RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 ZC3H13Q5T200 1668 aaKnown RBP16.56■□□□□ 0.24
LITAF-216ENST00000574848 TSPY4P0CV99 314 aa16.56■□□□□ 0.24
LITAF-216ENST00000574848 TSPY10P0CW01 314 aa16.56■□□□□ 0.24
LITAF-216ENST00000574848 GGT6Q6P531 493 aa16.55■□□□□ 0.24
LITAF-216ENST00000574848 MROH1Q8NDA8 1641 aa16.55■□□□□ 0.24
LITAF-216ENST00000574848 DUOX2Q9NRD8 1548 aa16.55■□□□□ 0.24
LITAF-216ENST00000574848 CEP170BQ9Y4F5 1589 aaPredicted RBP16.54■□□□□ 0.24
LITAF-216ENST00000574848 PZPP20742 1482 aa16.54■□□□□ 0.24
LITAF-216ENST00000574848 ABCC5O15440 1437 aa16.53■□□□□ 0.24
LITAF-216ENST00000574848 DAPK1P53355 1430 aa16.53■□□□□ 0.24
LITAF-216ENST00000574848 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
LITAF-216ENST00000574848 KIF3BO15066 747 aa16.52■□□□□ 0.24
LITAF-216ENST00000574848 ABCC3O15438 1527 aa16.5■□□□□ 0.23
LITAF-216ENST00000574848 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
LITAF-216ENST00000574848 PLA2R1Q13018 1463 aa16.5■□□□□ 0.23
LITAF-216ENST00000574848 ILDR1Q86SU0 546 aaPredicted RBP16.5■□□□□ 0.23
LITAF-216ENST00000574848 PTPRTO14522 1441 aa16.5■□□□□ 0.23
LITAF-216ENST00000574848 ERBINQ96RT1 1412 aa16.5■□□□□ 0.23
LITAF-216ENST00000574848 DEPDC5O75140 1603 aa16.49■□□□□ 0.23
LITAF-216ENST00000574848 CAMSAP1Q5T5Y3 1602 aa16.49■□□□□ 0.23
LITAF-216ENST00000574848 KIF15Q9NS87 1388 aa16.48■□□□□ 0.23
LITAF-216ENST00000574848 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
LITAF-216ENST00000574848 ADGRL2O95490 1459 aa16.47■□□□□ 0.23
LITAF-216ENST00000574848 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
LITAF-216ENST00000574848 SPATA31D1Q6ZQQ2 1576 aa16.46■□□□□ 0.23
LITAF-216ENST00000574848 CEP152O94986 1710 aa16.45■□□□□ 0.22
LITAF-216ENST00000574848 TNRQ92752 1358 aa16.44■□□□□ 0.22
LITAF-216ENST00000574848 WASHC2CQ9Y4E1 1318 aa16.44■□□□□ 0.22
LITAF-216ENST00000574848 NLRP1Q9C000 1473 aa16.43■□□□□ 0.22
LITAF-216ENST00000574848 FBXO41Q8TF61 875 aa16.42■□□□□ 0.22
LITAF-216ENST00000574848 VWDEQ8N2E2 1590 aa16.42■□□□□ 0.22
LITAF-216ENST00000574848 ANKRD30AQ9BXX3 1397 aa16.41■□□□□ 0.22
LITAF-216ENST00000574848 POLR1AO95602 1720 aaPredicted RBP16.41■□□□□ 0.22
LITAF-216ENST00000574848 ERVK-7P63135 1459 aa16.41■□□□□ 0.22
LITAF-216ENST00000574848 ARHGAP31Q2M1Z3 1444 aa16.4■□□□□ 0.22
LITAF-216ENST00000574848 LMTK2Q8IWU2 1503 aa16.4■□□□□ 0.22
LITAF-216ENST00000574848 LTBP4Q8N2S1 1624 aa16.39■□□□□ 0.21
LITAF-216ENST00000574848 FBXO31Q5XUX0 539 aaPredicted RBP16.38■□□□□ 0.21
LITAF-216ENST00000574848 NEURL4Q96JN8 1562 aa16.38■□□□□ 0.21
LITAF-216ENST00000574848 UGGT1Q9NYU2 1555 aa16.36■□□□□ 0.21
LITAF-216ENST00000574848 PKD2Q13563 968 aa16.36■□□□□ 0.21
LITAF-216ENST00000574848 CERKQ8TCT0 537 aa16.36■□□□□ 0.21
LITAF-216ENST00000574848 RRP7BPQ9NSQ0 103 aa16.36■□□□□ 0.21
LITAF-216ENST00000574848 IQSEC2Q5JU85 1478 aa16.35■□□□□ 0.21
LITAF-216ENST00000574848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.34■□□□□ 0.21
LITAF-216ENST00000574848 EFCAB6Q5THR3 1501 aa16.33■□□□□ 0.2
LITAF-216ENST00000574848 UBR1Q8IWV7 1749 aa16.33■□□□□ 0.2
LITAF-216ENST00000574848 UNC13BO14795 1591 aa16.32■□□□□ 0.2
LITAF-216ENST00000574848 MED14O60244 1454 aa16.31■□□□□ 0.2
LITAF-216ENST00000574848 ANKRD50Q9ULJ7 1429 aa16.31■□□□□ 0.2
LITAF-216ENST00000574848 ROCK1Q13464 1354 aa16.31■□□□□ 0.2
LITAF-216ENST00000574848 KANK1Q14678 1352 aa16.31■□□□□ 0.2
LITAF-216ENST00000574848 NCKAP5LQ9HCH0 1330 aa16.31■□□□□ 0.2
LITAF-216ENST00000574848 FAM50AQ14320 339 aaKnown RBP16.31■□□□□ 0.2
LITAF-216ENST00000574848 CHIC2Q9UKJ5 165 aa16.31■□□□□ 0.2
LITAF-216ENST00000574848 KDM5AP29375 1690 aaKnown RBP16.3■□□□□ 0.2
LITAF-216ENST00000574848 TET3O43151 1660 aa16.27■□□□□ 0.2
LITAF-216ENST00000574848 SYNMO15061 1565 aa16.27■□□□□ 0.2
LITAF-216ENST00000574848 THEMISQ8N1K5 641 aaPredicted RBP16.27■□□□□ 0.2
LITAF-216ENST00000574848 SLIT1O75093 1534 aa16.27■□□□□ 0.2
LITAF-216ENST00000574848 RPRD2Q5VT52 1461 aaKnown RBP16.27■□□□□ 0.19
LITAF-216ENST00000574848 IQGAP1P46940 1657 aa16.27■□□□□ 0.19
LITAF-216ENST00000574848 PIK3C2BO00750 1634 aa16.27■□□□□ 0.19
LITAF-216ENST00000574848 ARHGAP23Q9P227 1491 aa16.26■□□□□ 0.19
LITAF-216ENST00000574848 GCC2Q8IWJ2 1684 aa16.26■□□□□ 0.19
LITAF-216ENST00000574848 NOS1P29475 1434 aa16.26■□□□□ 0.19
LITAF-216ENST00000574848 RRBP1Q9P2E9 1410 aaKnown RBP16.26■□□□□ 0.19
LITAF-216ENST00000574848 CFAP65Q6ZU64 1925 aaKnown RBP16.25■□□□□ 0.19
LITAF-216ENST00000574848 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
LITAF-216ENST00000574848 ZNF335Q9H4Z2 1342 aaPredicted RBP16.23■□□□□ 0.19
LITAF-216ENST00000574848 NPHP4O75161 1426 aaPredicted RBP16.23■□□□□ 0.19
LITAF-216ENST00000574848 CPS1P31327 1500 aa16.23■□□□□ 0.19
LITAF-216ENST00000574848 ANKLE2Q86XL3 938 aa16.22■□□□□ 0.19
LITAF-216ENST00000574848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
LITAF-216ENST00000574848 ADGRB3O60242 1522 aa16.21■□□□□ 0.19
LITAF-216ENST00000574848 SCAF11Q99590 1463 aaKnown RBP16.21■□□□□ 0.19
LITAF-216ENST00000574848 E9PCH4 1651 aa16.18■□□□□ 0.18
LITAF-216ENST00000574848 TMEM2Q9UHN6 1383 aa16.16■□□□□ 0.18
LITAF-216ENST00000574848 STRCP1A6NGW2 1772 aa16.15■□□□□ 0.18
LITAF-216ENST00000574848 PPARGC1BQ86YN6 1023 aaKnown RBP16.14■□□□□ 0.17
LITAF-216ENST00000574848 SLC52A1Q9NWF4 448 aa16.13■□□□□ 0.17
LITAF-216ENST00000574848 TMEM131LA2VDJ0 1609 aa16.12■□□□□ 0.17
LITAF-216ENST00000574848 IDI1Q13907 227 aa16.12■□□□□ 0.17
LITAF-216ENST00000574848 LTKP29376 864 aa16.11■□□□□ 0.17
LITAF-216ENST00000574848 NAIPQ13075 1403 aa16.11■□□□□ 0.17
LITAF-216ENST00000574848 MYO5BQ9ULV0 1848 aa16.1■□□□□ 0.17
LITAF-216ENST00000574848 ZFYVE9O95405 1425 aa16.1■□□□□ 0.17
LITAF-216ENST00000574848 SPHKAPQ2M3C7 1700 aa16.08■□□□□ 0.17
LITAF-216ENST00000574848 ITGAEP38570 1179 aa16.08■□□□□ 0.16
LITAF-216ENST00000574848 TXNDC2Q86VQ3 553 aa16.08■□□□□ 0.16
LITAF-216ENST00000574848 EID1Q9Y6B2 187 aa16.08■□□□□ 0.16
LITAF-216ENST00000574848 NUP155O75694 1391 aa16.08■□□□□ 0.16
LITAF-216ENST00000574848 HFM1A2PYH4 1435 aa16.08■□□□□ 0.16
LITAF-216ENST00000574848 LRRC7Q96NW7 1537 aa16.08■□□□□ 0.16
LITAF-216ENST00000574848 ALKQ9UM73 1620 aa16.08■□□□□ 0.16
LITAF-216ENST00000574848 NWD1Q149M9 1564 aa16.06■□□□□ 0.16
LITAF-216ENST00000574848 STAG3Q9UJ98 1225 aa16.05■□□□□ 0.16
LITAF-216ENST00000574848 XIRP1Q702N8 1843 aaKnown RBP16.04■□□□□ 0.16
LITAF-216ENST00000574848 UBAP1LF5GYI3 381 aa16.03■□□□□ 0.16
LITAF-216ENST00000574848 PLEKHG1Q9ULL1 1385 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms