RNA–Protein interactions for RNA: ENST00000567165.5

LYRM1-207, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-207ENST00000567165 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
LYRM1-207ENST00000567165 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
LYRM1-207ENST00000567165 CHIC1Q5VXU3 224 aa25.43■■□□□ 1.66
LYRM1-207ENST00000567165 CCDC180Q9P1Z9 1646 aa24.33■■□□□ 1.49
LYRM1-207ENST00000567165 ABCC9O60706 1549 aa24.24■■□□□ 1.47
LYRM1-207ENST00000567165 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
LYRM1-207ENST00000567165 NACADO15069 1562 aa22.96■■□□□ 1.27
LYRM1-207ENST00000567165 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
LYRM1-207ENST00000567165 MYO15BQ96JP2 1530 aa22.66■■□□□ 1.22
LYRM1-207ENST00000567165 UNC13AQ9UPW8 1703 aa22.62■■□□□ 1.21
LYRM1-207ENST00000567165 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
LYRM1-207ENST00000567165 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
LYRM1-207ENST00000567165 ZCCHC6Q5VYS8 1495 aaKnown RBP22.56■■□□□ 1.2
LYRM1-207ENST00000567165 BICRAQ9NZM4 1560 aa22.45■■□□□ 1.18
LYRM1-207ENST00000567165 DCAF1Q9Y4B6 1507 aa22.42■■□□□ 1.18
LYRM1-207ENST00000567165 PHF23Q9BUL5 403 aaPredicted RBP22.38■■□□□ 1.17
LYRM1-207ENST00000567165 SCRIBQ14160 1630 aa22.23■■□□□ 1.15
LYRM1-207ENST00000567165 SENP3Q9H4L4 574 aaPredicted RBP22.21■■□□□ 1.15
LYRM1-207ENST00000567165 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
LYRM1-207ENST00000567165 CC2D2AQ9P2K1 1620 aa21.9■■□□□ 1.1
LYRM1-207ENST00000567165 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
LYRM1-207ENST00000567165 CECR2Q9BXF3 1484 aa21.8■■□□□ 1.08
LYRM1-207ENST00000567165 SMARCA4P51532 1647 aa21.18■□□□□ 0.98
LYRM1-207ENST00000567165 NCAPD3P42695 1498 aa21.18■□□□□ 0.98
LYRM1-207ENST00000567165 ATAD2BQ9ULI0 1458 aa21.16■□□□□ 0.98
LYRM1-207ENST00000567165 SMARCA2P51531 1590 aa21.1■□□□□ 0.97
LYRM1-207ENST00000567165 BAZ1AQ9NRL2 1556 aaPredicted RBP21.07■□□□□ 0.96
LYRM1-207ENST00000567165 HMGXB3Q12766 1538 aa21.05■□□□□ 0.96
LYRM1-207ENST00000567165 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
LYRM1-207ENST00000567165 BAZ1BQ9UIG0 1483 aaKnown RBP20.96■□□□□ 0.95
LYRM1-207ENST00000567165 PEG3Q9GZU2 1588 aa20.96■□□□□ 0.95
LYRM1-207ENST00000567165 ERCC6Q03468 1493 aa20.9■□□□□ 0.94
LYRM1-207ENST00000567165 NESP48681 1621 aa20.87■□□□□ 0.93
LYRM1-207ENST00000567165 CUX2O14529 1486 aa20.8■□□□□ 0.92
LYRM1-207ENST00000567165 WIZO95785 1651 aa20.73■□□□□ 0.91
LYRM1-207ENST00000567165 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
LYRM1-207ENST00000567165 FOXD1Q16676 465 aa20.66■□□□□ 0.9
LYRM1-207ENST00000567165 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
LYRM1-207ENST00000567165 DNAJC5Q9H3Z4 198 aa20.62■□□□□ 0.89
LYRM1-207ENST00000567165 KIF21AQ7Z4S6 1674 aa20.61■□□□□ 0.89
LYRM1-207ENST00000567165 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
LYRM1-207ENST00000567165 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
LYRM1-207ENST00000567165 RSF1Q96T23 1441 aaPredicted RBP20.55■□□□□ 0.88
LYRM1-207ENST00000567165 CADPSQ9ULU8 1353 aa20.54■□□□□ 0.88
LYRM1-207ENST00000567165 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
LYRM1-207ENST00000567165 MRC2Q9UBG0 1479 aa20.41■□□□□ 0.86
LYRM1-207ENST00000567165 WDR62O43379 1518 aa20.36■□□□□ 0.85
LYRM1-207ENST00000567165 CFTRP13569 1480 aa20.35■□□□□ 0.85
LYRM1-207ENST00000567165 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
LYRM1-207ENST00000567165 FANCD2Q9BXW9 1451 aa20.34■□□□□ 0.85
LYRM1-207ENST00000567165 CCDC88BA6NC98 1476 aa20.22■□□□□ 0.83
LYRM1-207ENST00000567165 PRDM2Q13029 1718 aa20.19■□□□□ 0.82
LYRM1-207ENST00000567165 URB2Q14146 1524 aaKnown RBP20.18■□□□□ 0.82
LYRM1-207ENST00000567165 TOPBP1Q92547 1522 aa19.97■□□□□ 0.79
LYRM1-207ENST00000567165 IFT140Q96RY7 1462 aa19.92■□□□□ 0.78
LYRM1-207ENST00000567165 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
LYRM1-207ENST00000567165 DNMBPQ6XZF7 1577 aa19.91■□□□□ 0.78
LYRM1-207ENST00000567165 ABCC8Q09428 1581 aa19.88■□□□□ 0.77
LYRM1-207ENST00000567165 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
LYRM1-207ENST00000567165 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.76
LYRM1-207ENST00000567165 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
LYRM1-207ENST00000567165 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
LYRM1-207ENST00000567165 TARBP1Q13395 1621 aaKnown RBP19.8■□□□□ 0.76
LYRM1-207ENST00000567165 ADRA2BP18089 450 aa19.79■□□□□ 0.76
LYRM1-207ENST00000567165 POLA1P09884 1462 aaPredicted RBP19.78■□□□□ 0.76
LYRM1-207ENST00000567165 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
LYRM1-207ENST00000567165 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.75
LYRM1-207ENST00000567165 RAD54L2Q9Y4B4 1467 aa19.72■□□□□ 0.75
LYRM1-207ENST00000567165 CUX1P39880 1505 aa19.69■□□□□ 0.74
LYRM1-207ENST00000567165 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
LYRM1-207ENST00000567165 SOGA1O94964 1423 aa19.67■□□□□ 0.74
LYRM1-207ENST00000567165 CHD1O14646 1710 aa19.65■□□□□ 0.74
LYRM1-207ENST00000567165 RIMBP3CA6NJZ7 1639 aa19.65■□□□□ 0.74
LYRM1-207ENST00000567165 RIMBP3BA6NNM3 1639 aa19.65■□□□□ 0.74
LYRM1-207ENST00000567165 RIMBP3Q9UFD9 1639 aa19.65■□□□□ 0.74
LYRM1-207ENST00000567165 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
LYRM1-207ENST00000567165 ARHGEF11O15085 1522 aa19.58■□□□□ 0.73
LYRM1-207ENST00000567165 WDR97A6NE52 1622 aa19.57■□□□□ 0.72
LYRM1-207ENST00000567165 FBLN2P98095 1184 aa19.56■□□□□ 0.72
LYRM1-207ENST00000567165 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
LYRM1-207ENST00000567165 GRIN2BQ13224 1484 aa19.48■□□□□ 0.71
LYRM1-207ENST00000567165 MAGI1Q96QZ7 1491 aaPredicted RBP19.48■□□□□ 0.71
LYRM1-207ENST00000567165 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
LYRM1-207ENST00000567165 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
LYRM1-207ENST00000567165 ABCA10Q8WWZ4 1543 aa19.45■□□□□ 0.7
LYRM1-207ENST00000567165 GAPVD1Q14C86 1478 aa19.44■□□□□ 0.7
LYRM1-207ENST00000567165 ABCA5Q8WWZ7 1642 aa19.43■□□□□ 0.7
LYRM1-207ENST00000567165 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
LYRM1-207ENST00000567165 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
LYRM1-207ENST00000567165 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
LYRM1-207ENST00000567165 ARAP1Q96P48 1450 aa19.41■□□□□ 0.7
LYRM1-207ENST00000567165 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
LYRM1-207ENST00000567165 BIVM-ERCC5R4GMW8 1640 aa19.4■□□□□ 0.7
LYRM1-207ENST00000567165 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
LYRM1-207ENST00000567165 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
LYRM1-207ENST00000567165 WRNQ14191 1432 aaPredicted RBP eCLIP19.38■□□□□ 0.69
LYRM1-207ENST00000567165 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
LYRM1-207ENST00000567165 GRIN2AQ12879 1464 aa19.25■□□□□ 0.67
LYRM1-207ENST00000567165 CEP170Q5SW79 1584 aa19.21■□□□□ 0.67
LYRM1-207ENST00000567165 ERICH3Q5RHP9 1530 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms