RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 KDM5DQ9BY66 1539 aa31.19■■■□□ 2.58
CLN6-206ENST00000565471 CAMSAP1Q5T5Y3 1602 aa31.15■■■□□ 2.58
CLN6-206ENST00000565471 CEP170BQ9Y4F5 1589 aaPredicted RBP31.14■■■□□ 2.58
CLN6-206ENST00000565471 CERKQ8TCT0 537 aa31.14■■■□□ 2.58
CLN6-206ENST00000565471 RNF17Q9BXT8 1623 aaKnown RBP31.13■■■□□ 2.57
CLN6-206ENST00000565471 PTPN23Q9H3S7 1636 aa31.13■■■□□ 2.57
CLN6-206ENST00000565471 PZPP20742 1482 aa31.12■■■□□ 2.57
CLN6-206ENST00000565471 EIF2AK4Q9P2K8 1649 aaKnown RBP31.12■■■□□ 2.57
CLN6-206ENST00000565471 WASHC2CQ9Y4E1 1318 aa31.11■■■□□ 2.57
CLN6-206ENST00000565471 SHANK2Q9UPX8 1470 aa31.1■■■□□ 2.57
CLN6-206ENST00000565471 PLA2R1Q13018 1463 aa31.09■■■□□ 2.57
CLN6-206ENST00000565471 CROCC2H7BZ55 1655 aa31.08■■■□□ 2.57
CLN6-206ENST00000565471 FGD6Q6ZV73 1430 aa31.07■■■□□ 2.57
CLN6-206ENST00000565471 TCOF1Q13428 1488 aaKnown RBP31.07■■■□□ 2.56
CLN6-206ENST00000565471 ABCC5O15440 1437 aa31.07■■■□□ 2.56
CLN6-206ENST00000565471 DUOX2Q9NRD8 1548 aa31.06■■■□□ 2.56
CLN6-206ENST00000565471 A2ML1A8K2U0 1454 aa31.06■■■□□ 2.56
CLN6-206ENST00000565471 ZC3H13Q5T200 1668 aaKnown RBP31.04■■■□□ 2.56
CLN6-206ENST00000565471 TNRQ92752 1358 aa31.04■■■□□ 2.56
CLN6-206ENST00000565471 DNMT1P26358 1616 aaKnown RBP31.03■■■□□ 2.56
CLN6-206ENST00000565471 FBXO31Q5XUX0 539 aaPredicted RBP31.02■■■□□ 2.56
CLN6-206ENST00000565471 DAPK1P53355 1430 aa31.01■■■□□ 2.55
CLN6-206ENST00000565471 PKD2Q13563 968 aa31.01■■■□□ 2.55
CLN6-206ENST00000565471 ABCC3O15438 1527 aa31.01■■■□□ 2.55
CLN6-206ENST00000565471 MROH1Q8NDA8 1641 aa31■■■□□ 2.55
CLN6-206ENST00000565471 KIF15Q9NS87 1388 aa30.99■■■□□ 2.55
CLN6-206ENST00000565471 NCKAP5LQ9HCH0 1330 aa30.98■■■□□ 2.55
CLN6-206ENST00000565471 ERBINQ96RT1 1412 aa30.97■■■□□ 2.55
CLN6-206ENST00000565471 LTBP4Q8N2S1 1624 aa30.95■■■□□ 2.55
CLN6-206ENST00000565471 NLRP1Q9C000 1473 aa30.94■■■□□ 2.54
CLN6-206ENST00000565471 RRP7BPQ9NSQ0 103 aa30.91■■■□□ 2.54
CLN6-206ENST00000565471 PRDM15P57071 1507 aaPredicted RBP30.91■■■□□ 2.54
CLN6-206ENST00000565471 SPATA31D1Q6ZQQ2 1576 aa30.91■■■□□ 2.54
CLN6-206ENST00000565471 CEP152O94986 1710 aa30.89■■■□□ 2.54
CLN6-206ENST00000565471 ANKRD30AQ9BXX3 1397 aa30.88■■■□□ 2.53
CLN6-206ENST00000565471 IQSEC2Q5JU85 1478 aa30.87■■■□□ 2.53
CLN6-206ENST00000565471 ERVK-7P63135 1459 aa30.86■■■□□ 2.53
CLN6-206ENST00000565471 DEPDC5O75140 1603 aa30.86■■■□□ 2.53
CLN6-206ENST00000565471 POLR1AO95602 1720 aaPredicted RBP30.85■■■□□ 2.53
CLN6-206ENST00000565471 UGGT1Q9NYU2 1555 aa30.84■■■□□ 2.53
CLN6-206ENST00000565471 ADGRL2O95490 1459 aa30.82■■■□□ 2.53
CLN6-206ENST00000565471 THEMISQ8N1K5 641 aaPredicted RBP30.82■■■□□ 2.52
CLN6-206ENST00000565471 ARHGAP31Q2M1Z3 1444 aa30.81■■■□□ 2.52
CLN6-206ENST00000565471 NEURL4Q96JN8 1562 aa30.81■■■□□ 2.52
CLN6-206ENST00000565471 CHIC2Q9UKJ5 165 aa30.81■■■□□ 2.52
CLN6-206ENST00000565471 ZNF335Q9H4Z2 1342 aaPredicted RBP30.8■■■□□ 2.52
CLN6-206ENST00000565471 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.79■■■□□ 2.521e-10■■□□□ 12.6
CLN6-206ENST00000565471 FAM50AQ14320 339 aaKnown RBP30.78■■■□□ 2.52
CLN6-206ENST00000565471 KANK1Q14678 1352 aa30.77■■■□□ 2.52
CLN6-206ENST00000565471 ANKLE2Q86XL3 938 aa30.76■■■□□ 2.51
CLN6-206ENST00000565471 VWDEQ8N2E2 1590 aa30.74■■■□□ 2.51
CLN6-206ENST00000565471 LMTK2Q8IWU2 1503 aa30.73■■■□□ 2.51
CLN6-206ENST00000565471 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.73■■■□□ 2.51
CLN6-206ENST00000565471 MED14O60244 1454 aa30.72■■■□□ 2.51
CLN6-206ENST00000565471 CFAP65Q6ZU64 1925 aaKnown RBP30.72■■■□□ 2.51
CLN6-206ENST00000565471 UBR1Q8IWV7 1749 aa30.68■■■□□ 2.5
CLN6-206ENST00000565471 NPHP4O75161 1426 aaPredicted RBP30.67■■■□□ 2.5
CLN6-206ENST00000565471 ANKRD50Q9ULJ7 1429 aa30.65■■■□□ 2.5
CLN6-206ENST00000565471 CPS1P31327 1500 aa30.63■■■□□ 2.49
CLN6-206ENST00000565471 IQGAP1P46940 1657 aa30.62■■■□□ 2.49
CLN6-206ENST00000565471 EFCAB6Q5THR3 1501 aa30.62■■■□□ 2.49
CLN6-206ENST00000565471 SLIT1O75093 1534 aa30.59■■■□□ 2.49
CLN6-206ENST00000565471 ARHGAP23Q9P227 1491 aa30.59■■■□□ 2.49
CLN6-206ENST00000565471 ROCK1Q13464 1354 aa30.57■■■□□ 2.48
CLN6-206ENST00000565471 PIK3C2BO00750 1634 aa30.57■■■□□ 2.48
CLN6-206ENST00000565471 SCAF11Q99590 1463 aaKnown RBP30.57■■■□□ 2.48
CLN6-206ENST00000565471 NOS1P29475 1434 aa30.56■■■□□ 2.48
CLN6-206ENST00000565471 KDM5AP29375 1690 aaKnown RBP30.55■■■□□ 2.48
CLN6-206ENST00000565471 SYNMO15061 1565 aa30.54■■■□□ 2.48
CLN6-206ENST00000565471 RPRD2Q5VT52 1461 aaKnown RBP30.53■■■□□ 2.48
CLN6-206ENST00000565471 UBAP1LF5GYI3 381 aa30.52■■■□□ 2.48
CLN6-206ENST00000565471 UNC13BO14795 1591 aa30.52■■■□□ 2.48
CLN6-206ENST00000565471 TET3O43151 1660 aa30.5■■■□□ 2.47
CLN6-206ENST00000565471 IDI1Q13907 227 aa30.49■■■□□ 2.47
CLN6-206ENST00000565471 LTKP29376 864 aa30.48■■■□□ 2.47
CLN6-206ENST00000565471 TXNDC2Q86VQ3 553 aa30.48■■■□□ 2.47
CLN6-206ENST00000565471 TMEM2Q9UHN6 1383 aa30.48■■■□□ 2.47
CLN6-206ENST00000565471 PPARGC1BQ86YN6 1023 aaKnown RBP30.47■■■□□ 2.47
CLN6-206ENST00000565471 STAG3Q9UJ98 1225 aa30.47■■■□□ 2.47
CLN6-206ENST00000565471 EID1Q9Y6B2 187 aa30.46■■■□□ 2.47
CLN6-206ENST00000565471 SLC52A1Q9NWF4 448 aa30.45■■■□□ 2.47
CLN6-206ENST00000565471 GCC2Q8IWJ2 1684 aa30.45■■■□□ 2.46
CLN6-206ENST00000565471 ADGRB3O60242 1522 aa30.43■■■□□ 2.46
CLN6-206ENST00000565471 STRCP1A6NGW2 1772 aa30.42■■■□□ 2.46
CLN6-206ENST00000565471 ITGAEP38570 1179 aa30.39■■■□□ 2.46
CLN6-206ENST00000565471 IQGAP3Q86VI3 1631 aa30.39■■■□□ 2.46
CLN6-206ENST00000565471 TOM1O60784 492 aa30.38■■■□□ 2.45
CLN6-206ENST00000565471 RRBP1Q9P2E9 1410 aaKnown RBP30.37■■■□□ 2.45
CLN6-206ENST00000565471 LRRC7Q96NW7 1537 aa30.37■■■□□ 2.45
CLN6-206ENST00000565471 E9PCH4 1651 aa30.34■■■□□ 2.45
CLN6-206ENST00000565471 NUP155O75694 1391 aa30.3■■■□□ 2.44
CLN6-206ENST00000565471 TMEM131LA2VDJ0 1609 aa30.28■■■□□ 2.44
CLN6-206ENST00000565471 ALKQ9UM73 1620 aa30.28■■■□□ 2.44
CLN6-206ENST00000565471 ZFYVE9O95405 1425 aa30.26■■■□□ 2.43
CLN6-206ENST00000565471 PIP4K2BP78356 416 aa30.26■■■□□ 2.43
CLN6-206ENST00000565471 DISP3Q9P2K9 1392 aa30.26■■■□□ 2.43
CLN6-206ENST00000565471 SCAF1Q9H7N4 1312 aaKnown RBP30.25■■■□□ 2.43
CLN6-206ENST00000565471 MYO5BQ9ULV0 1848 aa30.25■■■□□ 2.43
CLN6-206ENST00000565471 HDGFP51858 240 aaKnown RBP30.21■■■□□ 2.43
CLN6-206ENST00000565471 RIMS2Q9UQ26 1411 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms