RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 CROCC2H7BZ55 1655 aa19.71■□□□□ 0.75
NPLOC4-213ENST00000573519 TCOF1Q13428 1488 aaKnown RBP19.71■□□□□ 0.75
NPLOC4-213ENST00000573519 DAPK1P53355 1430 aa19.7■□□□□ 0.74
NPLOC4-213ENST00000573519 SHANK2Q9UPX8 1470 aa19.7■□□□□ 0.74
NPLOC4-213ENST00000573519 FAM135AQ9P2D6 1515 aa19.7■□□□□ 0.74
NPLOC4-213ENST00000573519 CAMSAP1Q5T5Y3 1602 aa19.69■□□□□ 0.74
NPLOC4-213ENST00000573519 RRP7BPQ9NSQ0 103 aa19.69■□□□□ 0.74
NPLOC4-213ENST00000573519 DUOX2Q9NRD8 1548 aa19.69■□□□□ 0.74
NPLOC4-213ENST00000573519 DNMT1P26358 1616 aaKnown RBP19.69■□□□□ 0.74
NPLOC4-213ENST00000573519 KIF15Q9NS87 1388 aa19.69■□□□□ 0.74
NPLOC4-213ENST00000573519 EIF2AK4Q9P2K8 1649 aaKnown RBP19.69■□□□□ 0.74
NPLOC4-213ENST00000573519 FAM50AQ14320 339 aaKnown RBP19.68■□□□□ 0.74
NPLOC4-213ENST00000573519 FBXO31Q5XUX0 539 aaPredicted RBP19.68■□□□□ 0.74
NPLOC4-213ENST00000573519 CHIC2Q9UKJ5 165 aa19.68■□□□□ 0.74
NPLOC4-213ENST00000573519 CEP170BQ9Y4F5 1589 aaPredicted RBP19.68■□□□□ 0.74
NPLOC4-213ENST00000573519 RNF17Q9BXT8 1623 aaKnown RBP19.68■□□□□ 0.74
NPLOC4-213ENST00000573519 NCOA1Q15788 1441 aa19.68■□□□□ 0.74
NPLOC4-213ENST00000573519 FBXO41Q8TF61 875 aa19.67■□□□□ 0.74
NPLOC4-213ENST00000573519 PZPP20742 1482 aa19.67■□□□□ 0.74
NPLOC4-213ENST00000573519 ZNF142P52746 1687 aaPredicted RBP19.66■□□□□ 0.74
NPLOC4-213ENST00000573519 TNRQ92752 1358 aa19.65■□□□□ 0.74
NPLOC4-213ENST00000573519 ZC3H13Q5T200 1668 aaKnown RBP19.63■□□□□ 0.73
NPLOC4-213ENST00000573519 ABCC3O15438 1527 aa19.63■□□□□ 0.73
NPLOC4-213ENST00000573519 PTPRTO14522 1441 aa19.63■□□□□ 0.73
NPLOC4-213ENST00000573519 NCKAP5LQ9HCH0 1330 aa19.63■□□□□ 0.73
NPLOC4-213ENST00000573519 CERKQ8TCT0 537 aa19.63■□□□□ 0.73
NPLOC4-213ENST00000573519 A2ML1A8K2U0 1454 aa19.62■□□□□ 0.73
NPLOC4-213ENST00000573519 ERBINQ96RT1 1412 aa19.62■□□□□ 0.73
NPLOC4-213ENST00000573519 ANKRD30AQ9BXX3 1397 aa19.62■□□□□ 0.73
NPLOC4-213ENST00000573519 MROH1Q8NDA8 1641 aa19.62■□□□□ 0.73
NPLOC4-213ENST00000573519 PPARGC1BQ86YN6 1023 aaKnown RBP19.61■□□□□ 0.73
NPLOC4-213ENST00000573519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.61■□□□□ 0.736e-8■■□□□ 14.5
NPLOC4-213ENST00000573519 PLA2R1Q13018 1463 aa19.59■□□□□ 0.73
NPLOC4-213ENST00000573519 CEP152O94986 1710 aa19.59■□□□□ 0.73
NPLOC4-213ENST00000573519 PKD2Q13563 968 aa19.57■□□□□ 0.72
NPLOC4-213ENST00000573519 PRDM15P57071 1507 aaPredicted RBP19.56■□□□□ 0.72
NPLOC4-213ENST00000573519 KANK1Q14678 1352 aa19.55■□□□□ 0.72
NPLOC4-213ENST00000573519 NLRP1Q9C000 1473 aa19.54■□□□□ 0.72
NPLOC4-213ENST00000573519 ERVK-7P63135 1459 aa19.54■□□□□ 0.72
NPLOC4-213ENST00000573519 ADGRL2O95490 1459 aa19.53■□□□□ 0.72
NPLOC4-213ENST00000573519 SPATA31D1Q6ZQQ2 1576 aa19.53■□□□□ 0.72
NPLOC4-213ENST00000573519 UGGT1Q9NYU2 1555 aa19.53■□□□□ 0.72
NPLOC4-213ENST00000573519 DEPDC5O75140 1603 aa19.52■□□□□ 0.72
NPLOC4-213ENST00000573519 THEMISQ8N1K5 641 aaPredicted RBP19.51■□□□□ 0.71
NPLOC4-213ENST00000573519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.51■□□□□ 0.71
NPLOC4-213ENST00000573519 ITGAEP38570 1179 aa19.49■□□□□ 0.71
NPLOC4-213ENST00000573519 ZNF335Q9H4Z2 1342 aaPredicted RBP19.49■□□□□ 0.71
NPLOC4-213ENST00000573519 LTBP4Q8N2S1 1624 aa19.48■□□□□ 0.71
NPLOC4-213ENST00000573519 POLR1AO95602 1720 aaPredicted RBP19.48■□□□□ 0.71
NPLOC4-213ENST00000573519 ANKLE2Q86XL3 938 aa19.47■□□□□ 0.71
NPLOC4-213ENST00000573519 ARHGAP31Q2M1Z3 1444 aa19.47■□□□□ 0.71
NPLOC4-213ENST00000573519 ANKRD50Q9ULJ7 1429 aa19.47■□□□□ 0.71
NPLOC4-213ENST00000573519 CFAP65Q6ZU64 1925 aaKnown RBP19.45■□□□□ 0.7
NPLOC4-213ENST00000573519 NEURL4Q96JN8 1562 aa19.44■□□□□ 0.7
NPLOC4-213ENST00000573519 LMTK2Q8IWU2 1503 aa19.43■□□□□ 0.7
NPLOC4-213ENST00000573519 VWDEQ8N2E2 1590 aa19.43■□□□□ 0.7
NPLOC4-213ENST00000573519 STAG3Q9UJ98 1225 aa19.4■□□□□ 0.7
NPLOC4-213ENST00000573519 NPHP4O75161 1426 aaPredicted RBP19.4■□□□□ 0.7
NPLOC4-213ENST00000573519 EFCAB6Q5THR3 1501 aa19.4■□□□□ 0.7
NPLOC4-213ENST00000573519 UBR1Q8IWV7 1749 aa19.39■□□□□ 0.7
NPLOC4-213ENST00000573519 ROCK1Q13464 1354 aa19.39■□□□□ 0.69
NPLOC4-213ENST00000573519 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
NPLOC4-213ENST00000573519 PIK3C2BO00750 1634 aa19.36■□□□□ 0.69
NPLOC4-213ENST00000573519 MED14O60244 1454 aa19.36■□□□□ 0.69
NPLOC4-213ENST00000573519 IQGAP1P46940 1657 aa19.36■□□□□ 0.69
NPLOC4-213ENST00000573519 UNC13BO14795 1591 aa19.35■□□□□ 0.69
NPLOC4-213ENST00000573519 IDI1Q13907 227 aa19.34■□□□□ 0.69
NPLOC4-213ENST00000573519 TXNDC2Q86VQ3 553 aa19.34■□□□□ 0.69
NPLOC4-213ENST00000573519 SYNMO15061 1565 aa19.34■□□□□ 0.69
NPLOC4-213ENST00000573519 EID1Q9Y6B2 187 aa19.33■□□□□ 0.68
NPLOC4-213ENST00000573519 SCAF11Q99590 1463 aaKnown RBP19.33■□□□□ 0.68
NPLOC4-213ENST00000573519 TET3O43151 1660 aa19.32■□□□□ 0.68
NPLOC4-213ENST00000573519 NOS1P29475 1434 aa19.32■□□□□ 0.68
NPLOC4-213ENST00000573519 SLIT1O75093 1534 aa19.31■□□□□ 0.68
NPLOC4-213ENST00000573519 RPRD2Q5VT52 1461 aaKnown RBP19.31■□□□□ 0.68
NPLOC4-213ENST00000573519 UBAP1LF5GYI3 381 aa19.31■□□□□ 0.68
NPLOC4-213ENST00000573519 LTKP29376 864 aa19.31■□□□□ 0.68
NPLOC4-213ENST00000573519 RRBP1Q9P2E9 1410 aaKnown RBP19.31■□□□□ 0.68
NPLOC4-213ENST00000573519 CPS1P31327 1500 aa19.3■□□□□ 0.68
NPLOC4-213ENST00000573519 ARHGAP23Q9P227 1491 aa19.3■□□□□ 0.68
NPLOC4-213ENST00000573519 GCC2Q8IWJ2 1684 aa19.29■□□□□ 0.68
NPLOC4-213ENST00000573519 NUP155O75694 1391 aa19.29■□□□□ 0.68
NPLOC4-213ENST00000573519 TMEM2Q9UHN6 1383 aa19.29■□□□□ 0.68
NPLOC4-213ENST00000573519 SLC52A1Q9NWF4 448 aa19.28■□□□□ 0.68
NPLOC4-213ENST00000573519 ADGRB3O60242 1522 aa19.27■□□□□ 0.68
NPLOC4-213ENST00000573519 IQGAP3Q86VI3 1631 aa19.27■□□□□ 0.68
NPLOC4-213ENST00000573519 KDM5AP29375 1690 aaKnown RBP19.27■□□□□ 0.67
NPLOC4-213ENST00000573519 E9PCH4 1651 aa19.25■□□□□ 0.67
NPLOC4-213ENST00000573519 SCAF1Q9H7N4 1312 aaKnown RBP19.24■□□□□ 0.67
NPLOC4-213ENST00000573519 CHGAP10645 457 aaKnown RBP19.23■□□□□ 0.67
NPLOC4-213ENST00000573519 BCANQ96GW7 911 aa19.22■□□□□ 0.67
NPLOC4-213ENST00000573519 SENP3Q9H4L4 574 aaPredicted RBP19.21■□□□□ 0.67
NPLOC4-213ENST00000573519 STRCP1A6NGW2 1772 aa19.2■□□□□ 0.66
NPLOC4-213ENST00000573519 PIP4K2BP78356 416 aa19.2■□□□□ 0.66
NPLOC4-213ENST00000573519 TOM1O60784 492 aa19.19■□□□□ 0.66
NPLOC4-213ENST00000573519 NAIPQ13075 1403 aa19.18■□□□□ 0.66
NPLOC4-213ENST00000573519 PPP1R15AO75807 674 aaPredicted RBP19.18■□□□□ 0.66
NPLOC4-213ENST00000573519 SLC26A8Q96RN1 970 aa19.18■□□□□ 0.66
NPLOC4-213ENST00000573519 LRRC7Q96NW7 1537 aa19.17■□□□□ 0.66
NPLOC4-213ENST00000573519 TMEM131LA2VDJ0 1609 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms