RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 TCOF1Q13428 1488 aaKnown RBP22.58■■□□□ 1.2
SMARCD2-205ENST00000577686 KDM5DQ9BY66 1539 aa22.57■■□□□ 1.2
SMARCD2-205ENST00000577686 TNRQ92752 1358 aa22.55■■□□□ 1.2
SMARCD2-205ENST00000577686 WASHC2CQ9Y4E1 1318 aa22.55■■□□□ 1.2
SMARCD2-205ENST00000577686 ARHGEF5Q12774 1597 aa22.54■■□□□ 1.2
SMARCD2-205ENST00000577686 PZPP20742 1482 aa22.54■■□□□ 1.2
SMARCD2-205ENST00000577686 ZNF335Q9H4Z2 1342 aaPredicted RBP22.53■■□□□ 1.2
SMARCD2-205ENST00000577686 VPS8Q8N3P4 1428 aa22.5■■□□□ 1.19
SMARCD2-205ENST00000577686 UBAP1LF5GYI3 381 aa22.5■■□□□ 1.19
SMARCD2-205ENST00000577686 DNMT1P26358 1616 aaKnown RBP22.49■■□□□ 1.19
SMARCD2-205ENST00000577686 SPATA31D1Q6ZQQ2 1576 aa22.49■■□□□ 1.19
SMARCD2-205ENST00000577686 LRRC9Q6ZRR7 1453 aa22.47■■□□□ 1.19
SMARCD2-205ENST00000577686 NLRP1Q9C000 1473 aa22.47■■□□□ 1.19
SMARCD2-205ENST00000577686 THEMISQ8N1K5 641 aaPredicted RBP22.46■■□□□ 1.19
SMARCD2-205ENST00000577686 ANKLE2Q86XL3 938 aa22.45■■□□□ 1.18
SMARCD2-205ENST00000577686 CPS1P31327 1500 aa22.43■■□□□ 1.18
SMARCD2-205ENST00000577686 MAP3K1Q13233 1512 aa22.43■■□□□ 1.18
SMARCD2-205ENST00000577686 MIA2Q96PC5 1412 aa22.43■■□□□ 1.18
SMARCD2-205ENST00000577686 FBXO31Q5XUX0 539 aaPredicted RBP22.43■■□□□ 1.18
SMARCD2-205ENST00000577686 POLR1AO95602 1720 aaPredicted RBP22.43■■□□□ 1.18
SMARCD2-205ENST00000577686 MAST1Q9Y2H9 1570 aa22.42■■□□□ 1.18
SMARCD2-205ENST00000577686 ZC3H13Q5T200 1668 aaKnown RBP22.41■■□□□ 1.18
SMARCD2-205ENST00000577686 UGGT1Q9NYU2 1555 aa22.4■■□□□ 1.18
SMARCD2-205ENST00000577686 EIF2AK4Q9P2K8 1649 aaKnown RBP22.39■■□□□ 1.18
SMARCD2-205ENST00000577686 MYOM3Q5VTT5 1437 aa22.39■■□□□ 1.17
SMARCD2-205ENST00000577686 RNF17Q9BXT8 1623 aaKnown RBP22.39■■□□□ 1.17
SMARCD2-205ENST00000577686 SOCS7O14512 581 aa22.37■■□□□ 1.17
SMARCD2-205ENST00000577686 TOM1O60784 492 aa22.37■■□□□ 1.17
SMARCD2-205ENST00000577686 APLP2Q06481 763 aa22.37■■□□□ 1.17
SMARCD2-205ENST00000577686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.37■■□□□ 1.179e-6■□□□□ 9.6
SMARCD2-205ENST00000577686 SHANK2Q9UPX8 1470 aa22.36■■□□□ 1.17
SMARCD2-205ENST00000577686 NEURL4Q96JN8 1562 aa22.35■■□□□ 1.17
SMARCD2-205ENST00000577686 ABCC3O15438 1527 aa22.35■■□□□ 1.17
SMARCD2-205ENST00000577686 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
SMARCD2-205ENST00000577686 NPHP4O75161 1426 aaPredicted RBP22.34■■□□□ 1.17
SMARCD2-205ENST00000577686 ILDR2Q71H61 639 aa22.34■■□□□ 1.17
SMARCD2-205ENST00000577686 DEPDC5O75140 1603 aa22.34■■□□□ 1.17
SMARCD2-205ENST00000577686 DUOX2Q9NRD8 1548 aa22.33■■□□□ 1.17
SMARCD2-205ENST00000577686 MED14O60244 1454 aa22.33■■□□□ 1.16
SMARCD2-205ENST00000577686 ERVK-7P63135 1459 aa22.3■■□□□ 1.16
SMARCD2-205ENST00000577686 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
SMARCD2-205ENST00000577686 KANK4Q5T7N3 995 aaPredicted RBP22.28■■□□□ 1.16
SMARCD2-205ENST00000577686 PIP4K2BP78356 416 aa22.27■■□□□ 1.16
SMARCD2-205ENST00000577686 ERBINQ96RT1 1412 aa22.27■■□□□ 1.16
SMARCD2-205ENST00000577686 KIF15Q9NS87 1388 aa22.26■■□□□ 1.15
SMARCD2-205ENST00000577686 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
SMARCD2-205ENST00000577686 VWDEQ8N2E2 1590 aa22.25■■□□□ 1.15
SMARCD2-205ENST00000577686 KANK1Q14678 1352 aa22.25■■□□□ 1.15
SMARCD2-205ENST00000577686 MROH1Q8NDA8 1641 aa22.23■■□□□ 1.15
SMARCD2-205ENST00000577686 ARHGAP31Q2M1Z3 1444 aa22.22■■□□□ 1.15
SMARCD2-205ENST00000577686 PRDM15P57071 1507 aaPredicted RBP22.21■■□□□ 1.15
SMARCD2-205ENST00000577686 SYNMO15061 1565 aa22.21■■□□□ 1.15
SMARCD2-205ENST00000577686 HSPA1LP34931 641 aa22.2■■□□□ 1.14
SMARCD2-205ENST00000577686 SCAF11Q99590 1463 aaKnown RBP22.2■■□□□ 1.14
SMARCD2-205ENST00000577686 PTPN23Q9H3S7 1636 aa22.2■■□□□ 1.14
SMARCD2-205ENST00000577686 CEP152O94986 1710 aa22.2■■□□□ 1.14
SMARCD2-205ENST00000577686 EID1Q9Y6B2 187 aa22.19■■□□□ 1.14
SMARCD2-205ENST00000577686 CROCC2H7BZ55 1655 aa22.19■■□□□ 1.14
SMARCD2-205ENST00000577686 ABCC5O15440 1437 aa22.18■■□□□ 1.14
SMARCD2-205ENST00000577686 RRP7BPQ9NSQ0 103 aa22.18■■□□□ 1.14
SMARCD2-205ENST00000577686 DAPK1P53355 1430 aa22.17■■□□□ 1.14
SMARCD2-205ENST00000577686 ANKRD30AQ9BXX3 1397 aa22.17■■□□□ 1.14
SMARCD2-205ENST00000577686 STAG3Q9UJ98 1225 aa22.16■■□□□ 1.14
SMARCD2-205ENST00000577686 FGD6Q6ZV73 1430 aa22.15■■□□□ 1.14
SMARCD2-205ENST00000577686 UBR1Q8IWV7 1749 aa22.15■■□□□ 1.14
SMARCD2-205ENST00000577686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.15■■□□□ 1.14
SMARCD2-205ENST00000577686 TXNDC2Q86VQ3 553 aa22.14■■□□□ 1.13
SMARCD2-205ENST00000577686 SLIT1O75093 1534 aa22.14■■□□□ 1.13
SMARCD2-205ENST00000577686 ARHGAP23Q9P227 1491 aa22.13■■□□□ 1.13
SMARCD2-205ENST00000577686 MED1Q15648 1581 aaPredicted RBP22.12■■□□□ 1.13
SMARCD2-205ENST00000577686 LRRC7Q96NW7 1537 aa22.12■■□□□ 1.13
SMARCD2-205ENST00000577686 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
SMARCD2-205ENST00000577686 LMTK2Q8IWU2 1503 aa22.08■■□□□ 1.13
SMARCD2-205ENST00000577686 TMEM2Q9UHN6 1383 aa22.07■■□□□ 1.12
SMARCD2-205ENST00000577686 LTKP29376 864 aa22.06■■□□□ 1.12
SMARCD2-205ENST00000577686 EFCAB6Q5THR3 1501 aa22.06■■□□□ 1.12
SMARCD2-205ENST00000577686 KDM5AP29375 1690 aaKnown RBP22.05■■□□□ 1.12
SMARCD2-205ENST00000577686 CHIC2Q9UKJ5 165 aa22.05■■□□□ 1.12
SMARCD2-205ENST00000577686 PIK3C2BO00750 1634 aa22.05■■□□□ 1.12
SMARCD2-205ENST00000577686 CFAP65Q6ZU64 1925 aaKnown RBP22.04■■□□□ 1.12
SMARCD2-205ENST00000577686 ALKQ9UM73 1620 aa22.02■■□□□ 1.11
SMARCD2-205ENST00000577686 STRCP1A6NGW2 1772 aa22.02■■□□□ 1.11
SMARCD2-205ENST00000577686 SLC52A1Q9NWF4 448 aa22.01■■□□□ 1.11
SMARCD2-205ENST00000577686 ADGRL2O95490 1459 aa22.01■■□□□ 1.11
SMARCD2-205ENST00000577686 FAM50AQ14320 339 aaKnown RBP21.99■■□□□ 1.11
SMARCD2-205ENST00000577686 IDI1Q13907 227 aa21.98■■□□□ 1.11
SMARCD2-205ENST00000577686 RPRD2Q5VT52 1461 aaKnown RBP21.97■■□□□ 1.11
SMARCD2-205ENST00000577686 ADGRB3O60242 1522 aa21.97■■□□□ 1.11
SMARCD2-205ENST00000577686 NOS1P29475 1434 aa21.97■■□□□ 1.11
SMARCD2-205ENST00000577686 HDGFP51858 240 aaKnown RBP21.96■■□□□ 1.11
SMARCD2-205ENST00000577686 BCANQ96GW7 911 aa21.96■■□□□ 1.11
SMARCD2-205ENST00000577686 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
SMARCD2-205ENST00000577686 ANKRD50Q9ULJ7 1429 aa21.96■■□□□ 1.11
SMARCD2-205ENST00000577686 KCNA6P17658 529 aa21.95■■□□□ 1.1
SMARCD2-205ENST00000577686 NKTRP30414 1462 aaKnown RBP21.92■■□□□ 1.1
SMARCD2-205ENST00000577686 TMEM94Q12767 1356 aa21.92■■□□□ 1.1
SMARCD2-205ENST00000577686 FAM135BQ49AJ0 1406 aa21.91■■□□□ 1.1
SMARCD2-205ENST00000577686 PPP1R15AO75807 674 aaPredicted RBP21.91■■□□□ 1.1
SMARCD2-205ENST00000577686 PROSER2Q86WR7 435 aaPredicted RBP21.91■■□□□ 1.1
SMARCD2-205ENST00000577686 SLC26A8Q96RN1 970 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms