RNA–Protein interactions for RNA: ENST00000579378.1

AC011840.3-201, humanhuman

TSL 3 BASIC

Gene AC011840.3, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.3-201ENST00000579378 TOM1O60784 492 aa13.55□□□□□ -0.24
AC011840.3-201ENST00000579378 PIP4K2BP78356 416 aa13.55□□□□□ -0.24
AC011840.3-201ENST00000579378 SCAF1Q9H7N4 1312 aaKnown RBP13.55□□□□□ -0.24
AC011840.3-201ENST00000579378 POLR1AO95602 1720 aaPredicted RBP13.55□□□□□ -0.24
AC011840.3-201ENST00000579378 TNRQ92752 1358 aa13.54□□□□□ -0.24
AC011840.3-201ENST00000579378 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
AC011840.3-201ENST00000579378 THEMISQ8N1K5 641 aaPredicted RBP13.53□□□□□ -0.24
AC011840.3-201ENST00000579378 WASHC2CQ9Y4E1 1318 aa13.53□□□□□ -0.24
AC011840.3-201ENST00000579378 SHANK2Q9UPX8 1470 aa13.53□□□□□ -0.24
AC011840.3-201ENST00000579378 NEURL4Q96JN8 1562 aa13.53□□□□□ -0.24
AC011840.3-201ENST00000579378 RSPH4AQ5TD94 716 aa13.52□□□□□ -0.25
AC011840.3-201ENST00000579378 CPS1P31327 1500 aa13.51□□□□□ -0.25
AC011840.3-201ENST00000579378 PZPP20742 1482 aa13.51□□□□□ -0.25
AC011840.3-201ENST00000579378 CEP162Q5TB80 1403 aa13.51□□□□□ -0.25
AC011840.3-201ENST00000579378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
AC011840.3-201ENST00000579378 EHBP1L1Q8N3D4 1523 aa13.5□□□□□ -0.25
AC011840.3-201ENST00000579378 MIA2Q96PC5 1412 aa13.5□□□□□ -0.25
AC011840.3-201ENST00000579378 KDM5DQ9BY66 1539 aa13.49□□□□□ -0.25
AC011840.3-201ENST00000579378 CFAP65Q6ZU64 1925 aaKnown RBP13.49□□□□□ -0.25
AC011840.3-201ENST00000579378 CCDC141Q6ZP82 1450 aa13.48□□□□□ -0.25
AC011840.3-201ENST00000579378 MED1Q15648 1581 aaPredicted RBP13.48□□□□□ -0.25
AC011840.3-201ENST00000579378 VWDEQ8N2E2 1590 aa13.47□□□□□ -0.25
AC011840.3-201ENST00000579378 TSPY4P0CV99 314 aa13.47□□□□□ -0.25
AC011840.3-201ENST00000579378 TSPY10P0CW01 314 aa13.47□□□□□ -0.25
AC011840.3-201ENST00000579378 FAM135AQ9P2D6 1515 aa13.47□□□□□ -0.25
AC011840.3-201ENST00000579378 MED14O60244 1454 aa13.47□□□□□ -0.25
AC011840.3-201ENST00000579378 UGGT1Q9NYU2 1555 aa13.46□□□□□ -0.25
AC011840.3-201ENST00000579378 CAMSAP2Q08AD1 1489 aa13.46□□□□□ -0.25
AC011840.3-201ENST00000579378 NLRP1Q9C000 1473 aa13.46□□□□□ -0.25
AC011840.3-201ENST00000579378 NPHP4O75161 1426 aaPredicted RBP13.46□□□□□ -0.26
AC011840.3-201ENST00000579378 DEPDC5O75140 1603 aa13.46□□□□□ -0.26
AC011840.3-201ENST00000579378 NCOA2Q15596 1464 aa13.45□□□□□ -0.26
AC011840.3-201ENST00000579378 ALKQ9UM73 1620 aa13.44□□□□□ -0.26
AC011840.3-201ENST00000579378 STRCP1A6NGW2 1772 aa13.43□□□□□ -0.26
AC011840.3-201ENST00000579378 ARHGEF5Q12774 1597 aa13.42□□□□□ -0.26
AC011840.3-201ENST00000579378 IQGAP1P46940 1657 aa13.42□□□□□ -0.26
AC011840.3-201ENST00000579378 PHF23Q9BUL5 403 aaPredicted RBP13.4□□□□□ -0.26
AC011840.3-201ENST00000579378 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
AC011840.3-201ENST00000579378 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
AC011840.3-201ENST00000579378 RNF17Q9BXT8 1623 aaKnown RBP13.39□□□□□ -0.27
AC011840.3-201ENST00000579378 ABCC3O15438 1527 aa13.39□□□□□ -0.27
AC011840.3-201ENST00000579378 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
AC011840.3-201ENST00000579378 ERVK-7P63135 1459 aa13.36□□□□□ -0.27
AC011840.3-201ENST00000579378 UBR1Q8IWV7 1749 aa13.36□□□□□ -0.27
AC011840.3-201ENST00000579378 LTKP29376 864 aa13.36□□□□□ -0.27
AC011840.3-201ENST00000579378 MAST1Q9Y2H9 1570 aa13.36□□□□□ -0.27
AC011840.3-201ENST00000579378 CEP152O94986 1710 aa13.36□□□□□ -0.27
AC011840.3-201ENST00000579378 TXNDC2Q86VQ3 553 aa13.35□□□□□ -0.27
AC011840.3-201ENST00000579378 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
AC011840.3-201ENST00000579378 MROH1Q8NDA8 1641 aa13.34□□□□□ -0.27
AC011840.3-201ENST00000579378 LRRC9Q6ZRR7 1453 aa13.34□□□□□ -0.27
AC011840.3-201ENST00000579378 XIRP1Q702N8 1843 aaKnown RBP13.34□□□□□ -0.27
AC011840.3-201ENST00000579378 RGS17Q9UGC6 210 aaPredicted RBP13.33□□□□□ -0.28
AC011840.3-201ENST00000579378 SYNMO15061 1565 aa13.32□□□□□ -0.28
AC011840.3-201ENST00000579378 SCAF11Q99590 1463 aaKnown RBP13.32□□□□□ -0.28
AC011840.3-201ENST00000579378 KANK4Q5T7N3 995 aaPredicted RBP13.32□□□□□ -0.28
AC011840.3-201ENST00000579378 ARHGAP23Q9P227 1491 aa13.31□□□□□ -0.28
AC011840.3-201ENST00000579378 SLIT1O75093 1534 aa13.3□□□□□ -0.28
AC011840.3-201ENST00000579378 EID1Q9Y6B2 187 aa13.3□□□□□ -0.28
AC011840.3-201ENST00000579378 DUOX2Q9NRD8 1548 aa13.29□□□□□ -0.28
AC011840.3-201ENST00000579378 ARHGAP31Q2M1Z3 1444 aa13.29□□□□□ -0.28
AC011840.3-201ENST00000579378 MYOM3Q5VTT5 1437 aa13.29□□□□□ -0.28
AC011840.3-201ENST00000579378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.28□□□□□ -0.28
AC011840.3-201ENST00000579378 RRP7BPQ9NSQ0 103 aa13.28□□□□□ -0.28
AC011840.3-201ENST00000579378 VPS8Q8N3P4 1428 aa13.28□□□□□ -0.28
AC011840.3-201ENST00000579378 LOC105371045A0A1W2PR82 267 aa13.27□□□□□ -0.29
AC011840.3-201ENST00000579378 PIK3C2BO00750 1634 aa13.26□□□□□ -0.29
AC011840.3-201ENST00000579378 FAM135BQ49AJ0 1406 aa13.26□□□□□ -0.29
AC011840.3-201ENST00000579378 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
AC011840.3-201ENST00000579378 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
AC011840.3-201ENST00000579378 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
AC011840.3-201ENST00000579378 TMEM2Q9UHN6 1383 aa13.25□□□□□ -0.29
AC011840.3-201ENST00000579378 KCNA6P17658 529 aa13.25□□□□□ -0.29
AC011840.3-201ENST00000579378 IDI1Q13907 227 aa13.25□□□□□ -0.29
AC011840.3-201ENST00000579378 POTEAQ6S8J7 498 aa13.24□□□□□ -0.29
AC011840.3-201ENST00000579378 PRDM15P57071 1507 aaPredicted RBP13.23□□□□□ -0.29
AC011840.3-201ENST00000579378 ABCC5O15440 1437 aa13.23□□□□□ -0.29
AC011840.3-201ENST00000579378 TMEM94Q12767 1356 aa13.23□□□□□ -0.29
AC011840.3-201ENST00000579378 PROSER2Q86WR7 435 aaPredicted RBP13.23□□□□□ -0.29
AC011840.3-201ENST00000579378 SLC26A8Q96RN1 970 aa13.23□□□□□ -0.29
AC011840.3-201ENST00000579378 ERBINQ96RT1 1412 aa13.22□□□□□ -0.29
AC011840.3-201ENST00000579378 RBM33Q96EV2 1170 aaKnown RBP13.22□□□□□ -0.29
AC011840.3-201ENST00000579378 TET3O43151 1660 aa13.21□□□□□ -0.29
AC011840.3-201ENST00000579378 KDM5AP29375 1690 aaKnown RBP13.21□□□□□ -0.29
AC011840.3-201ENST00000579378 KANK1Q14678 1352 aa13.21□□□□□ -0.29
AC011840.3-201ENST00000579378 CROCC2H7BZ55 1655 aa13.21□□□□□ -0.3
AC011840.3-201ENST00000579378 EFCAB6Q5THR3 1501 aa13.2□□□□□ -0.3
AC011840.3-201ENST00000579378 ROBO1Q9Y6N7 1651 aa13.2□□□□□ -0.3
AC011840.3-201ENST00000579378 PTPN23Q9H3S7 1636 aa13.2□□□□□ -0.3
AC011840.3-201ENST00000579378 CHIC2Q9UKJ5 165 aa13.19□□□□□ -0.3
AC011840.3-201ENST00000579378 DAPK1P53355 1430 aa13.18□□□□□ -0.3
AC011840.3-201ENST00000579378 SLAIN2Q9P270 581 aa13.17□□□□□ -0.3
AC011840.3-201ENST00000579378 LMTK2Q8IWU2 1503 aa13.17□□□□□ -0.3
AC011840.3-201ENST00000579378 NOS1P29475 1434 aa13.16□□□□□ -0.3
AC011840.3-201ENST00000579378 BCANQ96GW7 911 aa13.16□□□□□ -0.3
AC011840.3-201ENST00000579378 SLC52A1Q9NWF4 448 aa13.16□□□□□ -0.3
AC011840.3-201ENST00000579378 ANKRD30AQ9BXX3 1397 aa13.16□□□□□ -0.3
AC011840.3-201ENST00000579378 APLP2Q06481 763 aa13.15□□□□□ -0.3
AC011840.3-201ENST00000579378 CHD2O14647 1828 aaKnown RBP13.15□□□□□ -0.3
AC011840.3-201ENST00000579378 MYO5BQ9ULV0 1848 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms