RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 KANK4Q5T7N3 995 aaPredicted RBP19.65■□□□□ 0.74
SCAMP2-212ENST00000569904 MYOM3Q5VTT5 1437 aa19.65■□□□□ 0.74
SCAMP2-212ENST00000569904 EIF2AK4Q9P2K8 1649 aaKnown RBP19.65■□□□□ 0.74
SCAMP2-212ENST00000569904 LTBP4Q8N2S1 1624 aa19.63■□□□□ 0.73
SCAMP2-212ENST00000569904 ZC3H13Q5T200 1668 aaKnown RBP19.62■□□□□ 0.73
SCAMP2-212ENST00000569904 PZPP20742 1482 aa19.62■□□□□ 0.73
SCAMP2-212ENST00000569904 TCOF1Q13428 1488 aaKnown RBP19.62■□□□□ 0.73
SCAMP2-212ENST00000569904 DNMT1P26358 1616 aaKnown RBP19.62■□□□□ 0.73
SCAMP2-212ENST00000569904 TSPY4P0CV99 314 aa19.61■□□□□ 0.73
SCAMP2-212ENST00000569904 TSPY10P0CW01 314 aa19.61■□□□□ 0.73
SCAMP2-212ENST00000569904 CROCC2H7BZ55 1655 aa19.61■□□□□ 0.73
SCAMP2-212ENST00000569904 KIF3BO15066 747 aa19.6■□□□□ 0.73
SCAMP2-212ENST00000569904 A2ML1A8K2U0 1454 aa19.6■□□□□ 0.73
SCAMP2-212ENST00000569904 IQSEC2Q5JU85 1478 aa19.59■□□□□ 0.73
SCAMP2-212ENST00000569904 MROH1Q8NDA8 1641 aa19.58■□□□□ 0.72
SCAMP2-212ENST00000569904 POLR1AO95602 1720 aaPredicted RBP19.56■□□□□ 0.72
SCAMP2-212ENST00000569904 SHANK2Q9UPX8 1470 aa19.56■□□□□ 0.72
SCAMP2-212ENST00000569904 PTPN23Q9H3S7 1636 aa19.56■□□□□ 0.72
SCAMP2-212ENST00000569904 PKD2Q13563 968 aa19.56■□□□□ 0.72
SCAMP2-212ENST00000569904 ABCC3O15438 1527 aa19.54■□□□□ 0.72
SCAMP2-212ENST00000569904 DUOX2Q9NRD8 1548 aa19.54■□□□□ 0.72
SCAMP2-212ENST00000569904 TNRQ92752 1358 aa19.53■□□□□ 0.72
SCAMP2-212ENST00000569904 WASHC2CQ9Y4E1 1318 aa19.52■□□□□ 0.72
SCAMP2-212ENST00000569904 NLRP1Q9C000 1473 aa19.52■□□□□ 0.72
SCAMP2-212ENST00000569904 SPATA31D1Q6ZQQ2 1576 aa19.52■□□□□ 0.71
SCAMP2-212ENST00000569904 NCKAP5LQ9HCH0 1330 aa19.51■□□□□ 0.71
SCAMP2-212ENST00000569904 NEURL4Q96JN8 1562 aa19.5■□□□□ 0.71
SCAMP2-212ENST00000569904 CEP152O94986 1710 aa19.5■□□□□ 0.71
SCAMP2-212ENST00000569904 PRDM15P57071 1507 aaPredicted RBP19.5■□□□□ 0.71
SCAMP2-212ENST00000569904 ABCC5O15440 1437 aa19.5■□□□□ 0.71
SCAMP2-212ENST00000569904 FBXO31Q5XUX0 539 aaPredicted RBP19.49■□□□□ 0.71
SCAMP2-212ENST00000569904 DEPDC5O75140 1603 aa19.49■□□□□ 0.71
SCAMP2-212ENST00000569904 FGD6Q6ZV73 1430 aa19.49■□□□□ 0.71
SCAMP2-212ENST00000569904 ERBINQ96RT1 1412 aa19.48■□□□□ 0.71
SCAMP2-212ENST00000569904 DAPK1P53355 1430 aa19.47■□□□□ 0.71
SCAMP2-212ENST00000569904 APLP2Q06481 763 aa19.46■□□□□ 0.71
SCAMP2-212ENST00000569904 UGGT1Q9NYU2 1555 aa19.45■□□□□ 0.7
SCAMP2-212ENST00000569904 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
SCAMP2-212ENST00000569904 ERVK-7P63135 1459 aa19.44■□□□□ 0.7
SCAMP2-212ENST00000569904 MED14O60244 1454 aa19.43■□□□□ 0.7
SCAMP2-212ENST00000569904 ZNF335Q9H4Z2 1342 aaPredicted RBP19.43■□□□□ 0.7
SCAMP2-212ENST00000569904 ARHGAP31Q2M1Z3 1444 aa19.42■□□□□ 0.7
SCAMP2-212ENST00000569904 UBR1Q8IWV7 1749 aa19.41■□□□□ 0.7
SCAMP2-212ENST00000569904 THEMISQ8N1K5 641 aaPredicted RBP19.4■□□□□ 0.7
SCAMP2-212ENST00000569904 VWDEQ8N2E2 1590 aa19.4■□□□□ 0.7
SCAMP2-212ENST00000569904 CFAP65Q6ZU64 1925 aaKnown RBP19.39■□□□□ 0.7
SCAMP2-212ENST00000569904 ADGRL2O95490 1459 aa19.39■□□□□ 0.69
SCAMP2-212ENST00000569904 LMTK2Q8IWU2 1503 aa19.38■□□□□ 0.69
SCAMP2-212ENST00000569904 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.38■□□□□ 0.69
SCAMP2-212ENST00000569904 IQGAP1P46940 1657 aa19.37■□□□□ 0.69
SCAMP2-212ENST00000569904 CPS1P31327 1500 aa19.37■□□□□ 0.69
SCAMP2-212ENST00000569904 KDM5AP29375 1690 aaKnown RBP19.36■□□□□ 0.69
SCAMP2-212ENST00000569904 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
SCAMP2-212ENST00000569904 ANKLE2Q86XL3 938 aa19.35■□□□□ 0.69
SCAMP2-212ENST00000569904 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
SCAMP2-212ENST00000569904 NPHP4O75161 1426 aaPredicted RBP19.33■□□□□ 0.68
SCAMP2-212ENST00000569904 SLIT1O75093 1534 aa19.32■□□□□ 0.68
SCAMP2-212ENST00000569904 ARHGAP23Q9P227 1491 aa19.32■□□□□ 0.68
SCAMP2-212ENST00000569904 STRCP1A6NGW2 1772 aa19.29■□□□□ 0.68
SCAMP2-212ENST00000569904 PIK3C2BO00750 1634 aa19.29■□□□□ 0.68
SCAMP2-212ENST00000569904 EFCAB6Q5THR3 1501 aa19.29■□□□□ 0.68
SCAMP2-212ENST00000569904 KANK1Q14678 1352 aa19.29■□□□□ 0.68
SCAMP2-212ENST00000569904 SYNMO15061 1565 aa19.27■□□□□ 0.67
SCAMP2-212ENST00000569904 SCAF11Q99590 1463 aaKnown RBP19.26■□□□□ 0.67
SCAMP2-212ENST00000569904 CHIC2Q9UKJ5 165 aa19.25■□□□□ 0.67
SCAMP2-212ENST00000569904 UBAP1LF5GYI3 381 aa19.24■□□□□ 0.67
SCAMP2-212ENST00000569904 NOS1P29475 1434 aa19.24■□□□□ 0.67
SCAMP2-212ENST00000569904 UNC13BO14795 1591 aa19.23■□□□□ 0.67
SCAMP2-212ENST00000569904 RPRD2Q5VT52 1461 aaKnown RBP19.22■□□□□ 0.67
SCAMP2-212ENST00000569904 ALKQ9UM73 1620 aa19.22■□□□□ 0.67
SCAMP2-212ENST00000569904 TET3O43151 1660 aa19.22■□□□□ 0.67
SCAMP2-212ENST00000569904 ANKRD50Q9ULJ7 1429 aa19.22■□□□□ 0.67
SCAMP2-212ENST00000569904 GCC2Q8IWJ2 1684 aa19.21■□□□□ 0.67
SCAMP2-212ENST00000569904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.21■□□□□ 0.67
SCAMP2-212ENST00000569904 FAM50AQ14320 339 aaKnown RBP19.19■□□□□ 0.66
SCAMP2-212ENST00000569904 ADGRB3O60242 1522 aa19.19■□□□□ 0.66
SCAMP2-212ENST00000569904 LRRC7Q96NW7 1537 aa19.19■□□□□ 0.66
SCAMP2-212ENST00000569904 ROCK1Q13464 1354 aa19.19■□□□□ 0.66
SCAMP2-212ENST00000569904 TMEM2Q9UHN6 1383 aa19.19■□□□□ 0.66
SCAMP2-212ENST00000569904 LTKP29376 864 aa19.18■□□□□ 0.66
SCAMP2-212ENST00000569904 XIRP1Q702N8 1843 aaKnown RBP19.17■□□□□ 0.66
SCAMP2-212ENST00000569904 IDI1Q13907 227 aa19.16■□□□□ 0.66
SCAMP2-212ENST00000569904 TOM1O60784 492 aa19.15■□□□□ 0.66
SCAMP2-212ENST00000569904 DISP3Q9P2K9 1392 aa19.15■□□□□ 0.66
SCAMP2-212ENST00000569904 IQGAP3Q86VI3 1631 aa19.14■□□□□ 0.66
SCAMP2-212ENST00000569904 TXNDC2Q86VQ3 553 aa19.14■□□□□ 0.65
SCAMP2-212ENST00000569904 MYO5BQ9ULV0 1848 aa19.14■□□□□ 0.65
SCAMP2-212ENST00000569904 SLC52A1Q9NWF4 448 aa19.13■□□□□ 0.65
SCAMP2-212ENST00000569904 EID1Q9Y6B2 187 aa19.13■□□□□ 0.65
SCAMP2-212ENST00000569904 E9PCH4 1651 aa19.13■□□□□ 0.65
SCAMP2-212ENST00000569904 TMEM131LA2VDJ0 1609 aa19.11■□□□□ 0.65
SCAMP2-212ENST00000569904 NWD1Q149M9 1564 aa19.08■□□□□ 0.65
SCAMP2-212ENST00000569904 ZFYVE9O95405 1425 aa19.08■□□□□ 0.64
SCAMP2-212ENST00000569904 STAG3Q9UJ98 1225 aa19.07■□□□□ 0.64
SCAMP2-212ENST00000569904 HSPA1LP34931 641 aa19.05■□□□□ 0.64
SCAMP2-212ENST00000569904 ILDR2Q71H61 639 aa19.05■□□□□ 0.64
SCAMP2-212ENST00000569904 PIP4K2BP78356 416 aa19.04■□□□□ 0.64
SCAMP2-212ENST00000569904 CHD2O14647 1828 aaKnown RBP19.03■□□□□ 0.64
SCAMP2-212ENST00000569904 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.64
SCAMP2-212ENST00000569904 NKTRP30414 1462 aaKnown RBP19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms