RNA–Protein interactions for RNA: ENST00000567165.5

LYRM1-207, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-207ENST00000567165 MAP3K1Q13233 1512 aa17.25■□□□□ 0.35
LYRM1-207ENST00000567165 DHX29Q7Z478 1369 aaKnown RBP17.24■□□□□ 0.35
LYRM1-207ENST00000567165 MYO3AQ8NEV4 1616 aa17.23■□□□□ 0.35
LYRM1-207ENST00000567165 PTPRKQ15262 1439 aa17.21■□□□□ 0.35
LYRM1-207ENST00000567165 NCOA1Q15788 1441 aa17.21■□□□□ 0.35
LYRM1-207ENST00000567165 CERKQ8TCT0 537 aa17.21■□□□□ 0.35
LYRM1-207ENST00000567165 RSPH4AQ5TD94 716 aa17.2■□□□□ 0.34
LYRM1-207ENST00000567165 CAMSAP1Q5T5Y3 1602 aa17.2■□□□□ 0.34
LYRM1-207ENST00000567165 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
LYRM1-207ENST00000567165 KIF3BO15066 747 aa17.19■□□□□ 0.34
LYRM1-207ENST00000567165 MYOM3Q5VTT5 1437 aa17.19■□□□□ 0.34
LYRM1-207ENST00000567165 PTPRTO14522 1441 aa17.18■□□□□ 0.34
LYRM1-207ENST00000567165 CEP170BQ9Y4F5 1589 aaPredicted RBP17.18■□□□□ 0.34
LYRM1-207ENST00000567165 KDM5DQ9BY66 1539 aa17.17■□□□□ 0.34
LYRM1-207ENST00000567165 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
LYRM1-207ENST00000567165 TSPY4P0CV99 314 aa17.16■□□□□ 0.34
LYRM1-207ENST00000567165 TSPY10P0CW01 314 aa17.16■□□□□ 0.34
LYRM1-207ENST00000567165 MIA2Q96PC5 1412 aa17.15■□□□□ 0.34
LYRM1-207ENST00000567165 FAM135AQ9P2D6 1515 aa17.13■□□□□ 0.33
LYRM1-207ENST00000567165 NCKAP5LQ9HCH0 1330 aa17.13■□□□□ 0.33
LYRM1-207ENST00000567165 RNF17Q9BXT8 1623 aaKnown RBP17.12■□□□□ 0.33
LYRM1-207ENST00000567165 PZPP20742 1482 aa17.12■□□□□ 0.33
LYRM1-207ENST00000567165 FBXO31Q5XUX0 539 aaPredicted RBP17.11■□□□□ 0.33
LYRM1-207ENST00000567165 WASHC2CQ9Y4E1 1318 aa17.11■□□□□ 0.33
LYRM1-207ENST00000567165 PTPN23Q9H3S7 1636 aa17.1■□□□□ 0.33
LYRM1-207ENST00000567165 APLP2Q06481 763 aa17.1■□□□□ 0.33
LYRM1-207ENST00000567165 A2ML1A8K2U0 1454 aa17.1■□□□□ 0.33
LYRM1-207ENST00000567165 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
LYRM1-207ENST00000567165 DNMT1P26358 1616 aaKnown RBP17.1■□□□□ 0.33
LYRM1-207ENST00000567165 LTBP4Q8N2S1 1624 aa17.1■□□□□ 0.33
LYRM1-207ENST00000567165 CROCC2H7BZ55 1655 aa17.1■□□□□ 0.33
LYRM1-207ENST00000567165 TNRQ92752 1358 aa17.09■□□□□ 0.33
LYRM1-207ENST00000567165 TCOF1Q13428 1488 aaKnown RBP17.09■□□□□ 0.33
LYRM1-207ENST00000567165 EIF2AK4Q9P2K8 1649 aaKnown RBP17.09■□□□□ 0.33
LYRM1-207ENST00000567165 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
LYRM1-207ENST00000567165 ABCC3O15438 1527 aa17.07■□□□□ 0.32
LYRM1-207ENST00000567165 ABCC5O15440 1437 aa17.06■□□□□ 0.32
LYRM1-207ENST00000567165 ZC3H13Q5T200 1668 aaKnown RBP17.06■□□□□ 0.32
LYRM1-207ENST00000567165 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
LYRM1-207ENST00000567165 SHANK2Q9UPX8 1470 aa17.05■□□□□ 0.32
LYRM1-207ENST00000567165 FGD6Q6ZV73 1430 aa17.05■□□□□ 0.32
LYRM1-207ENST00000567165 PKD2Q13563 968 aa17.05■□□□□ 0.32
LYRM1-207ENST00000567165 CEP152O94986 1710 aa17.04■□□□□ 0.32
LYRM1-207ENST00000567165 DAPK1P53355 1430 aa17.04■□□□□ 0.32
LYRM1-207ENST00000567165 KIF15Q9NS87 1388 aa17.03■□□□□ 0.32
LYRM1-207ENST00000567165 ZNF335Q9H4Z2 1342 aaPredicted RBP17.03■□□□□ 0.32
LYRM1-207ENST00000567165 POLR1AO95602 1720 aaPredicted RBP17.02■□□□□ 0.32
LYRM1-207ENST00000567165 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
LYRM1-207ENST00000567165 NEURL4Q96JN8 1562 aa17.01■□□□□ 0.31
LYRM1-207ENST00000567165 NLRP1Q9C000 1473 aa17■□□□□ 0.31
LYRM1-207ENST00000567165 DCAF8L1A6NGE4 600 aa17■□□□□ 0.31
LYRM1-207ENST00000567165 SPATA31D1Q6ZQQ2 1576 aa17■□□□□ 0.31
LYRM1-207ENST00000567165 ERVK-7P63135 1459 aa16.99■□□□□ 0.31
LYRM1-207ENST00000567165 ERBINQ96RT1 1412 aa16.99■□□□□ 0.31
LYRM1-207ENST00000567165 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
LYRM1-207ENST00000567165 IQSEC2Q5JU85 1478 aa16.99■□□□□ 0.31
LYRM1-207ENST00000567165 UGGT1Q9NYU2 1555 aa16.98■□□□□ 0.31
LYRM1-207ENST00000567165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.98■□□□□ 0.31
LYRM1-207ENST00000567165 DEPDC5O75140 1603 aa16.96■□□□□ 0.31
LYRM1-207ENST00000567165 CHIC2Q9UKJ5 165 aa16.96■□□□□ 0.31
LYRM1-207ENST00000567165 CFAP65Q6ZU64 1925 aaKnown RBP16.95■□□□□ 0.3
LYRM1-207ENST00000567165 THEMISQ8N1K5 641 aaPredicted RBP16.94■□□□□ 0.3
LYRM1-207ENST00000567165 ANKRD30AQ9BXX3 1397 aa16.93■□□□□ 0.3
LYRM1-207ENST00000567165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.93■□□□□ 0.3
LYRM1-207ENST00000567165 ANKLE2Q86XL3 938 aa16.92■□□□□ 0.3
LYRM1-207ENST00000567165 UBR1Q8IWV7 1749 aa16.91■□□□□ 0.3
LYRM1-207ENST00000567165 FAM50AQ14320 339 aaKnown RBP16.91■□□□□ 0.3
LYRM1-207ENST00000567165 NPHP4O75161 1426 aaPredicted RBP16.9■□□□□ 0.3
LYRM1-207ENST00000567165 ARHGAP31Q2M1Z3 1444 aa16.9■□□□□ 0.3
LYRM1-207ENST00000567165 MED14O60244 1454 aa16.9■□□□□ 0.3
LYRM1-207ENST00000567165 ADGRL2O95490 1459 aa16.9■□□□□ 0.3
LYRM1-207ENST00000567165 IQGAP1P46940 1657 aa16.9■□□□□ 0.3
LYRM1-207ENST00000567165 VWDEQ8N2E2 1590 aa16.89■□□□□ 0.3
LYRM1-207ENST00000567165 KANK1Q14678 1352 aa16.88■□□□□ 0.29
LYRM1-207ENST00000567165 LMTK2Q8IWU2 1503 aa16.87■□□□□ 0.29
LYRM1-207ENST00000567165 UBAP1LF5GYI3 381 aa16.87■□□□□ 0.29
LYRM1-207ENST00000567165 CPS1P31327 1500 aa16.86■□□□□ 0.29
LYRM1-207ENST00000567165 PIK3C2BO00750 1634 aa16.85■□□□□ 0.29
LYRM1-207ENST00000567165 EFCAB6Q5THR3 1501 aa16.84■□□□□ 0.29
LYRM1-207ENST00000567165 SYNMO15061 1565 aa16.83■□□□□ 0.28
LYRM1-207ENST00000567165 SCAF11Q99590 1463 aaKnown RBP16.83■□□□□ 0.28
LYRM1-207ENST00000567165 STRCP1A6NGW2 1772 aa16.82■□□□□ 0.28
LYRM1-207ENST00000567165 SLIT1O75093 1534 aa16.82■□□□□ 0.28
LYRM1-207ENST00000567165 ARHGAP23Q9P227 1491 aa16.82■□□□□ 0.28
LYRM1-207ENST00000567165 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
LYRM1-207ENST00000567165 LTKP29376 864 aa16.8■□□□□ 0.28
LYRM1-207ENST00000567165 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
LYRM1-207ENST00000567165 NOS1P29475 1434 aa16.79■□□□□ 0.28
LYRM1-207ENST00000567165 DISP3Q9P2K9 1392 aa16.78■□□□□ 0.28
LYRM1-207ENST00000567165 TXNDC2Q86VQ3 553 aa16.78■□□□□ 0.28
LYRM1-207ENST00000567165 IDI1Q13907 227 aa16.77■□□□□ 0.28
LYRM1-207ENST00000567165 KDM5AP29375 1690 aaKnown RBP16.77■□□□□ 0.28
LYRM1-207ENST00000567165 UNC13BO14795 1591 aa16.77■□□□□ 0.27
LYRM1-207ENST00000567165 TMEM2Q9UHN6 1383 aa16.77■□□□□ 0.27
LYRM1-207ENST00000567165 PIP4K2BP78356 416 aa16.76■□□□□ 0.27
LYRM1-207ENST00000567165 STAG3Q9UJ98 1225 aa16.76■□□□□ 0.27
LYRM1-207ENST00000567165 ALKQ9UM73 1620 aa16.76■□□□□ 0.27
LYRM1-207ENST00000567165 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
LYRM1-207ENST00000567165 LRRC7Q96NW7 1537 aa16.75■□□□□ 0.27
LYRM1-207ENST00000567165 TET3O43151 1660 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms