RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 KANK4Q5T7N3 995 aaPredicted RBP29.95■■■□□ 2.39
ABCA3-204ENST00000566200 FAM135AQ9P2D6 1515 aa29.95■■■□□ 2.38
ABCA3-204ENST00000566200 DNMT1P26358 1616 aaKnown RBP29.94■■■□□ 2.38
ABCA3-204ENST00000566200 A2ML1A8K2U0 1454 aa29.93■■■□□ 2.38
ABCA3-204ENST00000566200 MAST1Q9Y2H9 1570 aa29.92■■■□□ 2.38
ABCA3-204ENST00000566200 PZPP20742 1482 aa29.91■■■□□ 2.38
ABCA3-204ENST00000566200 IQSEC2Q5JU85 1478 aa29.91■■■□□ 2.38
ABCA3-204ENST00000566200 PKD2Q13563 968 aa29.9■■■□□ 2.38
ABCA3-204ENST00000566200 FBXO31Q5XUX0 539 aaPredicted RBP29.9■■■□□ 2.38
ABCA3-204ENST00000566200 ZNF335Q9H4Z2 1342 aaPredicted RBP29.88■■■□□ 2.37
ABCA3-204ENST00000566200 TSPY4P0CV99 314 aa29.87■■■□□ 2.37
ABCA3-204ENST00000566200 TSPY10P0CW01 314 aa29.87■■■□□ 2.37
ABCA3-204ENST00000566200 TNRQ92752 1358 aa29.87■■■□□ 2.37
ABCA3-204ENST00000566200 RNF17Q9BXT8 1623 aaKnown RBP29.86■■■□□ 2.37
ABCA3-204ENST00000566200 MYOM3Q5VTT5 1437 aa29.85■■■□□ 2.37
ABCA3-204ENST00000566200 WASHC2CQ9Y4E1 1318 aa29.84■■■□□ 2.37
ABCA3-204ENST00000566200 MIA2Q96PC5 1412 aa29.84■■■□□ 2.37
ABCA3-204ENST00000566200 POLR1AO95602 1720 aaPredicted RBP29.82■■■□□ 2.36
ABCA3-204ENST00000566200 NEURL4Q96JN8 1562 aa29.81■■■□□ 2.36
ABCA3-204ENST00000566200 MROH1Q8NDA8 1641 aa29.8■■■□□ 2.36
ABCA3-204ENST00000566200 EIF2AK4Q9P2K8 1649 aaKnown RBP29.8■■■□□ 2.36
ABCA3-204ENST00000566200 ABCC3O15438 1527 aa29.78■■■□□ 2.36
ABCA3-204ENST00000566200 ZC3H13Q5T200 1668 aaKnown RBP29.78■■■□□ 2.36
ABCA3-204ENST00000566200 NLRP1Q9C000 1473 aa29.74■■■□□ 2.35
ABCA3-204ENST00000566200 CROCC2H7BZ55 1655 aa29.72■■■□□ 2.35
ABCA3-204ENST00000566200 SPATA31D1Q6ZQQ2 1576 aa29.72■■■□□ 2.35
ABCA3-204ENST00000566200 CEP152O94986 1710 aa29.71■■■□□ 2.35
ABCA3-204ENST00000566200 UGGT1Q9NYU2 1555 aa29.71■■■□□ 2.35
ABCA3-204ENST00000566200 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.7■■■□□ 2.35
ABCA3-204ENST00000566200 DUOX2Q9NRD8 1548 aa29.7■■■□□ 2.34
ABCA3-204ENST00000566200 PTPN23Q9H3S7 1636 aa29.69■■■□□ 2.34
ABCA3-204ENST00000566200 ABCC5O15440 1437 aa29.67■■■□□ 2.34
ABCA3-204ENST00000566200 ERVK-7P63135 1459 aa29.67■■■□□ 2.34
ABCA3-204ENST00000566200 DEPDC5O75140 1603 aa29.66■■■□□ 2.34
ABCA3-204ENST00000566200 SHANK2Q9UPX8 1470 aa29.66■■■□□ 2.34
ABCA3-204ENST00000566200 THEMISQ8N1K5 641 aaPredicted RBP29.64■■■□□ 2.34
ABCA3-204ENST00000566200 DISP3Q9P2K9 1392 aa29.64■■■□□ 2.33
ABCA3-204ENST00000566200 MED14O60244 1454 aa29.63■■■□□ 2.33
ABCA3-204ENST00000566200 UBAP1LF5GYI3 381 aa29.63■■■□□ 2.33
ABCA3-204ENST00000566200 VWDEQ8N2E2 1590 aa29.62■■■□□ 2.33
ABCA3-204ENST00000566200 ANKLE2Q86XL3 938 aa29.62■■■□□ 2.33
ABCA3-204ENST00000566200 KIF15Q9NS87 1388 aa29.62■■■□□ 2.33
ABCA3-204ENST00000566200 PRDM15P57071 1507 aaPredicted RBP29.61■■■□□ 2.33
ABCA3-204ENST00000566200 CFAP65Q6ZU64 1925 aaKnown RBP29.6■■■□□ 2.33
ABCA3-204ENST00000566200 DAPK1P53355 1430 aa29.6■■■□□ 2.33
ABCA3-204ENST00000566200 CPS1P31327 1500 aa29.6■■■□□ 2.33
ABCA3-204ENST00000566200 NPHP4O75161 1426 aaPredicted RBP29.59■■■□□ 2.33
ABCA3-204ENST00000566200 FGD6Q6ZV73 1430 aa29.59■■■□□ 2.33
ABCA3-204ENST00000566200 ERBINQ96RT1 1412 aa29.58■■■□□ 2.33
ABCA3-204ENST00000566200 UBR1Q8IWV7 1749 aa29.57■■■□□ 2.32
ABCA3-204ENST00000566200 IQGAP1P46940 1657 aa29.57■■■□□ 2.32
ABCA3-204ENST00000566200 ILDR2Q71H61 639 aa29.57■■■□□ 2.32
ABCA3-204ENST00000566200 RRP7BPQ9NSQ0 103 aa29.56■■■□□ 2.32
ABCA3-204ENST00000566200 APLP2Q06481 763 aa29.55■■■□□ 2.32
ABCA3-204ENST00000566200 ARHGAP31Q2M1Z3 1444 aa29.53■■■□□ 2.32
ABCA3-204ENST00000566200 STRCP1A6NGW2 1772 aa29.52■■■□□ 2.32
ABCA3-204ENST00000566200 ALKQ9UM73 1620 aa29.45■■■□□ 2.31
ABCA3-204ENST00000566200 ARHGAP23Q9P227 1491 aa29.44■■■□□ 2.3
ABCA3-204ENST00000566200 PIK3C2BO00750 1634 aa29.43■■■□□ 2.3
ABCA3-204ENST00000566200 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.43■■■□□ 2.3
ABCA3-204ENST00000566200 CHIC2Q9UKJ5 165 aa29.43■■■□□ 2.3
ABCA3-204ENST00000566200 SLIT1O75093 1534 aa29.43■■■□□ 2.3
ABCA3-204ENST00000566200 ANKRD30AQ9BXX3 1397 aa29.42■■■□□ 2.3
ABCA3-204ENST00000566200 LMTK2Q8IWU2 1503 aa29.42■■■□□ 2.3
ABCA3-204ENST00000566200 SCAF11Q99590 1463 aaKnown RBP29.42■■■□□ 2.3
ABCA3-204ENST00000566200 PIP4K2BP78356 416 aa29.39■■■□□ 2.3
ABCA3-204ENST00000566200 ADGRL2O95490 1459 aa29.39■■■□□ 2.3
ABCA3-204ENST00000566200 LRRC7Q96NW7 1537 aa29.39■■■□□ 2.3
ABCA3-204ENST00000566200 TOM1O60784 492 aa29.38■■■□□ 2.29
ABCA3-204ENST00000566200 LTKP29376 864 aa29.38■■■□□ 2.29
ABCA3-204ENST00000566200 SYNMO15061 1565 aa29.37■■■□□ 2.29
ABCA3-204ENST00000566200 KANK1Q14678 1352 aa29.37■■■□□ 2.29
ABCA3-204ENST00000566200 HSPA1LP34931 641 aa29.36■■■□□ 2.29
ABCA3-204ENST00000566200 SCAF1Q9H7N4 1312 aaKnown RBP29.36■■■□□ 2.29
ABCA3-204ENST00000566200 KDM5AP29375 1690 aaKnown RBP29.34■■■□□ 2.29
ABCA3-204ENST00000566200 EFCAB6Q5THR3 1501 aa29.33■■■□□ 2.29
ABCA3-204ENST00000566200 SOCS7O14512 581 aa29.32■■■□□ 2.28
ABCA3-204ENST00000566200 TXNDC2Q86VQ3 553 aa29.32■■■□□ 2.28
ABCA3-204ENST00000566200 NOS1P29475 1434 aa29.29■■■□□ 2.28
ABCA3-204ENST00000566200 TMEM2Q9UHN6 1383 aa29.29■■■□□ 2.28
ABCA3-204ENST00000566200 XIRP1Q702N8 1843 aaKnown RBP29.27■■■□□ 2.28
ABCA3-204ENST00000566200 IDI1Q13907 227 aa29.27■■■□□ 2.28
ABCA3-204ENST00000566200 FAM50AQ14320 339 aaKnown RBP29.27■■■□□ 2.28
ABCA3-204ENST00000566200 MED1Q15648 1581 aaPredicted RBP29.25■■■□□ 2.27
ABCA3-204ENST00000566200 ANKRD50Q9ULJ7 1429 aa29.24■■■□□ 2.27
ABCA3-204ENST00000566200 EID1Q9Y6B2 187 aa29.23■■■□□ 2.27
ABCA3-204ENST00000566200 ADGRB3O60242 1522 aa29.22■■■□□ 2.27
ABCA3-204ENST00000566200 STAG3Q9UJ98 1225 aa29.2■■■□□ 2.26
ABCA3-204ENST00000566200 TET3O43151 1660 aa29.2■■■□□ 2.26
ABCA3-204ENST00000566200 RPRD2Q5VT52 1461 aaKnown RBP29.17■■■□□ 2.26
ABCA3-204ENST00000566200 UNC13BO14795 1591 aa29.16■■■□□ 2.26
ABCA3-204ENST00000566200 MYO5BQ9ULV0 1848 aa29.15■■■□□ 2.26
ABCA3-204ENST00000566200 GCC2Q8IWJ2 1684 aa29.14■■■□□ 2.26
ABCA3-204ENST00000566200 SLC52A1Q9NWF4 448 aa29.12■■■□□ 2.25
ABCA3-204ENST00000566200 SLC26A8Q96RN1 970 aa29.09■■■□□ 2.25
ABCA3-204ENST00000566200 SENP3Q9H4L4 574 aaPredicted RBP29.09■■■□□ 2.25
ABCA3-204ENST00000566200 TMEM131LA2VDJ0 1609 aa29.09■■■□□ 2.25
ABCA3-204ENST00000566200 ZFYVE9O95405 1425 aa29.08■■■□□ 2.25
ABCA3-204ENST00000566200 E9PCH4 1651 aa29.08■■■□□ 2.25
ABCA3-204ENST00000566200 NWD1Q149M9 1564 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms