RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 PTPN23Q9H3S7 1636 aa23.7■■□□□ 1.39
LPCAT4-204ENST00000563240 FGD6Q6ZV73 1430 aa23.7■■□□□ 1.38
LPCAT4-204ENST00000563240 NCKAP5LQ9HCH0 1330 aa23.69■■□□□ 1.38
LPCAT4-204ENST00000563240 CHIC2Q9UKJ5 165 aa23.69■■□□□ 1.38
LPCAT4-204ENST00000563240 KDM5DQ9BY66 1539 aa23.68■■□□□ 1.38
LPCAT4-204ENST00000563240 NCOA1Q15788 1441 aa23.67■■□□□ 1.38
LPCAT4-204ENST00000563240 CAMSAP1Q5T5Y3 1602 aa23.67■■□□□ 1.38
LPCAT4-204ENST00000563240 FAM50AQ14320 339 aaKnown RBP23.66■■□□□ 1.38
LPCAT4-204ENST00000563240 MYO3AQ8NEV4 1616 aa23.65■■□□□ 1.38
LPCAT4-204ENST00000563240 DAPK1P53355 1430 aa23.65■■□□□ 1.38
LPCAT4-204ENST00000563240 TNRQ92752 1358 aa23.65■■□□□ 1.38
LPCAT4-204ENST00000563240 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
LPCAT4-204ENST00000563240 PTPRTO14522 1441 aa23.64■■□□□ 1.37
LPCAT4-204ENST00000563240 PPARGC1BQ86YN6 1023 aaKnown RBP23.63■■□□□ 1.37
LPCAT4-204ENST00000563240 PZPP20742 1482 aa23.62■■□□□ 1.37
LPCAT4-204ENST00000563240 TCOF1Q13428 1488 aaKnown RBP23.62■■□□□ 1.37
LPCAT4-204ENST00000563240 CEP170BQ9Y4F5 1589 aaPredicted RBP23.62■■□□□ 1.37
LPCAT4-204ENST00000563240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.62■■□□□ 1.37
LPCAT4-204ENST00000563240 DUOX2Q9NRD8 1548 aa23.61■■□□□ 1.37
LPCAT4-204ENST00000563240 SHANK2Q9UPX8 1470 aa23.6■■□□□ 1.37
LPCAT4-204ENST00000563240 A2ML1A8K2U0 1454 aa23.59■■□□□ 1.37
LPCAT4-204ENST00000563240 FAM135AQ9P2D6 1515 aa23.59■■□□□ 1.37
LPCAT4-204ENST00000563240 PKD2Q13563 968 aa23.58■■□□□ 1.37
LPCAT4-204ENST00000563240 DNMT1P26358 1616 aaKnown RBP23.58■■□□□ 1.36
LPCAT4-204ENST00000563240 RNF17Q9BXT8 1623 aaKnown RBP23.57■■□□□ 1.36
LPCAT4-204ENST00000563240 ABCC3O15438 1527 aa23.57■■□□□ 1.36
LPCAT4-204ENST00000563240 ANKRD30AQ9BXX3 1397 aa23.56■■□□□ 1.36
LPCAT4-204ENST00000563240 EIF2AK4Q9P2K8 1649 aaKnown RBP23.56■■□□□ 1.36
LPCAT4-204ENST00000563240 CROCC2H7BZ55 1655 aa23.56■■□□□ 1.36
LPCAT4-204ENST00000563240 ZNF142P52746 1687 aaPredicted RBP23.56■■□□□ 1.36
LPCAT4-204ENST00000563240 PLA2R1Q13018 1463 aa23.54■■□□□ 1.36
LPCAT4-204ENST00000563240 ERBINQ96RT1 1412 aa23.53■■□□□ 1.36
LPCAT4-204ENST00000563240 MROH1Q8NDA8 1641 aa23.53■■□□□ 1.36
LPCAT4-204ENST00000563240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.51■■□□□ 1.35
LPCAT4-204ENST00000563240 THEMISQ8N1K5 641 aaPredicted RBP23.5■■□□□ 1.35
LPCAT4-204ENST00000563240 ZNF335Q9H4Z2 1342 aaPredicted RBP23.5■■□□□ 1.35
LPCAT4-204ENST00000563240 ZC3H13Q5T200 1668 aaKnown RBP23.48■■□□□ 1.35
LPCAT4-204ENST00000563240 CEP152O94986 1710 aa23.47■■□□□ 1.35
LPCAT4-204ENST00000563240 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
LPCAT4-204ENST00000563240 KANK1Q14678 1352 aa23.47■■□□□ 1.35
LPCAT4-204ENST00000563240 ERVK-7P63135 1459 aa23.47■■□□□ 1.35
LPCAT4-204ENST00000563240 NLRP1Q9C000 1473 aa23.47■■□□□ 1.35
LPCAT4-204ENST00000563240 ITGAEP38570 1179 aa23.46■■□□□ 1.35
LPCAT4-204ENST00000563240 LTBP4Q8N2S1 1624 aa23.45■■□□□ 1.34
LPCAT4-204ENST00000563240 UGGT1Q9NYU2 1555 aa23.44■■□□□ 1.34
LPCAT4-204ENST00000563240 SPATA31D1Q6ZQQ2 1576 aa23.44■■□□□ 1.34
LPCAT4-204ENST00000563240 PRDM15P57071 1507 aaPredicted RBP23.43■■□□□ 1.34
LPCAT4-204ENST00000563240 CFAP65Q6ZU64 1925 aaKnown RBP23.42■■□□□ 1.34
LPCAT4-204ENST00000563240 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
LPCAT4-204ENST00000563240 ARHGAP31Q2M1Z3 1444 aa23.39■■□□□ 1.33
LPCAT4-204ENST00000563240 ANKRD50Q9ULJ7 1429 aa23.39■■□□□ 1.33
LPCAT4-204ENST00000563240 DEPDC5O75140 1603 aa23.37■■□□□ 1.33
LPCAT4-204ENST00000563240 NEURL4Q96JN8 1562 aa23.35■■□□□ 1.33
LPCAT4-204ENST00000563240 STAG3Q9UJ98 1225 aa23.35■■□□□ 1.33
LPCAT4-204ENST00000563240 NPHP4O75161 1426 aaPredicted RBP23.34■■□□□ 1.33
LPCAT4-204ENST00000563240 POLR1AO95602 1720 aaPredicted RBP23.33■■□□□ 1.32
LPCAT4-204ENST00000563240 IDI1Q13907 227 aa23.31■■□□□ 1.32
LPCAT4-204ENST00000563240 TXNDC2Q86VQ3 553 aa23.31■■□□□ 1.32
LPCAT4-204ENST00000563240 VWDEQ8N2E2 1590 aa23.31■■□□□ 1.32
LPCAT4-204ENST00000563240 LMTK2Q8IWU2 1503 aa23.3■■□□□ 1.32
LPCAT4-204ENST00000563240 UBAP1LF5GYI3 381 aa23.3■■□□□ 1.32
LPCAT4-204ENST00000563240 LTKP29376 864 aa23.29■■□□□ 1.32
LPCAT4-204ENST00000563240 MED14O60244 1454 aa23.28■■□□□ 1.32
LPCAT4-204ENST00000563240 ROCK1Q13464 1354 aa23.27■■□□□ 1.32
LPCAT4-204ENST00000563240 IQSEC2Q5JU85 1478 aa23.27■■□□□ 1.32
LPCAT4-204ENST00000563240 UBR1Q8IWV7 1749 aa23.27■■□□□ 1.32
LPCAT4-204ENST00000563240 EID1Q9Y6B2 187 aa23.26■■□□□ 1.31
LPCAT4-204ENST00000563240 EFCAB6Q5THR3 1501 aa23.24■■□□□ 1.31
LPCAT4-204ENST00000563240 PIK3C2BO00750 1634 aa23.24■■□□□ 1.31
LPCAT4-204ENST00000563240 SCAF11Q99590 1463 aaKnown RBP23.24■■□□□ 1.31
LPCAT4-204ENST00000563240 NOS1P29475 1434 aa23.23■■□□□ 1.31
LPCAT4-204ENST00000563240 IQGAP1P46940 1657 aa23.22■■□□□ 1.31
LPCAT4-204ENST00000563240 SLC52A1Q9NWF4 448 aa23.21■■□□□ 1.31
LPCAT4-204ENST00000563240 TMEM2Q9UHN6 1383 aa23.21■■□□□ 1.31
LPCAT4-204ENST00000563240 SYNMO15061 1565 aa23.21■■□□□ 1.31
LPCAT4-204ENST00000563240 ARHGAP23Q9P227 1491 aa23.2■■□□□ 1.3
LPCAT4-204ENST00000563240 SCAF1Q9H7N4 1312 aaKnown RBP23.2■■□□□ 1.3
LPCAT4-204ENST00000563240 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
LPCAT4-204ENST00000563240 SLIT1O75093 1534 aa23.19■■□□□ 1.3
LPCAT4-204ENST00000563240 CPS1P31327 1500 aa23.19■■□□□ 1.3
LPCAT4-204ENST00000563240 NUP155O75694 1391 aa23.19■■□□□ 1.3
LPCAT4-204ENST00000563240 CHGAP10645 457 aaKnown RBP23.17■■□□□ 1.3
LPCAT4-204ENST00000563240 PIP4K2BP78356 416 aa23.17■■□□□ 1.3
LPCAT4-204ENST00000563240 UNC13BO14795 1591 aa23.16■■□□□ 1.3
LPCAT4-204ENST00000563240 RPRD2Q5VT52 1461 aaKnown RBP23.16■■□□□ 1.3
LPCAT4-204ENST00000563240 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
LPCAT4-204ENST00000563240 BCANQ96GW7 911 aa23.15■■□□□ 1.3
LPCAT4-204ENST00000563240 TET3O43151 1660 aa23.15■■□□□ 1.3
LPCAT4-204ENST00000563240 TOM1O60784 492 aa23.13■■□□□ 1.29
LPCAT4-204ENST00000563240 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
LPCAT4-204ENST00000563240 ADGRB3O60242 1522 aa23.11■■□□□ 1.29
LPCAT4-204ENST00000563240 LRRC7Q96NW7 1537 aa23.08■■□□□ 1.29
LPCAT4-204ENST00000563240 PPP1R15AO75807 674 aaPredicted RBP23.08■■□□□ 1.29
LPCAT4-204ENST00000563240 NUTM2DQ5VT03 806 aaPredicted RBP23.08■■□□□ 1.29
LPCAT4-204ENST00000563240 GCC2Q8IWJ2 1684 aa23.08■■□□□ 1.29
LPCAT4-204ENST00000563240 STRCP1A6NGW2 1772 aa23.08■■□□□ 1.29
LPCAT4-204ENST00000563240 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.28
LPCAT4-204ENST00000563240 E9PCH4 1651 aa23.07■■□□□ 1.28
LPCAT4-204ENST00000563240 KDM5AP29375 1690 aaKnown RBP23.06■■□□□ 1.28
LPCAT4-204ENST00000563240 DISP3Q9P2K9 1392 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms