RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 TOM1O60784 492 aa19.8■□□□□ 0.76
PRPF8-208ENST00000573716 TNRQ92752 1358 aa19.78■□□□□ 0.76
PRPF8-208ENST00000573716 CPS1P31327 1500 aa19.77■□□□□ 0.76
PRPF8-208ENST00000573716 FBXO31Q5XUX0 539 aaPredicted RBP19.77■□□□□ 0.76
PRPF8-208ENST00000573716 SHANK2Q9UPX8 1470 aa19.77■□□□□ 0.76
PRPF8-208ENST00000573716 NEURL4Q96JN8 1562 aa19.77■□□□□ 0.76
PRPF8-208ENST00000573716 TIAM1Q13009 1591 aa19.75■□□□□ 0.75
PRPF8-208ENST00000573716 KIF3BO15066 747 aa19.75■□□□□ 0.75
PRPF8-208ENST00000573716 DHX29Q7Z478 1369 aaKnown RBP19.72■□□□□ 0.75
PRPF8-208ENST00000573716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.72■□□□□ 0.75
PRPF8-208ENST00000573716 ANKLE2Q86XL3 938 aa19.72■□□□□ 0.75
PRPF8-208ENST00000573716 MBD5Q9P267 1494 aa19.72■□□□□ 0.75
PRPF8-208ENST00000573716 KDM5DQ9BY66 1539 aa19.71■□□□□ 0.75
PRPF8-208ENST00000573716 WASHC2CQ9Y4E1 1318 aa19.71■□□□□ 0.75
PRPF8-208ENST00000573716 RTEL1-TNFRSF6BF6WH68 1400 aa19.7■□□□□ 0.74
PRPF8-208ENST00000573716 PZPP20742 1482 aa19.7■□□□□ 0.74
PRPF8-208ENST00000573716 THEMISQ8N1K5 641 aaPredicted RBP19.69■□□□□ 0.74
PRPF8-208ENST00000573716 VWDEQ8N2E2 1590 aa19.69■□□□□ 0.74
PRPF8-208ENST00000573716 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
PRPF8-208ENST00000573716 NPHP4O75161 1426 aaPredicted RBP19.67■□□□□ 0.74
PRPF8-208ENST00000573716 UGGT1Q9NYU2 1555 aa19.66■□□□□ 0.74
PRPF8-208ENST00000573716 FAM135AQ9P2D6 1515 aa19.66■□□□□ 0.74
PRPF8-208ENST00000573716 MIA2Q96PC5 1412 aa19.65■□□□□ 0.74
PRPF8-208ENST00000573716 CCDC141Q6ZP82 1450 aa19.65■□□□□ 0.74
PRPF8-208ENST00000573716 NLRP1Q9C000 1473 aa19.64■□□□□ 0.73
PRPF8-208ENST00000573716 IQGAP1P46940 1657 aa19.64■□□□□ 0.73
PRPF8-208ENST00000573716 DEPDC5O75140 1603 aa19.63■□□□□ 0.73
PRPF8-208ENST00000573716 CAMSAP2Q08AD1 1489 aa19.63■□□□□ 0.73
PRPF8-208ENST00000573716 ALKQ9UM73 1620 aa19.62■□□□□ 0.73
PRPF8-208ENST00000573716 CEP162Q5TB80 1403 aa19.61■□□□□ 0.73
PRPF8-208ENST00000573716 MED14O60244 1454 aa19.6■□□□□ 0.73
PRPF8-208ENST00000573716 STRCP1A6NGW2 1772 aa19.6■□□□□ 0.73
PRPF8-208ENST00000573716 RNF17Q9BXT8 1623 aaKnown RBP19.58■□□□□ 0.72
PRPF8-208ENST00000573716 LRRC7Q96NW7 1537 aa19.57■□□□□ 0.72
PRPF8-208ENST00000573716 NCOA2Q15596 1464 aa19.57■□□□□ 0.72
PRPF8-208ENST00000573716 TSPY4P0CV99 314 aa19.56■□□□□ 0.72
PRPF8-208ENST00000573716 TSPY10P0CW01 314 aa19.56■□□□□ 0.72
PRPF8-208ENST00000573716 CFAP65Q6ZU64 1925 aaKnown RBP19.56■□□□□ 0.72
PRPF8-208ENST00000573716 SYNMO15061 1565 aa19.55■□□□□ 0.72
PRPF8-208ENST00000573716 RSPH4AQ5TD94 716 aa19.55■□□□□ 0.72
PRPF8-208ENST00000573716 ABCC3O15438 1527 aa19.53■□□□□ 0.72
PRPF8-208ENST00000573716 ARHGEF5Q12774 1597 aa19.52■□□□□ 0.71
PRPF8-208ENST00000573716 ZC3H13Q5T200 1668 aaKnown RBP19.52■□□□□ 0.71
PRPF8-208ENST00000573716 ERVK-7P63135 1459 aa19.5■□□□□ 0.71
PRPF8-208ENST00000573716 CEP152O94986 1710 aa19.5■□□□□ 0.71
PRPF8-208ENST00000573716 UBR1Q8IWV7 1749 aa19.49■□□□□ 0.71
PRPF8-208ENST00000573716 SCAF11Q99590 1463 aaKnown RBP19.47■□□□□ 0.71
PRPF8-208ENST00000573716 EIF2AK4Q9P2K8 1649 aaKnown RBP19.44■□□□□ 0.7
PRPF8-208ENST00000573716 TXNDC2Q86VQ3 553 aa19.44■□□□□ 0.7
PRPF8-208ENST00000573716 RGS17Q9UGC6 210 aaPredicted RBP19.44■□□□□ 0.7
PRPF8-208ENST00000573716 XIRP1Q702N8 1843 aaKnown RBP19.44■□□□□ 0.7
PRPF8-208ENST00000573716 MROH1Q8NDA8 1641 aa19.43■□□□□ 0.7
PRPF8-208ENST00000573716 MAST1Q9Y2H9 1570 aa19.42■□□□□ 0.7
PRPF8-208ENST00000573716 LTKP29376 864 aa19.42■□□□□ 0.7
PRPF8-208ENST00000573716 EID1Q9Y6B2 187 aa19.41■□□□□ 0.7
PRPF8-208ENST00000573716 STAG3Q9UJ98 1225 aa19.38■□□□□ 0.69
PRPF8-208ENST00000573716 SLIT1O75093 1534 aa19.37■□□□□ 0.69
PRPF8-208ENST00000573716 ARHGAP23Q9P227 1491 aa19.37■□□□□ 0.69
PRPF8-208ENST00000573716 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.36■□□□□ 0.69
PRPF8-208ENST00000573716 PIK3C2BO00750 1634 aa19.36■□□□□ 0.69
PRPF8-208ENST00000573716 DUOX2Q9NRD8 1548 aa19.35■□□□□ 0.69
PRPF8-208ENST00000573716 LRRC9Q6ZRR7 1453 aa19.35■□□□□ 0.69
PRPF8-208ENST00000573716 POTEAQ6S8J7 498 aa19.35■□□□□ 0.69
PRPF8-208ENST00000573716 RBM33Q96EV2 1170 aaKnown RBP19.33■□□□□ 0.68
PRPF8-208ENST00000573716 ROBO1Q9Y6N7 1651 aa19.33■□□□□ 0.68
PRPF8-208ENST00000573716 FAM135BQ49AJ0 1406 aa19.33■□□□□ 0.68
PRPF8-208ENST00000573716 TMEM94Q12767 1356 aa19.32■□□□□ 0.68
PRPF8-208ENST00000573716 KIF15Q9NS87 1388 aa19.32■□□□□ 0.68
PRPF8-208ENST00000573716 PROSER2Q86WR7 435 aaPredicted RBP19.31■□□□□ 0.68
PRPF8-208ENST00000573716 TMEM2Q9UHN6 1383 aa19.31■□□□□ 0.68
PRPF8-208ENST00000573716 PRDM15P57071 1507 aaPredicted RBP19.3■□□□□ 0.68
PRPF8-208ENST00000573716 SLC26A8Q96RN1 970 aa19.3■□□□□ 0.68
PRPF8-208ENST00000573716 RRP7BPQ9NSQ0 103 aa19.3■□□□□ 0.68
PRPF8-208ENST00000573716 MYOM3Q5VTT5 1437 aa19.3■□□□□ 0.68
PRPF8-208ENST00000573716 ARHGAP31Q2M1Z3 1444 aa19.29■□□□□ 0.68
PRPF8-208ENST00000573716 SETD1AO15047 1707 aaKnown RBP19.28■□□□□ 0.68
PRPF8-208ENST00000573716 KANK4Q5T7N3 995 aaPredicted RBP19.28■□□□□ 0.68
PRPF8-208ENST00000573716 BCANQ96GW7 911 aa19.28■□□□□ 0.68
PRPF8-208ENST00000573716 EFCAB6Q5THR3 1501 aa19.28■□□□□ 0.68
PRPF8-208ENST00000573716 KANK1Q14678 1352 aa19.28■□□□□ 0.68
PRPF8-208ENST00000573716 KCNA6P17658 529 aa19.27■□□□□ 0.68
PRPF8-208ENST00000573716 VPS8Q8N3P4 1428 aa19.26■□□□□ 0.67
PRPF8-208ENST00000573716 CROCC2H7BZ55 1655 aa19.26■□□□□ 0.67
PRPF8-208ENST00000573716 ERBINQ96RT1 1412 aa19.25■□□□□ 0.67
PRPF8-208ENST00000573716 MAP3K1Q13233 1512 aa19.25■□□□□ 0.67
PRPF8-208ENST00000573716 PHLPP1O60346 1717 aa19.24■□□□□ 0.67
PRPF8-208ENST00000573716 IDI1Q13907 227 aa19.23■□□□□ 0.67
PRPF8-208ENST00000573716 MSH6P52701 1360 aa19.22■□□□□ 0.67
PRPF8-208ENST00000573716 KDM5AP29375 1690 aaKnown RBP19.22■□□□□ 0.67
PRPF8-208ENST00000573716 ABCC5O15440 1437 aa19.21■□□□□ 0.67
PRPF8-208ENST00000573716 TET3O43151 1660 aa19.2■□□□□ 0.66
PRPF8-208ENST00000573716 PTPN23Q9H3S7 1636 aa19.2■□□□□ 0.66
PRPF8-208ENST00000573716 CHIC2Q9UKJ5 165 aa19.19■□□□□ 0.66
PRPF8-208ENST00000573716 NKTRP30414 1462 aaKnown RBP19.19■□□□□ 0.66
PRPF8-208ENST00000573716 SLAIN2Q9P270 581 aa19.18■□□□□ 0.66
PRPF8-208ENST00000573716 ADGRB3O60242 1522 aa19.18■□□□□ 0.66
PRPF8-208ENST00000573716 NWD1Q149M9 1564 aa19.18■□□□□ 0.66
PRPF8-208ENST00000573716 JCADQ9P266 1359 aa19.17■□□□□ 0.66
PRPF8-208ENST00000573716 DAPK1P53355 1430 aa19.17■□□□□ 0.66
PRPF8-208ENST00000573716 PPP1R15AO75807 674 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms