RNA–Protein interactions for RNA: ENST00000571277.1

LITAF-206, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-206ENST00000571277 KDM5DQ9BY66 1539 aa17.94■□□□□ 0.46
LITAF-206ENST00000571277 TSPY4P0CV99 314 aa17.93■□□□□ 0.46
LITAF-206ENST00000571277 TSPY10P0CW01 314 aa17.93■□□□□ 0.46
LITAF-206ENST00000571277 RNF17Q9BXT8 1623 aaKnown RBP17.91■□□□□ 0.46
LITAF-206ENST00000571277 PLA2R1Q13018 1463 aa17.91■□□□□ 0.46
LITAF-206ENST00000571277 LTBP4Q8N2S1 1624 aa17.9■□□□□ 0.46
LITAF-206ENST00000571277 PZPP20742 1482 aa17.9■□□□□ 0.46
LITAF-206ENST00000571277 A2ML1A8K2U0 1454 aa17.89■□□□□ 0.45
LITAF-206ENST00000571277 TCOF1Q13428 1488 aaKnown RBP17.89■□□□□ 0.45
LITAF-206ENST00000571277 FBXO31Q5XUX0 539 aaPredicted RBP17.89■□□□□ 0.45
LITAF-206ENST00000571277 EIF2AK4Q9P2K8 1649 aaKnown RBP17.89■□□□□ 0.45
LITAF-206ENST00000571277 DNMT1P26358 1616 aaKnown RBP17.88■□□□□ 0.45
LITAF-206ENST00000571277 NCKAP5LQ9HCH0 1330 aa17.88■□□□□ 0.45
LITAF-206ENST00000571277 WASHC2CQ9Y4E1 1318 aa17.88■□□□□ 0.45
LITAF-206ENST00000571277 MROH1Q8NDA8 1641 aa17.87■□□□□ 0.45
LITAF-206ENST00000571277 CROCC2H7BZ55 1655 aa17.87■□□□□ 0.45
LITAF-206ENST00000571277 PTPN23Q9H3S7 1636 aa17.87■□□□□ 0.45
LITAF-206ENST00000571277 TNRQ92752 1358 aa17.86■□□□□ 0.45
LITAF-206ENST00000571277 ABCC3O15438 1527 aa17.85■□□□□ 0.45
LITAF-206ENST00000571277 ABCC5O15440 1437 aa17.85■□□□□ 0.45
LITAF-206ENST00000571277 SHANK2Q9UPX8 1470 aa17.85■□□□□ 0.45
LITAF-206ENST00000571277 ZC3H13Q5T200 1668 aaKnown RBP17.84■□□□□ 0.45
LITAF-206ENST00000571277 DUOX2Q9NRD8 1548 aa17.84■□□□□ 0.45
LITAF-206ENST00000571277 PKD2Q13563 968 aa17.84■□□□□ 0.45
LITAF-206ENST00000571277 FGD6Q6ZV73 1430 aa17.83■□□□□ 0.45
LITAF-206ENST00000571277 APLP2Q06481 763 aa17.83■□□□□ 0.44
LITAF-206ENST00000571277 DAPK1P53355 1430 aa17.81■□□□□ 0.44
LITAF-206ENST00000571277 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
LITAF-206ENST00000571277 NLRP1Q9C000 1473 aa17.8■□□□□ 0.44
LITAF-206ENST00000571277 KIF15Q9NS87 1388 aa17.79■□□□□ 0.44
LITAF-206ENST00000571277 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
LITAF-206ENST00000571277 NEURL4Q96JN8 1562 aa17.79■□□□□ 0.44
LITAF-206ENST00000571277 CEP152O94986 1710 aa17.79■□□□□ 0.44
LITAF-206ENST00000571277 POLR1AO95602 1720 aaPredicted RBP17.79■□□□□ 0.44
LITAF-206ENST00000571277 PRDM15P57071 1507 aaPredicted RBP17.78■□□□□ 0.44
LITAF-206ENST00000571277 ZNF335Q9H4Z2 1342 aaPredicted RBP17.78■□□□□ 0.44
LITAF-206ENST00000571277 ERBINQ96RT1 1412 aa17.78■□□□□ 0.44
LITAF-206ENST00000571277 DEPDC5O75140 1603 aa17.76■□□□□ 0.43
LITAF-206ENST00000571277 ERVK-7P63135 1459 aa17.76■□□□□ 0.43
LITAF-206ENST00000571277 UGGT1Q9NYU2 1555 aa17.76■□□□□ 0.43
LITAF-206ENST00000571277 RRP7BPQ9NSQ0 103 aa17.75■□□□□ 0.43
LITAF-206ENST00000571277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.75■□□□□ 0.43
LITAF-206ENST00000571277 THEMISQ8N1K5 641 aaPredicted RBP17.72■□□□□ 0.43
LITAF-206ENST00000571277 CFAP65Q6ZU64 1925 aaKnown RBP17.72■□□□□ 0.43
LITAF-206ENST00000571277 ARHGAP31Q2M1Z3 1444 aa17.72■□□□□ 0.43
LITAF-206ENST00000571277 MED14O60244 1454 aa17.71■□□□□ 0.43
LITAF-206ENST00000571277 ANKRD30AQ9BXX3 1397 aa17.7■□□□□ 0.42
LITAF-206ENST00000571277 VWDEQ8N2E2 1590 aa17.7■□□□□ 0.42
LITAF-206ENST00000571277 ADGRL2O95490 1459 aa17.69■□□□□ 0.42
LITAF-206ENST00000571277 ANKLE2Q86XL3 938 aa17.69■□□□□ 0.42
LITAF-206ENST00000571277 CHIC2Q9UKJ5 165 aa17.69■□□□□ 0.42
LITAF-206ENST00000571277 UBR1Q8IWV7 1749 aa17.69■□□□□ 0.42
LITAF-206ENST00000571277 LMTK2Q8IWU2 1503 aa17.67■□□□□ 0.42
LITAF-206ENST00000571277 NPHP4O75161 1426 aaPredicted RBP17.66■□□□□ 0.42
LITAF-206ENST00000571277 IQGAP1P46940 1657 aa17.65■□□□□ 0.42
LITAF-206ENST00000571277 CPS1P31327 1500 aa17.64■□□□□ 0.41
LITAF-206ENST00000571277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.41
LITAF-206ENST00000571277 FAM50AQ14320 339 aaKnown RBP17.63■□□□□ 0.41
LITAF-206ENST00000571277 KANK1Q14678 1352 aa17.63■□□□□ 0.41
LITAF-206ENST00000571277 ARHGAP23Q9P227 1491 aa17.63■□□□□ 0.41
LITAF-206ENST00000571277 SLIT1O75093 1534 aa17.62■□□□□ 0.41
LITAF-206ENST00000571277 PIK3C2BO00750 1634 aa17.61■□□□□ 0.41
LITAF-206ENST00000571277 EFCAB6Q5THR3 1501 aa17.61■□□□□ 0.41
LITAF-206ENST00000571277 UBAP1LF5GYI3 381 aa17.6■□□□□ 0.41
LITAF-206ENST00000571277 SYNMO15061 1565 aa17.6■□□□□ 0.41
LITAF-206ENST00000571277 STRCP1A6NGW2 1772 aa17.6■□□□□ 0.41
LITAF-206ENST00000571277 KDM5AP29375 1690 aaKnown RBP17.59■□□□□ 0.41
LITAF-206ENST00000571277 SCAF11Q99590 1463 aaKnown RBP17.59■□□□□ 0.41
LITAF-206ENST00000571277 ANKRD50Q9ULJ7 1429 aa17.59■□□□□ 0.41
LITAF-206ENST00000571277 LTKP29376 864 aa17.58■□□□□ 0.4
LITAF-206ENST00000571277 NOS1P29475 1434 aa17.57■□□□□ 0.4
LITAF-206ENST00000571277 TMEM2Q9UHN6 1383 aa17.54■□□□□ 0.4
LITAF-206ENST00000571277 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
LITAF-206ENST00000571277 IDI1Q13907 227 aa17.54■□□□□ 0.4
LITAF-206ENST00000571277 UNC13BO14795 1591 aa17.53■□□□□ 0.4
LITAF-206ENST00000571277 TET3O43151 1660 aa17.53■□□□□ 0.4
LITAF-206ENST00000571277 RPRD2Q5VT52 1461 aaKnown RBP17.53■□□□□ 0.4
LITAF-206ENST00000571277 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
LITAF-206ENST00000571277 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.4
LITAF-206ENST00000571277 TXNDC2Q86VQ3 553 aa17.52■□□□□ 0.4
LITAF-206ENST00000571277 ADGRB3O60242 1522 aa17.51■□□□□ 0.39
LITAF-206ENST00000571277 GCC2Q8IWJ2 1684 aa17.5■□□□□ 0.39
LITAF-206ENST00000571277 DISP3Q9P2K9 1392 aa17.5■□□□□ 0.39
LITAF-206ENST00000571277 EID1Q9Y6B2 187 aa17.49■□□□□ 0.39
LITAF-206ENST00000571277 TOM1O60784 492 aa17.48■□□□□ 0.39
LITAF-206ENST00000571277 XIRP1Q702N8 1843 aaKnown RBP17.47■□□□□ 0.39
LITAF-206ENST00000571277 PPARGC1BQ86YN6 1023 aaKnown RBP17.47■□□□□ 0.39
LITAF-206ENST00000571277 SLC52A1Q9NWF4 448 aa17.47■□□□□ 0.39
LITAF-206ENST00000571277 STAG3Q9UJ98 1225 aa17.47■□□□□ 0.39
LITAF-206ENST00000571277 IQGAP3Q86VI3 1631 aa17.47■□□□□ 0.39
LITAF-206ENST00000571277 E9PCH4 1651 aa17.46■□□□□ 0.39
LITAF-206ENST00000571277 PIP4K2BP78356 416 aa17.46■□□□□ 0.39
LITAF-206ENST00000571277 MYO5BQ9ULV0 1848 aa17.45■□□□□ 0.38
LITAF-206ENST00000571277 ILDR2Q71H61 639 aa17.45■□□□□ 0.38
LITAF-206ENST00000571277 TMEM131LA2VDJ0 1609 aa17.44■□□□□ 0.38
LITAF-206ENST00000571277 HSPA1LP34931 641 aa17.43■□□□□ 0.38
LITAF-206ENST00000571277 ZFYVE9O95405 1425 aa17.43■□□□□ 0.38
LITAF-206ENST00000571277 SCAF1Q9H7N4 1312 aaKnown RBP17.43■□□□□ 0.38
LITAF-206ENST00000571277 ITGAEP38570 1179 aa17.4■□□□□ 0.38
LITAF-206ENST00000571277 RRBP1Q9P2E9 1410 aaKnown RBP17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms