RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 MYO3AQ8NEV4 1616 aa26.76■■□□□ 1.87
EIF4A1-216ENST00000580888 MYOM3Q5VTT5 1437 aa26.75■■□□□ 1.87
EIF4A1-216ENST00000580888 PTPRTO14522 1441 aa26.73■■□□□ 1.87
EIF4A1-216ENST00000580888 NCOA1Q15788 1441 aa26.73■■□□□ 1.87
EIF4A1-216ENST00000580888 TSPY4P0CV99 314 aa26.7■■□□□ 1.86
EIF4A1-216ENST00000580888 TSPY10P0CW01 314 aa26.7■■□□□ 1.86
EIF4A1-216ENST00000580888 KDM5DQ9BY66 1539 aa26.7■■□□□ 1.86
EIF4A1-216ENST00000580888 FGD6Q6ZV73 1430 aa26.69■■□□□ 1.86
EIF4A1-216ENST00000580888 CAMSAP1Q5T5Y3 1602 aa26.68■■□□□ 1.86
EIF4A1-216ENST00000580888 CEP170BQ9Y4F5 1589 aaPredicted RBP26.68■■□□□ 1.86
EIF4A1-216ENST00000580888 CERKQ8TCT0 537 aa26.67■■□□□ 1.86
EIF4A1-216ENST00000580888 RNF17Q9BXT8 1623 aaKnown RBP26.67■■□□□ 1.86
EIF4A1-216ENST00000580888 EIF2AK4Q9P2K8 1649 aaKnown RBP26.66■■□□□ 1.86
EIF4A1-216ENST00000580888 KIF3BO15066 747 aa26.66■■□□□ 1.86
EIF4A1-216ENST00000580888 CROCC2H7BZ55 1655 aa26.63■■□□□ 1.85
EIF4A1-216ENST00000580888 PLA2R1Q13018 1463 aa26.63■■□□□ 1.85
EIF4A1-216ENST00000580888 PZPP20742 1482 aa26.62■■□□□ 1.85
EIF4A1-216ENST00000580888 ZC3H13Q5T200 1668 aaKnown RBP26.61■■□□□ 1.85
EIF4A1-216ENST00000580888 CCER1Q8TC90 406 aaPredicted RBP26.61■■□□□ 1.85
EIF4A1-216ENST00000580888 PTPN23Q9H3S7 1636 aa26.61■■□□□ 1.85
EIF4A1-216ENST00000580888 A2ML1A8K2U0 1454 aa26.59■■□□□ 1.85
EIF4A1-216ENST00000580888 TCOF1Q13428 1488 aaKnown RBP26.59■■□□□ 1.85
EIF4A1-216ENST00000580888 SHANK2Q9UPX8 1470 aa26.59■■□□□ 1.85
EIF4A1-216ENST00000580888 DNMT1P26358 1616 aaKnown RBP26.57■■□□□ 1.84
EIF4A1-216ENST00000580888 LTBP4Q8N2S1 1624 aa26.57■■□□□ 1.84
EIF4A1-216ENST00000580888 DUOX2Q9NRD8 1548 aa26.56■■□□□ 1.84
EIF4A1-216ENST00000580888 MROH1Q8NDA8 1641 aa26.56■■□□□ 1.84
EIF4A1-216ENST00000580888 WASHC2CQ9Y4E1 1318 aa26.55■■□□□ 1.84
EIF4A1-216ENST00000580888 ABCC3O15438 1527 aa26.54■■□□□ 1.84
EIF4A1-216ENST00000580888 TNRQ92752 1358 aa26.53■■□□□ 1.84
EIF4A1-216ENST00000580888 ABCC5O15440 1437 aa26.53■■□□□ 1.84
EIF4A1-216ENST00000580888 PKD2Q13563 968 aa26.52■■□□□ 1.84
EIF4A1-216ENST00000580888 FAM50AQ14320 339 aaKnown RBP26.51■■□□□ 1.83
EIF4A1-216ENST00000580888 POLR1AO95602 1720 aaPredicted RBP26.5■■□□□ 1.83
EIF4A1-216ENST00000580888 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
EIF4A1-216ENST00000580888 FBXO31Q5XUX0 539 aaPredicted RBP26.49■■□□□ 1.83
EIF4A1-216ENST00000580888 DAPK1P53355 1430 aa26.48■■□□□ 1.83
EIF4A1-216ENST00000580888 CEP152O94986 1710 aa26.48■■□□□ 1.83
EIF4A1-216ENST00000580888 NCKAP5LQ9HCH0 1330 aa26.48■■□□□ 1.83
EIF4A1-216ENST00000580888 NLRP1Q9C000 1473 aa26.48■■□□□ 1.83
EIF4A1-216ENST00000580888 SPATA31D1Q6ZQQ2 1576 aa26.47■■□□□ 1.83
EIF4A1-216ENST00000580888 ERBINQ96RT1 1412 aa26.47■■□□□ 1.83
EIF4A1-216ENST00000580888 KIF15Q9NS87 1388 aa26.46■■□□□ 1.83
EIF4A1-216ENST00000580888 PRDM15P57071 1507 aaPredicted RBP26.45■■□□□ 1.83
EIF4A1-216ENST00000580888 DEPDC5O75140 1603 aa26.45■■□□□ 1.82
EIF4A1-216ENST00000580888 SETD5Q9C0A6 1442 aa26.45■■□□□ 1.82
EIF4A1-216ENST00000580888 CLSPNQ9HAW4 1339 aa26.43■■□□□ 1.82
EIF4A1-216ENST00000580888 DHX57Q6P158 1386 aaKnown RBP26.42■■□□□ 1.82
EIF4A1-216ENST00000580888 NEURL4Q96JN8 1562 aa26.41■■□□□ 1.82
EIF4A1-216ENST00000580888 CFAP65Q6ZU64 1925 aaKnown RBP26.4■■□□□ 1.82
EIF4A1-216ENST00000580888 ITGAEP38570 1179 aa26.4■■□□□ 1.82
EIF4A1-216ENST00000580888 ERVK-7P63135 1459 aa26.4■■□□□ 1.82
EIF4A1-216ENST00000580888 UGGT1Q9NYU2 1555 aa26.39■■□□□ 1.82
EIF4A1-216ENST00000580888 RAB3GAP2Q9H2M9 1393 aa26.39■■□□□ 1.82
EIF4A1-216ENST00000580888 ARHGAP31Q2M1Z3 1444 aa26.37■■□□□ 1.81
EIF4A1-216ENST00000580888 ADGRL2O95490 1459 aa26.36■■□□□ 1.81
EIF4A1-216ENST00000580888 ANKRD30AQ9BXX3 1397 aa26.34■■□□□ 1.81
EIF4A1-216ENST00000580888 HFM1A2PYH4 1435 aa26.34■■□□□ 1.81
EIF4A1-216ENST00000580888 THEMISQ8N1K5 641 aaPredicted RBP26.34■■□□□ 1.81
EIF4A1-216ENST00000580888 RRP7BPQ9NSQ0 103 aa26.34■■□□□ 1.81
EIF4A1-216ENST00000580888 ZNF335Q9H4Z2 1342 aaPredicted RBP26.34■■□□□ 1.81
EIF4A1-216ENST00000580888 VWDEQ8N2E2 1590 aa26.33■■□□□ 1.8
EIF4A1-216ENST00000580888 MED14O60244 1454 aa26.32■■□□□ 1.8
EIF4A1-216ENST00000580888 UBR1Q8IWV7 1749 aa26.31■■□□□ 1.8
EIF4A1-216ENST00000580888 LMTK2Q8IWU2 1503 aa26.3■■□□□ 1.8
EIF4A1-216ENST00000580888 ANKLE2Q86XL3 938 aa26.28■■□□□ 1.8
EIF4A1-216ENST00000580888 IQGAP1P46940 1657 aa26.26■■□□□ 1.79
EIF4A1-216ENST00000580888 NAIPQ13075 1403 aa26.26■■□□□ 1.79
EIF4A1-216ENST00000580888 KANK1Q14678 1352 aa26.25■■□□□ 1.79
EIF4A1-216ENST00000580888 CHIC2Q9UKJ5 165 aa26.25■■□□□ 1.79
EIF4A1-216ENST00000580888 CPS1P31327 1500 aa26.24■■□□□ 1.79
EIF4A1-216ENST00000580888 NPHP4O75161 1426 aaPredicted RBP26.24■■□□□ 1.79
EIF4A1-216ENST00000580888 KDM5AP29375 1690 aaKnown RBP26.22■■□□□ 1.79
EIF4A1-216ENST00000580888 ROCK1Q13464 1354 aa26.21■■□□□ 1.79
EIF4A1-216ENST00000580888 GCC2Q8IWJ2 1684 aa26.21■■□□□ 1.79
EIF4A1-216ENST00000580888 SLIT1O75093 1534 aa26.2■■□□□ 1.79
EIF4A1-216ENST00000580888 EFCAB6Q5THR3 1501 aa26.19■■□□□ 1.78
EIF4A1-216ENST00000580888 ARHGAP23Q9P227 1491 aa26.19■■□□□ 1.78
EIF4A1-216ENST00000580888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.19■■□□□ 1.781e-9■□□□□ 10.4
EIF4A1-216ENST00000580888 PIK3C2BO00750 1634 aa26.18■■□□□ 1.78
EIF4A1-216ENST00000580888 ANKRD50Q9ULJ7 1429 aa26.16■■□□□ 1.78
EIF4A1-216ENST00000580888 SYNMO15061 1565 aa26.15■■□□□ 1.78
EIF4A1-216ENST00000580888 SCAF11Q99590 1463 aaKnown RBP26.14■■□□□ 1.78
EIF4A1-216ENST00000580888 NOS1P29475 1434 aa26.14■■□□□ 1.77
EIF4A1-216ENST00000580888 STRCP1A6NGW2 1772 aa26.13■■□□□ 1.77
EIF4A1-216ENST00000580888 UNC13BO14795 1591 aa26.12■■□□□ 1.77
EIF4A1-216ENST00000580888 TET3O43151 1660 aa26.12■■□□□ 1.77
EIF4A1-216ENST00000580888 RPRD2Q5VT52 1461 aaKnown RBP26.11■■□□□ 1.77
EIF4A1-216ENST00000580888 UBAP1LF5GYI3 381 aa26.1■■□□□ 1.77
EIF4A1-216ENST00000580888 ACIN1Q9UKV3 1341 aaKnown RBP26.1■■□□□ 1.77
EIF4A1-216ENST00000580888 TMEM2Q9UHN6 1383 aa26.06■■□□□ 1.76
EIF4A1-216ENST00000580888 LTKP29376 864 aa26.05■■□□□ 1.76
EIF4A1-216ENST00000580888 ADGRB3O60242 1522 aa26.04■■□□□ 1.76
EIF4A1-216ENST00000580888 IDI1Q13907 227 aa26.04■■□□□ 1.76
EIF4A1-216ENST00000580888 TXNDC2Q86VQ3 553 aa26.03■■□□□ 1.76
EIF4A1-216ENST00000580888 IQGAP3Q86VI3 1631 aa26.02■■□□□ 1.76
EIF4A1-216ENST00000580888 LRRC7Q96NW7 1537 aa26.01■■□□□ 1.75
EIF4A1-216ENST00000580888 ALKQ9UM73 1620 aa26■■□□□ 1.75
EIF4A1-216ENST00000580888 SLC52A1Q9NWF4 448 aa26■■□□□ 1.75
EIF4A1-216ENST00000580888 EID1Q9Y6B2 187 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms