014 ABCC3O15438 1527 aa26.24■■□□□ 1.79
CDC42EP4-206ENST00000581014 A2ML1A8K2U0 1454 aa26.23■■□□□ 1.79
CDC42EP4-206ENST00000581014 PLA2R1Q13018 1463 aa26.23■■□□□ 1.79
CDC42EP4-206ENST00000581014 MROH1Q8NDA8 1641 aa26.21■■□□□ 1.79
CDC42EP4-206ENST00000581014 ZC3H13Q5T200 1668 aaKnown RBP26.2■■□□□ 1.78
CDC42EP4-206ENST00000581014 ADGRL2O95490 1459 aa26.2■■□□□ 1.78
CDC42EP4-206ENST00000581014 FAM50AQ14320 339 aaKnown RBP26.2■■□□□ 1.78
CDC42EP4-206ENST00000581014 POLR1AO95602 1720 aaPredicted RBP26.19■■□□□ 1.78
CDC42EP4-206ENST00000581014 PKD2Q13563 968 aa26.19■■□□□ 1.78
CDC42EP4-206ENST00000581014 CHIC2Q9UKJ5 165 aa26.19■■□□□ 1.78
CDC42EP4-206ENST00000581014 LTBP4Q8N2S1 1624 aa26.17■■□□□ 1.78
CDC42EP4-206ENST00000581014 PRDM15P57071 1507 aaPredicted RBP26.16■■□□□ 1.78
CDC42EP4-206ENST00000581014 CEP152O94986 1710 aa26.16■■□□□ 1.78
CDC42EP4-206ENST00000581014 NLRP1Q9C000 1473 aa26.16■■□□□ 1.78
CDC42EP4-206ENST00000581014 ARHGAP31Q2M1Z3 1444 aa26.15■■□□□ 1.78
CDC42EP4-206ENST00000581014 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.77
CDC42EP4-206ENST00000581014 SPATA31D1Q6ZQQ2 1576 aa26.12■■□□□ 1.77
CDC42EP4-206ENST00000581014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.11■■□□□ 1.77
CDC42EP4-206ENST00000581014 ERVK-7P63135 1459 aa26.11■■□□□ 1.77
CDC42EP4-206ENST00000581014 DEPDC5O75140 1603 aa26.1■■□□□ 1.77
CDC42EP4-206ENST00000581014 THEMISQ8N1K5 641 aaPredicted RBP26.1■■□□□ 1.77
CDC42EP4-206ENST00000581014 KANK1Q14678 1352 aa26.09■■□□□ 1.77
CDC42EP4-206ENST00000581014 CFAP65Q6ZU64 1925 aaKnown RBP26.08■■□□□ 1.77
CDC42EP4-206ENST00000581014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.07■■□□□ 1.76
CDC42EP4-206ENST00000581014 LMTK2Q8IWU2 1503 aa26.07■■□□□ 1.76
CDC42EP4-206ENST00000581014 ROCK1Q13464 1354 aa26.07■■□□□ 1.76
CDC42EP4-206ENST00000581014 ANKRD50Q9ULJ7 1429 aa26.06■■□□□ 1.76
CDC42EP4-206ENST00000581014 VWDEQ8N2E2 1590 aa26.06■■□□□ 1.76
CDC42EP4-206ENST00000581014 NEURL4Q96JN8 1562 aa26.05■■□□□ 1.76
CDC42EP4-206ENST00000581014 IQSEC2Q5JU85 1478 aa26.04■■□□□ 1.76
CDC42EP4-206ENST00000581014 UGGT1Q9NYU2 1555 aa26.03■■□□□ 1.76
CDC42EP4-206ENST00000581014 ANKLE2Q86XL3 938 aa26.02■■□□□ 1.76
CDC42EP4-206ENST00000581014 PPARGC1BQ86YN6 1023 aaKnown RBP26■■□□□ 1.75
CDC42EP4-206ENST00000581014 ZNF335Q9H4Z2 1342 aaPredicted RBP25.99■■□□□ 1.75
CDC42EP4-206ENST00000581014 MED14O60244 1454 aa25.96■■□□□ 1.75
CDC42EP4-206ENST00000581014 UBR1Q8IWV7 1749 aa25.94■■□□□ 1.74
CDC42EP4-206ENST00000581014 RRBP1Q9P2E9 1410 aaKnown RBP25.94■■□□□ 1.74
CDC42EP4-206ENST00000581014 IQGAP1P46940 1657 aa25.93■■□□□ 1.74
CDC42EP4-206ENST00000581014 NOS1P29475 1434 aa25.92■■□□□ 1.74
CDC42EP4-206ENST00000581014 EFCAB6Q5THR3 1501 aa25.92■■□□□ 1.74
CDC42EP4-206ENST00000581014 RPRD2Q5VT52 1461 aaKnown RBP25.9■■□□□ 1.74
CDC42EP4-206ENST00000581014 NPHP4O75161 1426 aaPredicted RBP25.88■■□□□ 1.73
CDC42EP4-206ENST00000581014 ARHGAP23Q9P227 1491 aa25.88■■□□□ 1.73
CDC42EP4-206ENST00000581014 SLC52A1Q9NWF4 448 aa25.88■■□□□ 1.73
CDC42EP4-206ENST00000581014 ITGAEP38570 1179 aa25.87■■□□□ 1.73
CDC42EP4-206ENST00000581014 IDI1Q13907 227 aa25.87■■□□□ 1.73
CDC42EP4-206ENST00000581014 SLIT1O75093 1534 aa25.86■■□□□ 1.73
CDC42EP4-206ENST00000581014 UNC13BO14795 1591 aa25.85■■□□□ 1.73
CDC42EP4-206ENST00000581014 CPS1P31327 1500 aa25.84■■□□□ 1.73
CDC42EP4-206ENST00000581014 PIK3C2BO00750 1634 aa25.83■■□□□ 1.73
CDC42EP4-206ENST00000581014 SYNMO15061 1565 aa25.82■■□□□ 1.72
CDC42EP4-206ENST00000581014 TMEM2Q9UHN6 1383 aa25.82■■□□□ 1.72
CDC42EP4-206ENST00000581014 SCAF11Q99590 1463 aaKnown RBP25.81■■□□□ 1.72
CDC42EP4-206ENST00000581014 LTKP29376 864 aa25.81■■□□□ 1.72
CDC42EP4-206ENST00000581014 STRCP1A6NGW2 1772 aa25.8■■□□□ 1.72
CDC42EP4-206ENST00000581014 TXNDC2Q86VQ3 553 aa25.8■■□□□ 1.72
CDC42EP4-206ENST00000581014 TET3O43151 1660 aa25.8■■□□□ 1.72
CDC42EP4-206ENST00000581014 STAG3Q9UJ98 1225 aa25.79■■□□□ 1.72
CDC42EP4-206ENST00000581014 EID1Q9Y6B2 187 aa25.79■■□□□ 1.72
CDC42EP4-206ENST00000581014 KDM5AP29375 1690 aaKnown RBP25.79■■□□□ 1.72
CDC42EP4-206ENST00000581014 NUP155O75694 1391 aa25.78■■□□□ 1.72
CDC42EP4-206ENST00000581014 UBAP1LF5GYI3 381 aa25.77■■□□□ 1.72
CDC42EP4-206ENST00000581014 IQGAP3Q86VI3 1631 aa25.74■■□□□ 1.71
CDC42EP4-206ENST00000581014 GCC2Q8IWJ2 1684 aa25.72■■□□□ 1.71
CDC42EP4-206ENST00000581014 ADGRB3O60242 1522 aa25.72■■□□□ 1.71
CDC42EP4-206ENST00000581014 NAIPQ13075 1403 aa25.71■■□□□ 1.71
CDC42EP4-206ENST00000581014 DISP3Q9P2K9 1392 aa25.69■■□□□ 1.7
CDC42EP4-206ENST00000581014 MYO5BQ9ULV0 1848 aa25.67■■□□□ 1.7
CDC42EP4-206ENST00000581014 HFM1A2PYH4 1435 aa25.67■■□□□ 1.7
CDC42EP4-206ENST00000581014 E9PCH4 1651 aa25.65■■□□□ 1.7
CDC42EP4-206ENST00000581014 ZFYVE9O95405 1425 aa25.63■■□□□ 1.69
CDC42EP4-206ENST00000581014 HDGFP51858 240 aaKnown RBP25.63■■□□□ 1.69
CDC42EP4-206ENST00000581014 XIRP1Q702N8 1843 aaKnown RBP25.63■■□□□ 1.69
CDC42EP4-206ENST00000581014 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
CDC42EP4-206ENST00000581014 LRRC7Q96NW7 1537 aa25.62■■□□□ 1.69
CDC42EP4-206ENST00000581014 SCAF1Q9H7N4 1312 aaKnown RBP25.62■■□□□ 1.69
CDC42EP4-206ENST00000581014 TMEM131LA2VDJ0 1609 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms