RNA–Protein interactions for RNA: ENST00000565788.1

MAP1LC3B-207, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2 BASIC

Gene MAP1LC3B, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-207ENST00000565788 KDM5DQ9BY66 1539 aa27.42■■□□□ 1.98
MAP1LC3B-207ENST00000565788 CEP170BQ9Y4F5 1589 aaPredicted RBP27.41■■□□□ 1.98
MAP1LC3B-207ENST00000565788 APLP2Q06481 763 aa27.41■■□□□ 1.98
MAP1LC3B-207ENST00000565788 FAM135AQ9P2D6 1515 aa27.41■■□□□ 1.98
MAP1LC3B-207ENST00000565788 RNF17Q9BXT8 1623 aaKnown RBP27.35■■□□□ 1.97
MAP1LC3B-207ENST00000565788 PTPN23Q9H3S7 1636 aa27.35■■□□□ 1.97
MAP1LC3B-207ENST00000565788 PZPP20742 1482 aa27.34■■□□□ 1.97
MAP1LC3B-207ENST00000565788 WASHC2CQ9Y4E1 1318 aa27.34■■□□□ 1.97
MAP1LC3B-207ENST00000565788 EIF2AK4Q9P2K8 1649 aaKnown RBP27.33■■□□□ 1.97
MAP1LC3B-207ENST00000565788 CROCC2H7BZ55 1655 aa27.33■■□□□ 1.97
MAP1LC3B-207ENST00000565788 FBXO31Q5XUX0 539 aaPredicted RBP27.32■■□□□ 1.96
MAP1LC3B-207ENST00000565788 PLA2R1Q13018 1463 aa27.32■■□□□ 1.96
MAP1LC3B-207ENST00000565788 NCKAP5LQ9HCH0 1330 aa27.31■■□□□ 1.96
MAP1LC3B-207ENST00000565788 A2ML1A8K2U0 1454 aa27.31■■□□□ 1.96
MAP1LC3B-207ENST00000565788 DNMT1P26358 1616 aaKnown RBP27.3■■□□□ 1.96
MAP1LC3B-207ENST00000565788 TNRQ92752 1358 aa27.29■■□□□ 1.96
MAP1LC3B-207ENST00000565788 ABCC5O15440 1437 aa27.29■■□□□ 1.96
MAP1LC3B-207ENST00000565788 MROH1Q8NDA8 1641 aa27.28■■□□□ 1.96
MAP1LC3B-207ENST00000565788 TCOF1Q13428 1488 aaKnown RBP27.28■■□□□ 1.96
MAP1LC3B-207ENST00000565788 SHANK2Q9UPX8 1470 aa27.28■■□□□ 1.96
MAP1LC3B-207ENST00000565788 FGD6Q6ZV73 1430 aa27.28■■□□□ 1.96
MAP1LC3B-207ENST00000565788 LTBP4Q8N2S1 1624 aa27.27■■□□□ 1.96
MAP1LC3B-207ENST00000565788 DUOX2Q9NRD8 1548 aa27.27■■□□□ 1.96
MAP1LC3B-207ENST00000565788 ZC3H13Q5T200 1668 aaKnown RBP27.27■■□□□ 1.96
MAP1LC3B-207ENST00000565788 ABCC3O15438 1527 aa27.26■■□□□ 1.96
MAP1LC3B-207ENST00000565788 DAPK1P53355 1430 aa27.24■■□□□ 1.95
MAP1LC3B-207ENST00000565788 PKD2Q13563 968 aa27.24■■□□□ 1.95
MAP1LC3B-207ENST00000565788 KIF15Q9NS87 1388 aa27.22■■□□□ 1.95
MAP1LC3B-207ENST00000565788 CEP152O94986 1710 aa27.22■■□□□ 1.95
MAP1LC3B-207ENST00000565788 RRP7BPQ9NSQ0 103 aa27.18■■□□□ 1.94
MAP1LC3B-207ENST00000565788 ERBINQ96RT1 1412 aa27.17■■□□□ 1.94
MAP1LC3B-207ENST00000565788 POLR1AO95602 1720 aaPredicted RBP27.17■■□□□ 1.94
MAP1LC3B-207ENST00000565788 NLRP1Q9C000 1473 aa27.17■■□□□ 1.94
MAP1LC3B-207ENST00000565788 SPATA31D1Q6ZQQ2 1576 aa27.17■■□□□ 1.94
MAP1LC3B-207ENST00000565788 PRDM15P57071 1507 aaPredicted RBP27.16■■□□□ 1.94
MAP1LC3B-207ENST00000565788 ZNF335Q9H4Z2 1342 aaPredicted RBP27.16■■□□□ 1.94
MAP1LC3B-207ENST00000565788 ERVK-7P63135 1459 aa27.14■■□□□ 1.94
MAP1LC3B-207ENST00000565788 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.93
MAP1LC3B-207ENST00000565788 UGGT1Q9NYU2 1555 aa27.14■■□□□ 1.93
MAP1LC3B-207ENST00000565788 IQSEC2Q5JU85 1478 aa27.13■■□□□ 1.93
MAP1LC3B-207ENST00000565788 CFAP65Q6ZU64 1925 aaKnown RBP27.12■■□□□ 1.93
MAP1LC3B-207ENST00000565788 CHIC2Q9UKJ5 165 aa27.11■■□□□ 1.93
MAP1LC3B-207ENST00000565788 DEPDC5O75140 1603 aa27.11■■□□□ 1.93
MAP1LC3B-207ENST00000565788 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.1■■□□□ 1.932e-9■■■□□ 16.5
MAP1LC3B-207ENST00000565788 ANKRD30AQ9BXX3 1397 aa27.09■■□□□ 1.93
MAP1LC3B-207ENST00000565788 THEMISQ8N1K5 641 aaPredicted RBP27.08■■□□□ 1.93
MAP1LC3B-207ENST00000565788 FAM50AQ14320 339 aaKnown RBP27.05■■□□□ 1.92
MAP1LC3B-207ENST00000565788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.05■■□□□ 1.925e-8■□□□□ 8.4
MAP1LC3B-207ENST00000565788 ADGRL2O95490 1459 aa27.05■■□□□ 1.92
MAP1LC3B-207ENST00000565788 ANKLE2Q86XL3 938 aa27.04■■□□□ 1.92
MAP1LC3B-207ENST00000565788 ARHGAP31Q2M1Z3 1444 aa27.04■■□□□ 1.92
MAP1LC3B-207ENST00000565788 UBR1Q8IWV7 1749 aa27.01■■□□□ 1.91
MAP1LC3B-207ENST00000565788 KANK1Q14678 1352 aa27■■□□□ 1.91
MAP1LC3B-207ENST00000565788 VWDEQ8N2E2 1590 aa27■■□□□ 1.91
MAP1LC3B-207ENST00000565788 MED14O60244 1454 aa26.99■■□□□ 1.91
MAP1LC3B-207ENST00000565788 NPHP4O75161 1426 aaPredicted RBP26.99■■□□□ 1.91
MAP1LC3B-207ENST00000565788 LMTK2Q8IWU2 1503 aa26.97■■□□□ 1.91
MAP1LC3B-207ENST00000565788 IQGAP1P46940 1657 aa26.96■■□□□ 1.91
MAP1LC3B-207ENST00000565788 CPS1P31327 1500 aa26.92■■□□□ 1.9
MAP1LC3B-207ENST00000565788 PIK3C2BO00750 1634 aa26.91■■□□□ 1.9
MAP1LC3B-207ENST00000565788 ANKRD50Q9ULJ7 1429 aa26.9■■□□□ 1.9
MAP1LC3B-207ENST00000565788 EFCAB6Q5THR3 1501 aa26.9■■□□□ 1.9
MAP1LC3B-207ENST00000565788 UBAP1LF5GYI3 381 aa26.9■■□□□ 1.9
MAP1LC3B-207ENST00000565788 ARHGAP23Q9P227 1491 aa26.88■■□□□ 1.89
MAP1LC3B-207ENST00000565788 SLIT1O75093 1534 aa26.88■■□□□ 1.89
MAP1LC3B-207ENST00000565788 SCAF11Q99590 1463 aaKnown RBP26.87■■□□□ 1.89
MAP1LC3B-207ENST00000565788 SYNMO15061 1565 aa26.87■■□□□ 1.89
MAP1LC3B-207ENST00000565788 PPARGC1BQ86YN6 1023 aaKnown RBP26.84■■□□□ 1.89
MAP1LC3B-207ENST00000565788 STRCP1A6NGW2 1772 aa26.84■■□□□ 1.89
MAP1LC3B-207ENST00000565788 NOS1P29475 1434 aa26.83■■□□□ 1.89
MAP1LC3B-207ENST00000565788 LTKP29376 864 aa26.83■■□□□ 1.89
MAP1LC3B-207ENST00000565788 KDM5AP29375 1690 aaKnown RBP26.82■■□□□ 1.88
MAP1LC3B-207ENST00000565788 IDI1Q13907 227 aa26.81■■□□□ 1.88
MAP1LC3B-207ENST00000565788 TXNDC2Q86VQ3 553 aa26.81■■□□□ 1.88
MAP1LC3B-207ENST00000565788 UNC13BO14795 1591 aa26.8■■□□□ 1.88
MAP1LC3B-207ENST00000565788 TET3O43151 1660 aa26.79■■□□□ 1.88
MAP1LC3B-207ENST00000565788 STAG3Q9UJ98 1225 aa26.79■■□□□ 1.88
MAP1LC3B-207ENST00000565788 ROCK1Q13464 1354 aa26.79■■□□□ 1.88
MAP1LC3B-207ENST00000565788 TMEM2Q9UHN6 1383 aa26.79■■□□□ 1.88
MAP1LC3B-207ENST00000565788 RPRD2Q5VT52 1461 aaKnown RBP26.77■■□□□ 1.88
MAP1LC3B-207ENST00000565788 ADGRB3O60242 1522 aa26.76■■□□□ 1.87
MAP1LC3B-207ENST00000565788 EID1Q9Y6B2 187 aa26.76■■□□□ 1.87
MAP1LC3B-207ENST00000565788 GCC2Q8IWJ2 1684 aa26.76■■□□□ 1.87
MAP1LC3B-207ENST00000565788 ITGAEP38570 1179 aa26.74■■□□□ 1.87
MAP1LC3B-207ENST00000565788 LRRC7Q96NW7 1537 aa26.74■■□□□ 1.87
MAP1LC3B-207ENST00000565788 TOM1O60784 492 aa26.72■■□□□ 1.87
MAP1LC3B-207ENST00000565788 DISP3Q9P2K9 1392 aa26.71■■□□□ 1.87
MAP1LC3B-207ENST00000565788 ALKQ9UM73 1620 aa26.71■■□□□ 1.87
MAP1LC3B-207ENST00000565788 SCAF1Q9H7N4 1312 aaKnown RBP26.7■■□□□ 1.87
MAP1LC3B-207ENST00000565788 PIP4K2BP78356 416 aa26.7■■□□□ 1.86
MAP1LC3B-207ENST00000565788 SLC52A1Q9NWF4 448 aa26.7■■□□□ 1.86
MAP1LC3B-207ENST00000565788 IQGAP3Q86VI3 1631 aa26.69■■□□□ 1.86
MAP1LC3B-207ENST00000565788 E9PCH4 1651 aa26.69■■□□□ 1.86
MAP1LC3B-207ENST00000565788 MYO5BQ9ULV0 1848 aa26.68■■□□□ 1.86
MAP1LC3B-207ENST00000565788 XIRP1Q702N8 1843 aaKnown RBP26.62■■□□□ 1.85
MAP1LC3B-207ENST00000565788 TMEM131LA2VDJ0 1609 aa26.62■■□□□ 1.85
MAP1LC3B-207ENST00000565788 NUP155O75694 1391 aa26.61■■□□□ 1.85
MAP1LC3B-207ENST00000565788 HSPA1LP34931 641 aa26.61■■□□□ 1.85
MAP1LC3B-207ENST00000565788 RRBP1Q9P2E9 1410 aaKnown RBP26.61■■□□□ 1.85
MAP1LC3B-207ENST00000565788 ZFYVE9O95405 1425 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms