RNA–Protein interactions for RNA: ENST00000574257.5

ABR-226, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-226ENST00000574257 LTBP4Q8N2S1 1624 aa18.6■□□□□ 0.57
ABR-226ENST00000574257 WASHC2CQ9Y4E1 1318 aa18.59■□□□□ 0.57
ABR-226ENST00000574257 MYO3AQ8NEV4 1616 aa18.59■□□□□ 0.57
ABR-226ENST00000574257 CEP170BQ9Y4F5 1589 aaPredicted RBP18.57■□□□□ 0.56
ABR-226ENST00000574257 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
ABR-226ENST00000574257 ZNF142P52746 1687 aaPredicted RBP18.57■□□□□ 0.56
ABR-226ENST00000574257 PKD2Q13563 968 aa18.56■□□□□ 0.56
ABR-226ENST00000574257 PLA2R1Q13018 1463 aa18.55■□□□□ 0.56
ABR-226ENST00000574257 MIA2Q96PC5 1412 aa18.55■□□□□ 0.56
ABR-226ENST00000574257 TNRQ92752 1358 aa18.55■□□□□ 0.56
ABR-226ENST00000574257 ZNF335Q9H4Z2 1342 aaPredicted RBP18.54■□□□□ 0.56
ABR-226ENST00000574257 A2ML1A8K2U0 1454 aa18.54■□□□□ 0.56
ABR-226ENST00000574257 TCOF1Q13428 1488 aaKnown RBP18.54■□□□□ 0.56
ABR-226ENST00000574257 KDM5DQ9BY66 1539 aa18.53■□□□□ 0.56
ABR-226ENST00000574257 DNMT1P26358 1616 aaKnown RBP18.52■□□□□ 0.56
ABR-226ENST00000574257 PZPP20742 1482 aa18.52■□□□□ 0.56
ABR-226ENST00000574257 MAST1Q9Y2H9 1570 aa18.52■□□□□ 0.56
ABR-226ENST00000574257 FAM135AQ9P2D6 1515 aa18.49■□□□□ 0.55
ABR-226ENST00000574257 APLP2Q06481 763 aa18.49■□□□□ 0.55
ABR-226ENST00000574257 SPATA31D1Q6ZQQ2 1576 aa18.49■□□□□ 0.55
ABR-226ENST00000574257 ABCC5O15440 1437 aa18.48■□□□□ 0.55
ABR-226ENST00000574257 RNF17Q9BXT8 1623 aaKnown RBP18.46■□□□□ 0.55
ABR-226ENST00000574257 RRP7BPQ9NSQ0 103 aa18.46■□□□□ 0.55
ABR-226ENST00000574257 CFAP65Q6ZU64 1925 aaKnown RBP18.46■□□□□ 0.55
ABR-226ENST00000574257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.45■□□□□ 0.54
ABR-226ENST00000574257 ABCC3O15438 1527 aa18.45■□□□□ 0.54
ABR-226ENST00000574257 THEMISQ8N1K5 641 aaPredicted RBP18.45■□□□□ 0.54
ABR-226ENST00000574257 IQSEC2Q5JU85 1478 aa18.45■□□□□ 0.54
ABR-226ENST00000574257 MROH1Q8NDA8 1641 aa18.44■□□□□ 0.54
ABR-226ENST00000574257 ANKLE2Q86XL3 938 aa18.43■□□□□ 0.54
ABR-226ENST00000574257 DUOX2Q9NRD8 1548 aa18.43■□□□□ 0.54
ABR-226ENST00000574257 PTPN23Q9H3S7 1636 aa18.42■□□□□ 0.54
ABR-226ENST00000574257 NLRP1Q9C000 1473 aa18.42■□□□□ 0.54
ABR-226ENST00000574257 NEURL4Q96JN8 1562 aa18.42■□□□□ 0.54
ABR-226ENST00000574257 KIF15Q9NS87 1388 aa18.42■□□□□ 0.54
ABR-226ENST00000574257 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
ABR-226ENST00000574257 CHIC2Q9UKJ5 165 aa18.41■□□□□ 0.54
ABR-226ENST00000574257 FGD6Q6ZV73 1430 aa18.4■□□□□ 0.54
ABR-226ENST00000574257 DAPK1P53355 1430 aa18.4■□□□□ 0.54
ABR-226ENST00000574257 UGGT1Q9NYU2 1555 aa18.39■□□□□ 0.53
ABR-226ENST00000574257 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
ABR-226ENST00000574257 ERVK-7P63135 1459 aa18.39■□□□□ 0.53
ABR-226ENST00000574257 CEP152O94986 1710 aa18.38■□□□□ 0.53
ABR-226ENST00000574257 POLR1AO95602 1720 aaPredicted RBP18.38■□□□□ 0.53
ABR-226ENST00000574257 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.38■□□□□ 0.53
ABR-226ENST00000574257 SHANK2Q9UPX8 1470 aa18.38■□□□□ 0.53
ABR-226ENST00000574257 ZC3H13Q5T200 1668 aaKnown RBP18.37■□□□□ 0.53
ABR-226ENST00000574257 CROCC2H7BZ55 1655 aa18.36■□□□□ 0.53
ABR-226ENST00000574257 MED14O60244 1454 aa18.34■□□□□ 0.53
ABR-226ENST00000574257 NPHP4O75161 1426 aaPredicted RBP18.34■□□□□ 0.53
ABR-226ENST00000574257 ERBINQ96RT1 1412 aa18.34■□□□□ 0.53
ABR-226ENST00000574257 ARHGAP31Q2M1Z3 1444 aa18.32■□□□□ 0.52
ABR-226ENST00000574257 ANKRD30AQ9BXX3 1397 aa18.31■□□□□ 0.52
ABR-226ENST00000574257 DEPDC5O75140 1603 aa18.31■□□□□ 0.52
ABR-226ENST00000574257 VWDEQ8N2E2 1590 aa18.31■□□□□ 0.52
ABR-226ENST00000574257 PRDM15P57071 1507 aaPredicted RBP18.31■□□□□ 0.52
ABR-226ENST00000574257 LTKP29376 864 aa18.3■□□□□ 0.52
ABR-226ENST00000574257 FAM50AQ14320 339 aaKnown RBP18.3■□□□□ 0.52
ABR-226ENST00000574257 UBR1Q8IWV7 1749 aa18.29■□□□□ 0.52
ABR-226ENST00000574257 CPS1P31327 1500 aa18.28■□□□□ 0.52
ABR-226ENST00000574257 TXNDC2Q86VQ3 553 aa18.27■□□□□ 0.52
ABR-226ENST00000574257 KANK1Q14678 1352 aa18.27■□□□□ 0.51
ABR-226ENST00000574257 IQGAP1P46940 1657 aa18.26■□□□□ 0.51
ABR-226ENST00000574257 PIP4K2BP78356 416 aa18.26■□□□□ 0.51
ABR-226ENST00000574257 IDI1Q13907 227 aa18.26■□□□□ 0.51
ABR-226ENST00000574257 STRCP1A6NGW2 1772 aa18.25■□□□□ 0.51
ABR-226ENST00000574257 TOM1O60784 492 aa18.24■□□□□ 0.51
ABR-226ENST00000574257 ADGRL2O95490 1459 aa18.24■□□□□ 0.51
ABR-226ENST00000574257 ARHGAP23Q9P227 1491 aa18.24■□□□□ 0.51
ABR-226ENST00000574257 LMTK2Q8IWU2 1503 aa18.23■□□□□ 0.51
ABR-226ENST00000574257 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
ABR-226ENST00000574257 SCAF11Q99590 1463 aaKnown RBP18.22■□□□□ 0.51
ABR-226ENST00000574257 HSPA1LP34931 641 aa18.22■□□□□ 0.51
ABR-226ENST00000574257 SLIT1O75093 1534 aa18.22■□□□□ 0.51
ABR-226ENST00000574257 PIK3C2BO00750 1634 aa18.21■□□□□ 0.51
ABR-226ENST00000574257 LRRC7Q96NW7 1537 aa18.2■□□□□ 0.5
ABR-226ENST00000574257 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
ABR-226ENST00000574257 EID1Q9Y6B2 187 aa18.2■□□□□ 0.5
ABR-226ENST00000574257 ANKRD50Q9ULJ7 1429 aa18.2■□□□□ 0.5
ABR-226ENST00000574257 ALKQ9UM73 1620 aa18.2■□□□□ 0.5
ABR-226ENST00000574257 TMEM2Q9UHN6 1383 aa18.19■□□□□ 0.5
ABR-226ENST00000574257 NOS1P29475 1434 aa18.19■□□□□ 0.5
ABR-226ENST00000574257 PPARGC1BQ86YN6 1023 aaKnown RBP18.18■□□□□ 0.5
ABR-226ENST00000574257 SYNMO15061 1565 aa18.17■□□□□ 0.5
ABR-226ENST00000574257 EFCAB6Q5THR3 1501 aa18.15■□□□□ 0.5
ABR-226ENST00000574257 SLC52A1Q9NWF4 448 aa18.15■□□□□ 0.5
ABR-226ENST00000574257 SLC26A8Q96RN1 970 aa18.12■□□□□ 0.49
ABR-226ENST00000574257 KDM5AP29375 1690 aaKnown RBP18.11■□□□□ 0.49
ABR-226ENST00000574257 TET3O43151 1660 aa18.1■□□□□ 0.49
ABR-226ENST00000574257 ITGAEP38570 1179 aa18.1■□□□□ 0.49
ABR-226ENST00000574257 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
ABR-226ENST00000574257 XIRP1Q702N8 1843 aaKnown RBP18.09■□□□□ 0.49
ABR-226ENST00000574257 ROCK1Q13464 1354 aa18.09■□□□□ 0.49
ABR-226ENST00000574257 RPRD2Q5VT52 1461 aaKnown RBP18.08■□□□□ 0.49
ABR-226ENST00000574257 KCNA6P17658 529 aa18.08■□□□□ 0.48
ABR-226ENST00000574257 ADGRB3O60242 1522 aa18.08■□□□□ 0.48
ABR-226ENST00000574257 RBM33Q96EV2 1170 aaKnown RBP18.07■□□□□ 0.48
ABR-226ENST00000574257 MYO5BQ9ULV0 1848 aa18.06■□□□□ 0.48
ABR-226ENST00000574257 UNC13BO14795 1591 aa18.05■□□□□ 0.48
ABR-226ENST00000574257 PROSER2Q86WR7 435 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms