RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 MIA2Q96PC5 1412 aa17.47■□□□□ 0.39
PPP4R1-218ENST00000580745 TNRQ92752 1358 aa17.45■□□□□ 0.38
PPP4R1-218ENST00000580745 CEP170BQ9Y4F5 1589 aaPredicted RBP17.44■□□□□ 0.38
PPP4R1-218ENST00000580745 ZNF335Q9H4Z2 1342 aaPredicted RBP17.44■□□□□ 0.38
PPP4R1-218ENST00000580745 MYO3AQ8NEV4 1616 aa17.43■□□□□ 0.38
PPP4R1-218ENST00000580745 KDM5DQ9BY66 1539 aa17.43■□□□□ 0.38
PPP4R1-218ENST00000580745 ABCC5O15440 1437 aa17.43■□□□□ 0.38
PPP4R1-218ENST00000580745 PZPP20742 1482 aa17.43■□□□□ 0.38
PPP4R1-218ENST00000580745 PKD2Q13563 968 aa17.42■□□□□ 0.38
PPP4R1-218ENST00000580745 RRP7BPQ9NSQ0 103 aa17.42■□□□□ 0.38
PPP4R1-218ENST00000580745 A2ML1A8K2U0 1454 aa17.42■□□□□ 0.38
PPP4R1-218ENST00000580745 LTBP4Q8N2S1 1624 aa17.41■□□□□ 0.38
PPP4R1-218ENST00000580745 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
PPP4R1-218ENST00000580745 PLA2R1Q13018 1463 aa17.4■□□□□ 0.38
PPP4R1-218ENST00000580745 TCOF1Q13428 1488 aaKnown RBP17.4■□□□□ 0.38
PPP4R1-218ENST00000580745 CHIC2Q9UKJ5 165 aa17.4■□□□□ 0.38
PPP4R1-218ENST00000580745 KIF15Q9NS87 1388 aa17.39■□□□□ 0.37
PPP4R1-218ENST00000580745 FGD6Q6ZV73 1430 aa17.38■□□□□ 0.37
PPP4R1-218ENST00000580745 ABCC3O15438 1527 aa17.37■□□□□ 0.37
PPP4R1-218ENST00000580745 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.37■□□□□ 0.371e-18■■■■□ 20.3
PPP4R1-218ENST00000580745 DAPK1P53355 1430 aa17.37■□□□□ 0.37
PPP4R1-218ENST00000580745 ZNF142P52746 1687 aaPredicted RBP17.36■□□□□ 0.37
PPP4R1-218ENST00000580745 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.372e-6■■□□□ 14.2
PPP4R1-218ENST00000580745 DNMT1P26358 1616 aaKnown RBP17.36■□□□□ 0.37
PPP4R1-218ENST00000580745 FAM135AQ9P2D6 1515 aa17.35■□□□□ 0.37
PPP4R1-218ENST00000580745 PTPN23Q9H3S7 1636 aa17.35■□□□□ 0.37
PPP4R1-218ENST00000580745 MROH1Q8NDA8 1641 aa17.33■□□□□ 0.37
PPP4R1-218ENST00000580745 DUOX2Q9NRD8 1548 aa17.33■□□□□ 0.37
PPP4R1-218ENST00000580745 RNF17Q9BXT8 1623 aaKnown RBP17.32■□□□□ 0.36
PPP4R1-218ENST00000580745 SHANK2Q9UPX8 1470 aa17.32■□□□□ 0.36
PPP4R1-218ENST00000580745 FAM50AQ14320 339 aaKnown RBP17.32■□□□□ 0.36
PPP4R1-218ENST00000580745 THEMISQ8N1K5 641 aaPredicted RBP17.32■□□□□ 0.36
PPP4R1-218ENST00000580745 ANKLE2Q86XL3 938 aa17.31■□□□□ 0.36
PPP4R1-218ENST00000580745 ERVK-7P63135 1459 aa17.31■□□□□ 0.36
PPP4R1-218ENST00000580745 NLRP1Q9C000 1473 aa17.31■□□□□ 0.36
PPP4R1-218ENST00000580745 ERBINQ96RT1 1412 aa17.29■□□□□ 0.36
PPP4R1-218ENST00000580745 UGGT1Q9NYU2 1555 aa17.28■□□□□ 0.36
PPP4R1-218ENST00000580745 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
PPP4R1-218ENST00000580745 EIF2AK4Q9P2K8 1649 aaKnown RBP17.28■□□□□ 0.36
PPP4R1-218ENST00000580745 SPATA31D1Q6ZQQ2 1576 aa17.28■□□□□ 0.36
PPP4R1-218ENST00000580745 NEURL4Q96JN8 1562 aa17.28■□□□□ 0.36
PPP4R1-218ENST00000580745 ANKRD30AQ9BXX3 1397 aa17.28■□□□□ 0.36
PPP4R1-218ENST00000580745 UBAP1LF5GYI3 381 aa17.27■□□□□ 0.36
PPP4R1-218ENST00000580745 NPHP4O75161 1426 aaPredicted RBP17.25■□□□□ 0.35
PPP4R1-218ENST00000580745 IQSEC2Q5JU85 1478 aa17.24■□□□□ 0.35
PPP4R1-218ENST00000580745 CROCC2H7BZ55 1655 aa17.23■□□□□ 0.35
PPP4R1-218ENST00000580745 PRDM15P57071 1507 aaPredicted RBP17.23■□□□□ 0.35
PPP4R1-218ENST00000580745 ARHGAP31Q2M1Z3 1444 aa17.22■□□□□ 0.35
PPP4R1-218ENST00000580745 LTKP29376 864 aa17.22■□□□□ 0.35
PPP4R1-218ENST00000580745 ZC3H13Q5T200 1668 aaKnown RBP17.22■□□□□ 0.35
PPP4R1-218ENST00000580745 CEP152O94986 1710 aa17.21■□□□□ 0.35
PPP4R1-218ENST00000580745 KANK1Q14678 1352 aa17.21■□□□□ 0.35
PPP4R1-218ENST00000580745 MED14O60244 1454 aa17.2■□□□□ 0.34
PPP4R1-218ENST00000580745 TXNDC2Q86VQ3 553 aa17.19■□□□□ 0.34
PPP4R1-218ENST00000580745 ADGRL2O95490 1459 aa17.18■□□□□ 0.34
PPP4R1-218ENST00000580745 IDI1Q13907 227 aa17.18■□□□□ 0.34
PPP4R1-218ENST00000580745 VWDEQ8N2E2 1590 aa17.18■□□□□ 0.34
PPP4R1-218ENST00000580745 DISP3Q9P2K9 1392 aa17.17■□□□□ 0.34
PPP4R1-218ENST00000580745 ITGAEP38570 1179 aa17.17■□□□□ 0.34
PPP4R1-218ENST00000580745 PIP4K2BP78356 416 aa17.17■□□□□ 0.34
PPP4R1-218ENST00000580745 ANKRD50Q9ULJ7 1429 aa17.17■□□□□ 0.34
PPP4R1-218ENST00000580745 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
PPP4R1-218ENST00000580745 STAG3Q9UJ98 1225 aa17.16■□□□□ 0.34
PPP4R1-218ENST00000580745 DEPDC5O75140 1603 aa17.15■□□□□ 0.34
PPP4R1-218ENST00000580745 POLR1AO95602 1720 aaPredicted RBP17.15■□□□□ 0.34
PPP4R1-218ENST00000580745 LMTK2Q8IWU2 1503 aa17.15■□□□□ 0.34
PPP4R1-218ENST00000580745 SCAF11Q99590 1463 aaKnown RBP17.14■□□□□ 0.33
PPP4R1-218ENST00000580745 ARHGAP23Q9P227 1491 aa17.14■□□□□ 0.33
PPP4R1-218ENST00000580745 CPS1P31327 1500 aa17.14■□□□□ 0.33
PPP4R1-218ENST00000580745 ILDR2Q71H61 639 aa17.13■□□□□ 0.33
PPP4R1-218ENST00000580745 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
PPP4R1-218ENST00000580745 TMEM2Q9UHN6 1383 aa17.13■□□□□ 0.33
PPP4R1-218ENST00000580745 EID1Q9Y6B2 187 aa17.12■□□□□ 0.33
PPP4R1-218ENST00000580745 NOS1P29475 1434 aa17.12■□□□□ 0.33
PPP4R1-218ENST00000580745 UBR1Q8IWV7 1749 aa17.11■□□□□ 0.33
PPP4R1-218ENST00000580745 HSPA1LP34931 641 aa17.11■□□□□ 0.33
PPP4R1-218ENST00000580745 SLIT1O75093 1534 aa17.11■□□□□ 0.33
PPP4R1-218ENST00000580745 TOM1O60784 492 aa17.1■□□□□ 0.33
PPP4R1-218ENST00000580745 IQGAP1P46940 1657 aa17.1■□□□□ 0.33
PPP4R1-218ENST00000580745 EFCAB6Q5THR3 1501 aa17.09■□□□□ 0.33
PPP4R1-218ENST00000580745 SYNMO15061 1565 aa17.09■□□□□ 0.33
PPP4R1-218ENST00000580745 PIK3C2BO00750 1634 aa17.09■□□□□ 0.33
PPP4R1-218ENST00000580745 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
PPP4R1-218ENST00000580745 CFAP65Q6ZU64 1925 aaKnown RBP17.08■□□□□ 0.32
PPP4R1-218ENST00000580745 SLC26A8Q96RN1 970 aa17.07■□□□□ 0.32
PPP4R1-218ENST00000580745 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
PPP4R1-218ENST00000580745 ROCK1Q13464 1354 aa17.05■□□□□ 0.32
PPP4R1-218ENST00000580745 ALKQ9UM73 1620 aa17.05■□□□□ 0.32
PPP4R1-218ENST00000580745 RBM33Q96EV2 1170 aaKnown RBP17.04■□□□□ 0.32
PPP4R1-218ENST00000580745 STRCP1A6NGW2 1772 aa17.03■□□□□ 0.32
PPP4R1-218ENST00000580745 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.32
PPP4R1-218ENST00000580745 BCANQ96GW7 911 aa17.02■□□□□ 0.32
PPP4R1-218ENST00000580745 NUP155O75694 1391 aa17.02■□□□□ 0.31
PPP4R1-218ENST00000580745 NUTM2DQ5VT03 806 aaPredicted RBP17.01■□□□□ 0.31
PPP4R1-218ENST00000580745 ADGRB3O60242 1522 aa17.01■□□□□ 0.31
PPP4R1-218ENST00000580745 RPRD2Q5VT52 1461 aaKnown RBP17■□□□□ 0.31
PPP4R1-218ENST00000580745 KCNA6P17658 529 aa16.98■□□□□ 0.31
PPP4R1-218ENST00000580745 TMEM94Q12767 1356 aa16.98■□□□□ 0.31
PPP4R1-218ENST00000580745 UNC13BO14795 1591 aa16.98■□□□□ 0.31
PPP4R1-218ENST00000580745 ZFYVE9O95405 1425 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms