RNA–Protein interactions for RNA: ENST00000563510.5

FANCA-211, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-211ENST00000563510 PLA2R1Q13018 1463 aa17.32■□□□□ 0.36
FANCA-211ENST00000563510 HNRNPMP52272 730 aaKnown RBP eCLIP17.32■□□□□ 0.362e-11■■■■■ 30.2
FANCA-211ENST00000563510 ATXN8OSP0DMR3 200 aa17.31■□□□□ 0.36
FANCA-211ENST00000563510 POLR1AO95602 1720 aaPredicted RBP17.3■□□□□ 0.36
FANCA-211ENST00000563510 DISP3Q9P2K9 1392 aa17.29■□□□□ 0.36
FANCA-211ENST00000563510 FAM135AQ9P2D6 1515 aa17.28■□□□□ 0.36
FANCA-211ENST00000563510 PTPRKQ15262 1439 aa17.28■□□□□ 0.36
FANCA-211ENST00000563510 TCOF1Q13428 1488 aaKnown RBP17.26■□□□□ 0.35
FANCA-211ENST00000563510 RTEL1-TNFRSF6BF6WH68 1400 aa17.26■□□□□ 0.35
FANCA-211ENST00000563510 CEP162Q5TB80 1403 aa17.25■□□□□ 0.35
FANCA-211ENST00000563510 MBD5Q9P267 1494 aa17.24■□□□□ 0.35
FANCA-211ENST00000563510 PKD2Q13563 968 aa17.24■□□□□ 0.35
FANCA-211ENST00000563510 DNMT1P26358 1616 aaKnown RBP17.24■□□□□ 0.35
FANCA-211ENST00000563510 GGT6Q6P531 493 aa17.23■□□□□ 0.35
FANCA-211ENST00000563510 A2ML1A8K2U0 1454 aa17.23■□□□□ 0.35
FANCA-211ENST00000563510 KDM5DQ9BY66 1539 aa17.22■□□□□ 0.35
FANCA-211ENST00000563510 CCDC141Q6ZP82 1450 aa17.21■□□□□ 0.35
FANCA-211ENST00000563510 NCKAP5LQ9HCH0 1330 aa17.21■□□□□ 0.34
FANCA-211ENST00000563510 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
FANCA-211ENST00000563510 CAMSAP2Q08AD1 1489 aa17.19■□□□□ 0.34
FANCA-211ENST00000563510 ARHGEF5Q12774 1597 aa17.19■□□□□ 0.34
FANCA-211ENST00000563510 ZNF335Q9H4Z2 1342 aaPredicted RBP17.19■□□□□ 0.34
FANCA-211ENST00000563510 DHX29Q7Z478 1369 aaKnown RBP17.18■□□□□ 0.34
FANCA-211ENST00000563510 ZNF644Q9H582 1327 aaPredicted RBP17.18■□□□□ 0.34
FANCA-211ENST00000563510 PZPP20742 1482 aa17.18■□□□□ 0.34
FANCA-211ENST00000563510 ZC3H13Q5T200 1668 aaKnown RBP17.17■□□□□ 0.34
FANCA-211ENST00000563510 ILDR2Q71H61 639 aa17.16■□□□□ 0.34
FANCA-211ENST00000563510 NCOA2Q15596 1464 aa17.16■□□□□ 0.34
FANCA-211ENST00000563510 NEURL4Q96JN8 1562 aa17.15■□□□□ 0.34
FANCA-211ENST00000563510 SOCS7O14512 581 aa17.15■□□□□ 0.34
FANCA-211ENST00000563510 CPS1P31327 1500 aa17.14■□□□□ 0.33
FANCA-211ENST00000563510 TNRQ92752 1358 aa17.14■□□□□ 0.33
FANCA-211ENST00000563510 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
FANCA-211ENST00000563510 UBAP1LF5GYI3 381 aa17.13■□□□□ 0.33
FANCA-211ENST00000563510 RSPH4AQ5TD94 716 aa17.13■□□□□ 0.33
FANCA-211ENST00000563510 DEPDC5O75140 1603 aa17.13■□□□□ 0.33
FANCA-211ENST00000563510 EIF2AK4Q9P2K8 1649 aaKnown RBP17.13■□□□□ 0.33
FANCA-211ENST00000563510 NLRP1Q9C000 1473 aa17.12■□□□□ 0.33
FANCA-211ENST00000563510 KIF3BO15066 747 aa17.11■□□□□ 0.33
FANCA-211ENST00000563510 MAST1Q9Y2H9 1570 aa17.11■□□□□ 0.33
FANCA-211ENST00000563510 UGGT1Q9NYU2 1555 aa17.09■□□□□ 0.33
FANCA-211ENST00000563510 IQGAP1P46940 1657 aa17.09■□□□□ 0.33
FANCA-211ENST00000563510 WASHC2CQ9Y4E1 1318 aa17.08■□□□□ 0.32
FANCA-211ENST00000563510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.08■□□□□ 0.321e-8■■■□□ 16.4
FANCA-211ENST00000563510 SHANK2Q9UPX8 1470 aa17.07■□□□□ 0.32
FANCA-211ENST00000563510 CEP152O94986 1710 aa17.07■□□□□ 0.32
FANCA-211ENST00000563510 VWDEQ8N2E2 1590 aa17.06■□□□□ 0.32
FANCA-211ENST00000563510 MIA2Q96PC5 1412 aa17.05■□□□□ 0.32
FANCA-211ENST00000563510 MED14O60244 1454 aa17.05■□□□□ 0.32
FANCA-211ENST00000563510 CFAP65Q6ZU64 1925 aaKnown RBP17.04■□□□□ 0.32
FANCA-211ENST00000563510 SYNMO15061 1565 aa17.04■□□□□ 0.32
FANCA-211ENST00000563510 TSPY4P0CV99 314 aa17.04■□□□□ 0.32
FANCA-211ENST00000563510 TSPY10P0CW01 314 aa17.04■□□□□ 0.32
FANCA-211ENST00000563510 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
FANCA-211ENST00000563510 ABCC3O15438 1527 aa17.04■□□□□ 0.32
FANCA-211ENST00000563510 LRRC9Q6ZRR7 1453 aa17.04■□□□□ 0.32
FANCA-211ENST00000563510 ANKLE2Q86XL3 938 aa17.03■□□□□ 0.32
FANCA-211ENST00000563510 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
FANCA-211ENST00000563510 CROCC2H7BZ55 1655 aa17.03■□□□□ 0.32
FANCA-211ENST00000563510 VPS8Q8N3P4 1428 aa17.03■□□□□ 0.32
FANCA-211ENST00000563510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.02■□□□□ 0.32
FANCA-211ENST00000563510 MROH1Q8NDA8 1641 aa17.02■□□□□ 0.31
FANCA-211ENST00000563510 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.31
FANCA-211ENST00000563510 UBR1Q8IWV7 1749 aa17.01■□□□□ 0.31
FANCA-211ENST00000563510 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
FANCA-211ENST00000563510 NPHP4O75161 1426 aaPredicted RBP17.01■□□□□ 0.31
FANCA-211ENST00000563510 TOM1O60784 492 aa17■□□□□ 0.31
FANCA-211ENST00000563510 STRCP1A6NGW2 1772 aa17■□□□□ 0.31
FANCA-211ENST00000563510 ERVK-7P63135 1459 aa16.99■□□□□ 0.31
FANCA-211ENST00000563510 DUOX2Q9NRD8 1548 aa16.98■□□□□ 0.31
FANCA-211ENST00000563510 MYOM3Q5VTT5 1437 aa16.96■□□□□ 0.31
FANCA-211ENST00000563510 PRDM15P57071 1507 aaPredicted RBP16.96■□□□□ 0.31
FANCA-211ENST00000563510 PIP4K2BP78356 416 aa16.95■□□□□ 0.3
FANCA-211ENST00000563510 FKBP8Q14318 412 aa16.95■□□□□ 0.3
FANCA-211ENST00000563510 ALKQ9UM73 1620 aa16.94■□□□□ 0.3
FANCA-211ENST00000563510 HSPA1LP34931 641 aa16.93■□□□□ 0.3
FANCA-211ENST00000563510 KDM5AP29375 1690 aaKnown RBP16.93■□□□□ 0.3
FANCA-211ENST00000563510 ERBINQ96RT1 1412 aa16.91■□□□□ 0.3
FANCA-211ENST00000563510 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
FANCA-211ENST00000563510 PTPN23Q9H3S7 1636 aa16.91■□□□□ 0.3
FANCA-211ENST00000563510 SCAF11Q99590 1463 aaKnown RBP16.91■□□□□ 0.3
FANCA-211ENST00000563510 XIRP1Q702N8 1843 aaKnown RBP16.91■□□□□ 0.3
FANCA-211ENST00000563510 SLIT1O75093 1534 aa16.91■□□□□ 0.3
FANCA-211ENST00000563510 LRRC7Q96NW7 1537 aa16.91■□□□□ 0.3
FANCA-211ENST00000563510 ARHGAP31Q2M1Z3 1444 aa16.89■□□□□ 0.29
FANCA-211ENST00000563510 PIK3C2BO00750 1634 aa16.88■□□□□ 0.29
FANCA-211ENST00000563510 KIF15Q9NS87 1388 aa16.88■□□□□ 0.29
FANCA-211ENST00000563510 ARHGAP23Q9P227 1491 aa16.87■□□□□ 0.29
FANCA-211ENST00000563510 SAMD1Q6SPF0 538 aaPredicted RBP16.87■□□□□ 0.29
FANCA-211ENST00000563510 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
FANCA-211ENST00000563510 KANK4Q5T7N3 995 aaPredicted RBP16.84■□□□□ 0.29
FANCA-211ENST00000563510 KANK1Q14678 1352 aa16.83■□□□□ 0.28
FANCA-211ENST00000563510 ABCC5O15440 1437 aa16.82■□□□□ 0.28
FANCA-211ENST00000563510 DAPK1P53355 1430 aa16.82■□□□□ 0.28
FANCA-211ENST00000563510 EFCAB6Q5THR3 1501 aa16.81■□□□□ 0.28
FANCA-211ENST00000563510 LMTK2Q8IWU2 1503 aa16.81■□□□□ 0.28
FANCA-211ENST00000563510 EID1Q9Y6B2 187 aa16.8■□□□□ 0.28
FANCA-211ENST00000563510 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
FANCA-211ENST00000563510 APLP2Q06481 763 aa16.78■□□□□ 0.28
FANCA-211ENST00000563510 TXNDC2Q86VQ3 553 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms