RNA–Protein interactions for RNA: ENST00000578345.1

TMEM220-203, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM220, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-203ENST00000578345 CERKQ8TCT0 537 aa26.45■■□□□ 1.82
TMEM220-203ENST00000578345 NPATQ14207 1427 aa26.45■■□□□ 1.82
TMEM220-203ENST00000578345 ZMYM3Q14202 1370 aa26.45■■□□□ 1.82
TMEM220-203ENST00000578345 CROCC2H7BZ55 1655 aa26.44■■□□□ 1.82
TMEM220-203ENST00000578345 RRP7BPQ9NSQ0 103 aa26.43■■□□□ 1.82
TMEM220-203ENST00000578345 KIF3BO15066 747 aa26.42■■□□□ 1.82
TMEM220-203ENST00000578345 GGT6Q6P531 493 aa26.42■■□□□ 1.82
TMEM220-203ENST00000578345 RRBP1Q9P2E9 1410 aaKnown RBP26.41■■□□□ 1.82
TMEM220-203ENST00000578345 PPP6R1Q9UPN7 881 aa26.41■■□□□ 1.82
TMEM220-203ENST00000578345 NCOA1Q15788 1441 aa26.4■■□□□ 1.82
TMEM220-203ENST00000578345 ITGAEP38570 1179 aa26.4■■□□□ 1.82
TMEM220-203ENST00000578345 KIF15Q9NS87 1388 aa26.39■■□□□ 1.82
TMEM220-203ENST00000578345 PTPRTO14522 1441 aa26.39■■□□□ 1.81
TMEM220-203ENST00000578345 PTPRKQ15262 1439 aa26.38■■□□□ 1.81
TMEM220-203ENST00000578345 MYO3AQ8NEV4 1616 aa26.37■■□□□ 1.81
TMEM220-203ENST00000578345 DMRT2Q9Y5R5 561 aa26.37■■□□□ 1.81
TMEM220-203ENST00000578345 DUOX2Q9NRD8 1548 aa26.37■■□□□ 1.81
TMEM220-203ENST00000578345 ZNF142P52746 1687 aaPredicted RBP26.36■■□□□ 1.81
TMEM220-203ENST00000578345 CAMSAP1Q5T5Y3 1602 aa26.35■■□□□ 1.81
TMEM220-203ENST00000578345 ADGRL2O95490 1459 aa26.33■■□□□ 1.81
TMEM220-203ENST00000578345 ERBINQ96RT1 1412 aa26.31■■□□□ 1.8
TMEM220-203ENST00000578345 CEP170BQ9Y4F5 1589 aaPredicted RBP26.3■■□□□ 1.8
TMEM220-203ENST00000578345 ROCK1Q13464 1354 aa26.3■■□□□ 1.8
TMEM220-203ENST00000578345 LTBP4Q8N2S1 1624 aa26.29■■□□□ 1.8
TMEM220-203ENST00000578345 EIF2AK4Q9P2K8 1649 aaKnown RBP26.28■■□□□ 1.8
TMEM220-203ENST00000578345 WASHC2CQ9Y4E1 1318 aa26.27■■□□□ 1.8
TMEM220-203ENST00000578345 KDM5DQ9BY66 1539 aa26.24■■□□□ 1.79
TMEM220-203ENST00000578345 PLA2R1Q13018 1463 aa26.23■■□□□ 1.79
TMEM220-203ENST00000578345 NCKAP5LQ9HCH0 1330 aa26.22■■□□□ 1.79
TMEM220-203ENST00000578345 ANKRD50Q9ULJ7 1429 aa26.22■■□□□ 1.79
TMEM220-203ENST00000578345 FAM135AQ9P2D6 1515 aa26.21■■□□□ 1.79
TMEM220-203ENST00000578345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.2■■□□□ 1.78
TMEM220-203ENST00000578345 KANK1Q14678 1352 aa26.2■■□□□ 1.78
TMEM220-203ENST00000578345 A2ML1A8K2U0 1454 aa26.18■■□□□ 1.78
TMEM220-203ENST00000578345 PZPP20742 1482 aa26.18■■□□□ 1.78
TMEM220-203ENST00000578345 RNF17Q9BXT8 1623 aaKnown RBP26.18■■□□□ 1.78
TMEM220-203ENST00000578345 FBXO31Q5XUX0 539 aaPredicted RBP26.16■■□□□ 1.78
TMEM220-203ENST00000578345 TNRQ92752 1358 aa26.13■■□□□ 1.77
TMEM220-203ENST00000578345 ZNF335Q9H4Z2 1342 aaPredicted RBP26.12■■□□□ 1.77
TMEM220-203ENST00000578345 IQSEC2Q5JU85 1478 aa26.11■■□□□ 1.77
TMEM220-203ENST00000578345 MROH1Q8NDA8 1641 aa26.11■■□□□ 1.77
TMEM220-203ENST00000578345 PKD2Q13563 968 aa26.11■■□□□ 1.77
TMEM220-203ENST00000578345 ZC3H13Q5T200 1668 aaKnown RBP26.09■■□□□ 1.77
TMEM220-203ENST00000578345 ABCC3O15438 1527 aa26.09■■□□□ 1.77
TMEM220-203ENST00000578345 PRDM15P57071 1507 aaPredicted RBP26.09■■□□□ 1.77
TMEM220-203ENST00000578345 NEURL4Q96JN8 1562 aa26.08■■□□□ 1.77
TMEM220-203ENST00000578345 POLR1AO95602 1720 aaPredicted RBP26.08■■□□□ 1.76
TMEM220-203ENST00000578345 DEPDC5O75140 1603 aa26.07■■□□□ 1.76
TMEM220-203ENST00000578345 NAIPQ13075 1403 aa26.04■■□□□ 1.76
TMEM220-203ENST00000578345 HFM1A2PYH4 1435 aa26.03■■□□□ 1.76
TMEM220-203ENST00000578345 NLRP1Q9C000 1473 aa26.02■■□□□ 1.76
TMEM220-203ENST00000578345 CEP152O94986 1710 aa26.02■■□□□ 1.76
TMEM220-203ENST00000578345 SPATA31D1Q6ZQQ2 1576 aa26.01■■□□□ 1.75
TMEM220-203ENST00000578345 NUP155O75694 1391 aa25.99■■□□□ 1.75
TMEM220-203ENST00000578345 VWDEQ8N2E2 1590 aa25.98■■□□□ 1.75
TMEM220-203ENST00000578345 UGGT1Q9NYU2 1555 aa25.98■■□□□ 1.75
TMEM220-203ENST00000578345 LMTK2Q8IWU2 1503 aa25.98■■□□□ 1.75
TMEM220-203ENST00000578345 ERVK-7P63135 1459 aa25.98■■□□□ 1.75
TMEM220-203ENST00000578345 ARHGAP31Q2M1Z3 1444 aa25.97■■□□□ 1.75
TMEM220-203ENST00000578345 GCC2Q8IWJ2 1684 aa25.97■■□□□ 1.75
TMEM220-203ENST00000578345 UNC13BO14795 1591 aa25.97■■□□□ 1.75
TMEM220-203ENST00000578345 ACIN1Q9UKV3 1341 aaKnown RBP25.96■■□□□ 1.75
TMEM220-203ENST00000578345 TRIM52Q96A61 297 aa25.95■■□□□ 1.74
TMEM220-203ENST00000578345 CFAP65Q6ZU64 1925 aaKnown RBP25.94■■□□□ 1.74
TMEM220-203ENST00000578345 MED14O60244 1454 aa25.91■■□□□ 1.74
TMEM220-203ENST00000578345 THEMISQ8N1K5 641 aaPredicted RBP25.89■■□□□ 1.74
TMEM220-203ENST00000578345 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
TMEM220-203ENST00000578345 ANKLE2Q86XL3 938 aa25.88■■□□□ 1.73
TMEM220-203ENST00000578345 IQGAP3Q86VI3 1631 aa25.88■■□□□ 1.73
TMEM220-203ENST00000578345 EFCAB6Q5THR3 1501 aa25.88■■□□□ 1.73
TMEM220-203ENST00000578345 NPHP4O75161 1426 aaPredicted RBP25.88■■□□□ 1.73
TMEM220-203ENST00000578345 TET3O43151 1660 aa25.87■■□□□ 1.73
TMEM220-203ENST00000578345 RPRD2Q5VT52 1461 aaKnown RBP25.87■■□□□ 1.73
TMEM220-203ENST00000578345 UBR1Q8IWV7 1749 aa25.87■■□□□ 1.73
TMEM220-203ENST00000578345 IQGAP1P46940 1657 aa25.87■■□□□ 1.73
TMEM220-203ENST00000578345 UBAP1LF5GYI3 381 aa25.86■■□□□ 1.73
TMEM220-203ENST00000578345 CPS1P31327 1500 aa25.86■■□□□ 1.73
TMEM220-203ENST00000578345 DISP3Q9P2K9 1392 aa25.83■■□□□ 1.73
TMEM220-203ENST00000578345 SLC4A1APQ9BWU0 796 aaKnown RBP25.81■■□□□ 1.72
TMEM220-203ENST00000578345 STRCP1A6NGW2 1772 aa25.81■■□□□ 1.72
TMEM220-203ENST00000578345 SLC52A1Q9NWF4 448 aa25.8■■□□□ 1.72
TMEM220-203ENST00000578345 STAG3Q9UJ98 1225 aa25.8■■□□□ 1.72
TMEM220-203ENST00000578345 ILDR2Q71H61 639 aa25.78■■□□□ 1.72
TMEM220-203ENST00000578345 NOS1P29475 1434 aa25.78■■□□□ 1.72
TMEM220-203ENST00000578345 ARHGAP23Q9P227 1491 aa25.77■■□□□ 1.72
TMEM220-203ENST00000578345 ALKQ9UM73 1620 aa25.77■■□□□ 1.72
TMEM220-203ENST00000578345 HRCP23327 699 aa25.76■■□□□ 1.71
TMEM220-203ENST00000578345 RAB3GAP2Q9H2M9 1393 aa25.76■■□□□ 1.71
TMEM220-203ENST00000578345 PIK3C2BO00750 1634 aa25.75■■□□□ 1.71
TMEM220-203ENST00000578345 SLIT1O75093 1534 aa25.75■■□□□ 1.71
TMEM220-203ENST00000578345 IDI1Q13907 227 aa25.75■■□□□ 1.71
TMEM220-203ENST00000578345 E9PCH4 1651 aa25.74■■□□□ 1.71
TMEM220-203ENST00000578345 SCAF11Q99590 1463 aaKnown RBP25.74■■□□□ 1.71
TMEM220-203ENST00000578345 TRIM26Q12899 539 aaPredicted RBP25.74■■□□□ 1.71
TMEM220-203ENST00000578345 SYNMO15061 1565 aa25.72■■□□□ 1.71
TMEM220-203ENST00000578345 LTKP29376 864 aa25.71■■□□□ 1.71
TMEM220-203ENST00000578345 MPHOSPH9Q99550 1183 aa25.71■■□□□ 1.71
TMEM220-203ENST00000578345 LRRC7Q96NW7 1537 aa25.69■■□□□ 1.7
TMEM220-203ENST00000578345 CHGAP10645 457 aaKnown RBP25.66■■□□□ 1.7
TMEM220-203ENST00000578345 PIP4K2BP78356 416 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms