RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 CPS1P31327 1500 aa26.53■■□□□ 1.84
CTDNEP1-211ENST00000575783 TNRQ92752 1358 aa26.52■■□□□ 1.84
CTDNEP1-211ENST00000575783 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.49■■□□□ 1.832e-14■■■■□ 24.3
CTDNEP1-211ENST00000575783 KIF3BO15066 747 aa26.49■■□□□ 1.83
CTDNEP1-211ENST00000575783 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
CTDNEP1-211ENST00000575783 THEMISQ8N1K5 641 aaPredicted RBP26.47■■□□□ 1.83
CTDNEP1-211ENST00000575783 DHX29Q7Z478 1369 aaKnown RBP26.46■■□□□ 1.83
CTDNEP1-211ENST00000575783 MTUS2Q5JR59 1369 aa26.46■■□□□ 1.83
CTDNEP1-211ENST00000575783 WASHC2CQ9Y4E1 1318 aa26.45■■□□□ 1.83
CTDNEP1-211ENST00000575783 NEURL4Q96JN8 1562 aa26.45■■□□□ 1.82
CTDNEP1-211ENST00000575783 ADGBQ8N7X0 1667 aa26.42■■□□□ 1.82
CTDNEP1-211ENST00000575783 MBD5Q9P267 1494 aa26.4■■□□□ 1.82
CTDNEP1-211ENST00000575783 RTEL1-TNFRSF6BF6WH68 1400 aa26.39■■□□□ 1.82
CTDNEP1-211ENST00000575783 NPHP4O75161 1426 aaPredicted RBP26.39■■□□□ 1.82
CTDNEP1-211ENST00000575783 VWDEQ8N2E2 1590 aa26.38■■□□□ 1.81
CTDNEP1-211ENST00000575783 PZPP20742 1482 aa26.38■■□□□ 1.81
CTDNEP1-211ENST00000575783 POLR1AO95602 1720 aaPredicted RBP26.38■■□□□ 1.81
CTDNEP1-211ENST00000575783 MIA2Q96PC5 1412 aa26.38■■□□□ 1.81
CTDNEP1-211ENST00000575783 ALKQ9UM73 1620 aa26.34■■□□□ 1.81
CTDNEP1-211ENST00000575783 FAM135AQ9P2D6 1515 aa26.34■■□□□ 1.81
CTDNEP1-211ENST00000575783 KDM5DQ9BY66 1539 aa26.33■■□□□ 1.81
CTDNEP1-211ENST00000575783 UGGT1Q9NYU2 1555 aa26.33■■□□□ 1.8
CTDNEP1-211ENST00000575783 MED14O60244 1454 aa26.32■■□□□ 1.8
CTDNEP1-211ENST00000575783 NLRP1Q9C000 1473 aa26.31■■□□□ 1.8
CTDNEP1-211ENST00000575783 TIAM1Q13009 1591 aa26.29■■□□□ 1.8
CTDNEP1-211ENST00000575783 LRRC7Q96NW7 1537 aa26.28■■□□□ 1.8
CTDNEP1-211ENST00000575783 RGS17Q9UGC6 210 aaPredicted RBP26.27■■□□□ 1.8
CTDNEP1-211ENST00000575783 RSPH4AQ5TD94 716 aa26.25■■□□□ 1.79
CTDNEP1-211ENST00000575783 CCDC141Q6ZP82 1450 aa26.24■■□□□ 1.79
CTDNEP1-211ENST00000575783 DEPDC5O75140 1603 aa26.24■■□□□ 1.79
CTDNEP1-211ENST00000575783 TSPY4P0CV99 314 aa26.22■■□□□ 1.79
CTDNEP1-211ENST00000575783 TSPY10P0CW01 314 aa26.22■■□□□ 1.79
CTDNEP1-211ENST00000575783 IQGAP1P46940 1657 aa26.21■■□□□ 1.79
CTDNEP1-211ENST00000575783 CEP162Q5TB80 1403 aa26.21■■□□□ 1.79
CTDNEP1-211ENST00000575783 EHBP1L1Q8N3D4 1523 aa26.19■■□□□ 1.78
CTDNEP1-211ENST00000575783 CAMSAP2Q08AD1 1489 aa26.17■■□□□ 1.78
CTDNEP1-211ENST00000575783 STRCP1A6NGW2 1772 aa26.16■■□□□ 1.78
CTDNEP1-211ENST00000575783 RNF17Q9BXT8 1623 aaKnown RBP26.15■■□□□ 1.78
CTDNEP1-211ENST00000575783 TXNDC2Q86VQ3 553 aa26.13■■□□□ 1.77
CTDNEP1-211ENST00000575783 LTKP29376 864 aa26.12■■□□□ 1.77
CTDNEP1-211ENST00000575783 POTEAQ6S8J7 498 aa26.11■■□□□ 1.77
CTDNEP1-211ENST00000575783 SYNMO15061 1565 aa26.11■■□□□ 1.77
CTDNEP1-211ENST00000575783 NCOA2Q15596 1464 aa26.11■■□□□ 1.77
CTDNEP1-211ENST00000575783 ERVK-7P63135 1459 aa26.09■■□□□ 1.77
CTDNEP1-211ENST00000575783 ABCC3O15438 1527 aa26.09■■□□□ 1.77
CTDNEP1-211ENST00000575783 SCAF11Q99590 1463 aaKnown RBP26.08■■□□□ 1.77
CTDNEP1-211ENST00000575783 EID1Q9Y6B2 187 aa26.06■■□□□ 1.76
CTDNEP1-211ENST00000575783 FAM135BQ49AJ0 1406 aa26.02■■□□□ 1.76
CTDNEP1-211ENST00000575783 ARHGEF5Q12774 1597 aa26.01■■□□□ 1.75
CTDNEP1-211ENST00000575783 ZC3H13Q5T200 1668 aaKnown RBP26.01■■□□□ 1.75
CTDNEP1-211ENST00000575783 RBM33Q96EV2 1170 aaKnown RBP25.98■■□□□ 1.75
CTDNEP1-211ENST00000575783 STAG3Q9UJ98 1225 aa25.98■■□□□ 1.75
CTDNEP1-211ENST00000575783 TMEM94Q12767 1356 aa25.97■■□□□ 1.75
CTDNEP1-211ENST00000575783 ARHGAP23Q9P227 1491 aa25.97■■□□□ 1.75
CTDNEP1-211ENST00000575783 UBR1Q8IWV7 1749 aa25.97■■□□□ 1.75
CTDNEP1-211ENST00000575783 PROSER2Q86WR7 435 aaPredicted RBP25.95■■□□□ 1.74
CTDNEP1-211ENST00000575783 SLIT1O75093 1534 aa25.94■■□□□ 1.74
CTDNEP1-211ENST00000575783 KCNA6P17658 529 aa25.92■■□□□ 1.74
CTDNEP1-211ENST00000575783 SLC26A8Q96RN1 970 aa25.92■■□□□ 1.74
CTDNEP1-211ENST00000575783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.92■■□□□ 1.749e-7■■□□□ 12.2
CTDNEP1-211ENST00000575783 TMEM2Q9UHN6 1383 aa25.91■■□□□ 1.74
CTDNEP1-211ENST00000575783 CFAP65Q6ZU64 1925 aaKnown RBP25.9■■□□□ 1.74
CTDNEP1-211ENST00000575783 MROH1Q8NDA8 1641 aa25.9■■□□□ 1.74
CTDNEP1-211ENST00000575783 XIRP1Q702N8 1843 aaKnown RBP25.89■■□□□ 1.74
CTDNEP1-211ENST00000575783 MAST1Q9Y2H9 1570 aa25.88■■□□□ 1.73
CTDNEP1-211ENST00000575783 EIF2AK4Q9P2K8 1649 aaKnown RBP25.88■■□□□ 1.73
CTDNEP1-211ENST00000575783 CEP152O94986 1710 aa25.87■■□□□ 1.73
CTDNEP1-211ENST00000575783 RRP7BPQ9NSQ0 103 aa25.86■■□□□ 1.73
CTDNEP1-211ENST00000575783 ARHGAP31Q2M1Z3 1444 aa25.86■■□□□ 1.73
CTDNEP1-211ENST00000575783 BCANQ96GW7 911 aa25.85■■□□□ 1.73
CTDNEP1-211ENST00000575783 IDI1Q13907 227 aa25.84■■□□□ 1.73
CTDNEP1-211ENST00000575783 DUOX2Q9NRD8 1548 aa25.83■■□□□ 1.73
CTDNEP1-211ENST00000575783 SLAIN2Q9P270 581 aa25.83■■□□□ 1.73
CTDNEP1-211ENST00000575783 ROBO1Q9Y6N7 1651 aa25.83■■□□□ 1.73
CTDNEP1-211ENST00000575783 KIF15Q9NS87 1388 aa25.81■■□□□ 1.72
CTDNEP1-211ENST00000575783 LRRC9Q6ZRR7 1453 aa25.8■■□□□ 1.72
CTDNEP1-211ENST00000575783 PIK3C2BO00750 1634 aa25.79■■□□□ 1.72
CTDNEP1-211ENST00000575783 KANK4Q5T7N3 995 aaPredicted RBP25.79■■□□□ 1.72
CTDNEP1-211ENST00000575783 MSH6P52701 1360 aa25.79■■□□□ 1.72
CTDNEP1-211ENST00000575783 JCADQ9P266 1359 aa25.79■■□□□ 1.72
CTDNEP1-211ENST00000575783 MYOM3Q5VTT5 1437 aa25.79■■□□□ 1.72
CTDNEP1-211ENST00000575783 MAP3K1Q13233 1512 aa25.78■■□□□ 1.72
CTDNEP1-211ENST00000575783 KANK1Q14678 1352 aa25.77■■□□□ 1.72
CTDNEP1-211ENST00000575783 EFCAB6Q5THR3 1501 aa25.76■■□□□ 1.71
CTDNEP1-211ENST00000575783 SETD1AO15047 1707 aaKnown RBP25.75■■□□□ 1.71
CTDNEP1-211ENST00000575783 PRDM15P57071 1507 aaPredicted RBP25.75■■□□□ 1.71
CTDNEP1-211ENST00000575783 MEX3CQ5U5Q3 659 aaKnown RBP25.74■■□□□ 1.71
CTDNEP1-211ENST00000575783 ERBINQ96RT1 1412 aa25.73■■□□□ 1.71
CTDNEP1-211ENST00000575783 UPF1Q92900 1129 aaKnown RBP eCLIP25.73■■□□□ 1.71
CTDNEP1-211ENST00000575783 TRIM52Q96A61 297 aa25.73■■□□□ 1.71
CTDNEP1-211ENST00000575783 TET3O43151 1660 aa25.73■■□□□ 1.71
CTDNEP1-211ENST00000575783 NKTRP30414 1462 aaKnown RBP25.69■■□□□ 1.7
CTDNEP1-211ENST00000575783 ZNF772Q68DY9 489 aaPredicted RBP25.69■■□□□ 1.7
CTDNEP1-211ENST00000575783 ABCC5O15440 1437 aa25.68■■□□□ 1.7
CTDNEP1-211ENST00000575783 PHLPP1O60346 1717 aa25.68■■□□□ 1.7
CTDNEP1-211ENST00000575783 C14orf37Q86TY3 774 aa25.67■■□□□ 1.7
CTDNEP1-211ENST00000575783 CHIC2Q9UKJ5 165 aa25.66■■□□□ 1.7
CTDNEP1-211ENST00000575783 SPATA31A6Q5VVP1 1343 aa25.65■■□□□ 1.7
CTDNEP1-211ENST00000575783 SLC52A1Q9NWF4 448 aa25.65■■□□□ 1.7
CTDNEP1-211ENST00000575783 VPS8Q8N3P4 1428 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms