RNA–Protein interactions for RNA: ENST00000574257.5

ABR-226, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-226ENST00000574257 NISCHQ9Y2I1 1504 aa29.42■■■□□ 2.3
ABR-226ENST00000574257 ABCC9O60706 1549 aa26.33■■□□□ 1.81
ABR-226ENST00000574257 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
ABR-226ENST00000574257 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
ABR-226ENST00000574257 DCAF8L2P0C7V8 631 aa24.89■■□□□ 1.58
ABR-226ENST00000574257 NACADO15069 1562 aa24.87■■□□□ 1.57
ABR-226ENST00000574257 DNAJC5BQ9UF47 199 aa24.77■■□□□ 1.56
ABR-226ENST00000574257 PABPN1Q86U42 306 aaKnown RBP eCLIP24.6■■□□□ 1.53
ABR-226ENST00000574257 MYO15BQ96JP2 1530 aa24.54■■□□□ 1.52
ABR-226ENST00000574257 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
ABR-226ENST00000574257 ZCCHC6Q5VYS8 1495 aaKnown RBP24.37■■□□□ 1.49
ABR-226ENST00000574257 BICRAQ9NZM4 1560 aa24.36■■□□□ 1.49
ABR-226ENST00000574257 DCAF1Q9Y4B6 1507 aa24.26■■□□□ 1.47
ABR-226ENST00000574257 SCRIBQ14160 1630 aa24.01■■□□□ 1.43
ABR-226ENST00000574257 SHROOM4Q9ULL8 1493 aa23.91■■□□□ 1.42
ABR-226ENST00000574257 CC2D2AQ9P2K1 1620 aa23.75■■□□□ 1.39
ABR-226ENST00000574257 EIF4G1Q04637 1599 aaKnown RBP23.71■■□□□ 1.39
ABR-226ENST00000574257 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
ABR-226ENST00000574257 DNAJC5Q9H3Z4 198 aa23.31■■□□□ 1.32
ABR-226ENST00000574257 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
ABR-226ENST00000574257 ATAD2BQ9ULI0 1458 aa22.95■■□□□ 1.26
ABR-226ENST00000574257 SMARCA4P51532 1647 aa22.9■■□□□ 1.26
ABR-226ENST00000574257 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
ABR-226ENST00000574257 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
ABR-226ENST00000574257 HMGXB3Q12766 1538 aa22.77■■□□□ 1.24
ABR-226ENST00000574257 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.22
ABR-226ENST00000574257 BAZ1BQ9UIG0 1483 aaKnown RBP22.69■■□□□ 1.22
ABR-226ENST00000574257 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
ABR-226ENST00000574257 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
ABR-226ENST00000574257 NESP48681 1621 aa22.66■■□□□ 1.22
ABR-226ENST00000574257 CUX2O14529 1486 aa22.6■■□□□ 1.21
ABR-226ENST00000574257 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
ABR-226ENST00000574257 WIZO95785 1651 aa22.41■■□□□ 1.18
ABR-226ENST00000574257 CADPSQ9ULU8 1353 aa22.33■■□□□ 1.17
ABR-226ENST00000574257 THOC2Q8NI27 1593 aaKnown RBP22.33■■□□□ 1.16
ABR-226ENST00000574257 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
ABR-226ENST00000574257 KIF21AQ7Z4S6 1674 aa22.3■■□□□ 1.16
ABR-226ENST00000574257 RSF1Q96T23 1441 aaPredicted RBP22.27■■□□□ 1.16
ABR-226ENST00000574257 MRC2Q9UBG0 1479 aa22.11■■□□□ 1.13
ABR-226ENST00000574257 TOP2AP11388 1531 aaKnown RBP22.09■■□□□ 1.13
ABR-226ENST00000574257 CFTRP13569 1480 aa22.07■■□□□ 1.12
ABR-226ENST00000574257 WDR62O43379 1518 aa22.05■■□□□ 1.12
ABR-226ENST00000574257 FANCD2Q9BXW9 1451 aa22.04■■□□□ 1.12
ABR-226ENST00000574257 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
ABR-226ENST00000574257 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
ABR-226ENST00000574257 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
ABR-226ENST00000574257 TRIM41Q8WV44 630 aa21.85■■□□□ 1.09
ABR-226ENST00000574257 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
ABR-226ENST00000574257 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
ABR-226ENST00000574257 TOPBP1Q92547 1522 aa21.64■■□□□ 1.05
ABR-226ENST00000574257 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
ABR-226ENST00000574257 IFT140Q96RY7 1462 aa21.6■■□□□ 1.05
ABR-226ENST00000574257 ABCC8Q09428 1581 aa21.56■■□□□ 1.04
ABR-226ENST00000574257 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
ABR-226ENST00000574257 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.02
ABR-226ENST00000574257 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
ABR-226ENST00000574257 POLA1P09884 1462 aaPredicted RBP21.43■■□□□ 1.02
ABR-226ENST00000574257 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
ABR-226ENST00000574257 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
ABR-226ENST00000574257 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
ABR-226ENST00000574257 SOGA1O94964 1423 aa21.36■■□□□ 1.01
ABR-226ENST00000574257 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
ABR-226ENST00000574257 RIMBP3CA6NJZ7 1639 aa21.32■■□□□ 1
ABR-226ENST00000574257 RIMBP3BA6NNM3 1639 aa21.32■■□□□ 1
ABR-226ENST00000574257 RIMBP3Q9UFD9 1639 aa21.32■■□□□ 1
ABR-226ENST00000574257 CUX1P39880 1505 aa21.3■■□□□ 1
ABR-226ENST00000574257 FGD5Q6ZNL6 1462 aa21.29■■□□□ 1
ABR-226ENST00000574257 FBLN2P98095 1184 aa21.29■■□□□ 1
ABR-226ENST00000574257 CHD1O14646 1710 aa21.26■□□□□ 0.99
ABR-226ENST00000574257 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
ABR-226ENST00000574257 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
ABR-226ENST00000574257 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
ABR-226ENST00000574257 CHMP7Q8WUX9 453 aaPredicted RBP21.14■□□□□ 0.97
ABR-226ENST00000574257 WDR97A6NE52 1622 aa21.13■□□□□ 0.97
ABR-226ENST00000574257 GRIN2BQ13224 1484 aa21.12■□□□□ 0.97
ABR-226ENST00000574257 MAGI1Q96QZ7 1491 aaPredicted RBP21.09■□□□□ 0.97
ABR-226ENST00000574257 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
ABR-226ENST00000574257 ARAP1Q96P48 1450 aa21.07■□□□□ 0.96
ABR-226ENST00000574257 ABCA10Q8WWZ4 1543 aa21.05■□□□□ 0.96
ABR-226ENST00000574257 SYNJ2O15056 1496 aa21.04■□□□□ 0.96
ABR-226ENST00000574257 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
ABR-226ENST00000574257 PBRM1Q86U86 1689 aa20.99■□□□□ 0.95
ABR-226ENST00000574257 SYNJ1O43426 1573 aa20.99■□□□□ 0.95
ABR-226ENST00000574257 WRNQ14191 1432 aaPredicted RBP eCLIP20.98■□□□□ 0.95
ABR-226ENST00000574257 ABCA5Q8WWZ7 1642 aa20.98■□□□□ 0.95
ABR-226ENST00000574257 TOP2BQ02880 1626 aa20.94■□□□□ 0.94
ABR-226ENST00000574257 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
ABR-226ENST00000574257 TRHP20396 242 aaPredicted RBP20.89■□□□□ 0.93
ABR-226ENST00000574257 GRIN2AQ12879 1464 aa20.84■□□□□ 0.93
ABR-226ENST00000574257 ADAMTS12P58397 1594 aa20.81■□□□□ 0.92
ABR-226ENST00000574257 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
ABR-226ENST00000574257 NUP160Q12769 1436 aa20.79■□□□□ 0.92
ABR-226ENST00000574257 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
ABR-226ENST00000574257 ERCC6L2Q5T890 1561 aa20.77■□□□□ 0.92
ABR-226ENST00000574257 ERICH3Q5RHP9 1530 aa20.76■□□□□ 0.91
ABR-226ENST00000574257 AEBP2Q6ZN18 517 aaPredicted RBP20.73■□□□□ 0.91
ABR-226ENST00000574257 SHROOM2Q13796 1616 aa20.66■□□□□ 0.9
ABR-226ENST00000574257 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
ABR-226ENST00000574257 IGF1RP08069 1367 aa20.62■□□□□ 0.89
ABR-226ENST00000574257 PRG4Q92954 1404 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms