RNA–Protein interactions for RNA: ENST00000562776.5

SIN3A-204, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-204ENST00000562776 PKD2Q13563 968 aa17.03■□□□□ 0.32
SIN3A-204ENST00000562776 PLA2R1Q13018 1463 aa17.03■□□□□ 0.32
SIN3A-204ENST00000562776 TCOF1Q13428 1488 aaKnown RBP17.03■□□□□ 0.32
SIN3A-204ENST00000562776 LTBP4Q8N2S1 1624 aa17.03■□□□□ 0.32
SIN3A-204ENST00000562776 FAM135AQ9P2D6 1515 aa17.01■□□□□ 0.31
SIN3A-204ENST00000562776 IQSEC2Q5JU85 1478 aa17.01■□□□□ 0.31
SIN3A-204ENST00000562776 KIF3BO15066 747 aa17.01■□□□□ 0.31
SIN3A-204ENST00000562776 ZNF142P52746 1687 aaPredicted RBP17.01■□□□□ 0.31
SIN3A-204ENST00000562776 SHANK2Q9UPX8 1470 aa17■□□□□ 0.31
SIN3A-204ENST00000562776 CROCC2H7BZ55 1655 aa17■□□□□ 0.31
SIN3A-204ENST00000562776 NCKAP5LQ9HCH0 1330 aa16.99■□□□□ 0.31
SIN3A-204ENST00000562776 MYO3AQ8NEV4 1616 aa16.99■□□□□ 0.31
SIN3A-204ENST00000562776 CEP170BQ9Y4F5 1589 aaPredicted RBP16.98■□□□□ 0.31
SIN3A-204ENST00000562776 ABCC5O15440 1437 aa16.98■□□□□ 0.31
SIN3A-204ENST00000562776 DNMT1P26358 1616 aaKnown RBP16.98■□□□□ 0.31
SIN3A-204ENST00000562776 DAPK1P53355 1430 aa16.97■□□□□ 0.31
SIN3A-204ENST00000562776 A2ML1A8K2U0 1454 aa16.97■□□□□ 0.31
SIN3A-204ENST00000562776 WASHC2CQ9Y4E1 1318 aa16.96■□□□□ 0.31
SIN3A-204ENST00000562776 PZPP20742 1482 aa16.95■□□□□ 0.3
SIN3A-204ENST00000562776 FBXO31Q5XUX0 539 aaPredicted RBP16.95■□□□□ 0.3
SIN3A-204ENST00000562776 KDM5DQ9BY66 1539 aa16.95■□□□□ 0.3
SIN3A-204ENST00000562776 TNRQ92752 1358 aa16.93■□□□□ 0.3
SIN3A-204ENST00000562776 EIF2AK4Q9P2K8 1649 aaKnown RBP16.93■□□□□ 0.3
SIN3A-204ENST00000562776 DUOX2Q9NRD8 1548 aa16.92■□□□□ 0.3
SIN3A-204ENST00000562776 RNF17Q9BXT8 1623 aaKnown RBP16.92■□□□□ 0.3
SIN3A-204ENST00000562776 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
SIN3A-204ENST00000562776 ZNF335Q9H4Z2 1342 aaPredicted RBP16.91■□□□□ 0.3
SIN3A-204ENST00000562776 FAM50AQ14320 339 aaKnown RBP16.89■□□□□ 0.29
SIN3A-204ENST00000562776 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
SIN3A-204ENST00000562776 ERBINQ96RT1 1412 aa16.88■□□□□ 0.29
SIN3A-204ENST00000562776 NLRP1Q9C000 1473 aa16.88■□□□□ 0.29
SIN3A-204ENST00000562776 ANKRD30AQ9BXX3 1397 aa16.88■□□□□ 0.29
SIN3A-204ENST00000562776 RRP7BPQ9NSQ0 103 aa16.87■□□□□ 0.29
SIN3A-204ENST00000562776 DISP3Q9P2K9 1392 aa16.87■□□□□ 0.29
SIN3A-204ENST00000562776 ADGRL2O95490 1459 aa16.86■□□□□ 0.29
SIN3A-204ENST00000562776 MROH1Q8NDA8 1641 aa16.86■□□□□ 0.29
SIN3A-204ENST00000562776 ANKLE2Q86XL3 938 aa16.86■□□□□ 0.29
SIN3A-204ENST00000562776 PPARGC1BQ86YN6 1023 aaKnown RBP16.86■□□□□ 0.29
SIN3A-204ENST00000562776 CHIC2Q9UKJ5 165 aa16.85■□□□□ 0.29
SIN3A-204ENST00000562776 ZC3H13Q5T200 1668 aaKnown RBP16.85■□□□□ 0.29
SIN3A-204ENST00000562776 ABCC3O15438 1527 aa16.84■□□□□ 0.29
SIN3A-204ENST00000562776 SOCS7O14512 581 aa16.83■□□□□ 0.28
SIN3A-204ENST00000562776 MED14O60244 1454 aa16.83■□□□□ 0.28
SIN3A-204ENST00000562776 PRDM15P57071 1507 aaPredicted RBP16.83■□□□□ 0.28
SIN3A-204ENST00000562776 SPATA31D1Q6ZQQ2 1576 aa16.82■□□□□ 0.28
SIN3A-204ENST00000562776 NEURL4Q96JN8 1562 aa16.82■□□□□ 0.28
SIN3A-204ENST00000562776 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.82■□□□□ 0.289e-8■■■□□ 15.5
SIN3A-204ENST00000562776 UGGT1Q9NYU2 1555 aa16.81■□□□□ 0.28
SIN3A-204ENST00000562776 DEPDC5O75140 1603 aa16.81■□□□□ 0.28
SIN3A-204ENST00000562776 POLR1AO95602 1720 aaPredicted RBP16.8■□□□□ 0.28
SIN3A-204ENST00000562776 UBAP1LF5GYI3 381 aa16.8■□□□□ 0.28
SIN3A-204ENST00000562776 ILDR2Q71H61 639 aa16.79■□□□□ 0.28
SIN3A-204ENST00000562776 CPS1P31327 1500 aa16.79■□□□□ 0.28
SIN3A-204ENST00000562776 ERVK-7P63135 1459 aa16.79■□□□□ 0.28
SIN3A-204ENST00000562776 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
SIN3A-204ENST00000562776 CEP152O94986 1710 aa16.78■□□□□ 0.28
SIN3A-204ENST00000562776 NPHP4O75161 1426 aaPredicted RBP16.77■□□□□ 0.27
SIN3A-204ENST00000562776 RRBP1Q9P2E9 1410 aaKnown RBP16.77■□□□□ 0.27
SIN3A-204ENST00000562776 ROCK1Q13464 1354 aa16.77■□□□□ 0.27
SIN3A-204ENST00000562776 ANKRD50Q9ULJ7 1429 aa16.76■□□□□ 0.27
SIN3A-204ENST00000562776 VWDEQ8N2E2 1590 aa16.74■□□□□ 0.27
SIN3A-204ENST00000562776 KANK1Q14678 1352 aa16.74■□□□□ 0.27
SIN3A-204ENST00000562776 TOM1O60784 492 aa16.73■□□□□ 0.27
SIN3A-204ENST00000562776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.273e-9■■■□□ 16
SIN3A-204ENST00000562776 LMTK2Q8IWU2 1503 aa16.72■□□□□ 0.27
SIN3A-204ENST00000562776 ITGAEP38570 1179 aa16.71■□□□□ 0.27
SIN3A-204ENST00000562776 ARHGAP23Q9P227 1491 aa16.7■□□□□ 0.26
SIN3A-204ENST00000562776 UBR1Q8IWV7 1749 aa16.69■□□□□ 0.26
SIN3A-204ENST00000562776 SLIT1O75093 1534 aa16.69■□□□□ 0.26
SIN3A-204ENST00000562776 IQGAP1P46940 1657 aa16.69■□□□□ 0.26
SIN3A-204ENST00000562776 EFCAB6Q5THR3 1501 aa16.68■□□□□ 0.26
SIN3A-204ENST00000562776 UNC13BO14795 1591 aa16.68■□□□□ 0.26
SIN3A-204ENST00000562776 LTKP29376 864 aa16.67■□□□□ 0.26
SIN3A-204ENST00000562776 SCAF11Q99590 1463 aaKnown RBP16.67■□□□□ 0.26
SIN3A-204ENST00000562776 TXNDC2Q86VQ3 553 aa16.66■□□□□ 0.26
SIN3A-204ENST00000562776 CFAP65Q6ZU64 1925 aaKnown RBP16.65■□□□□ 0.26
SIN3A-204ENST00000562776 EID1Q9Y6B2 187 aa16.64■□□□□ 0.25
SIN3A-204ENST00000562776 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.25
SIN3A-204ENST00000562776 HSPA1LP34931 641 aa16.63■□□□□ 0.25
SIN3A-204ENST00000562776 IDI1Q13907 227 aa16.63■□□□□ 0.25
SIN3A-204ENST00000562776 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
SIN3A-204ENST00000562776 TET3O43151 1660 aa16.62■□□□□ 0.25
SIN3A-204ENST00000562776 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
SIN3A-204ENST00000562776 NOS1P29475 1434 aa16.62■□□□□ 0.25
SIN3A-204ENST00000562776 RPRD2Q5VT52 1461 aaKnown RBP16.62■□□□□ 0.25
SIN3A-204ENST00000562776 PIP4K2BP78356 416 aa16.62■□□□□ 0.25
SIN3A-204ENST00000562776 ALKQ9UM73 1620 aa16.62■□□□□ 0.25
SIN3A-204ENST00000562776 STRCP1A6NGW2 1772 aa16.61■□□□□ 0.25
SIN3A-204ENST00000562776 SLC52A1Q9NWF4 448 aa16.61■□□□□ 0.25
SIN3A-204ENST00000562776 IQGAP3Q86VI3 1631 aa16.6■□□□□ 0.25
SIN3A-204ENST00000562776 SYNMO15061 1565 aa16.6■□□□□ 0.25
SIN3A-204ENST00000562776 PIK3C2BO00750 1634 aa16.59■□□□□ 0.25
SIN3A-204ENST00000562776 GCC2Q8IWJ2 1684 aa16.59■□□□□ 0.25
SIN3A-204ENST00000562776 SCAF1Q9H7N4 1312 aaKnown RBP16.59■□□□□ 0.25
SIN3A-204ENST00000562776 NAIPQ13075 1403 aa16.59■□□□□ 0.25
SIN3A-204ENST00000562776 STAG3Q9UJ98 1225 aa16.58■□□□□ 0.24
SIN3A-204ENST00000562776 HFM1A2PYH4 1435 aa16.57■□□□□ 0.24
SIN3A-204ENST00000562776 NUP155O75694 1391 aa16.57■□□□□ 0.24
SIN3A-204ENST00000562776 E9PCH4 1651 aa16.54■□□□□ 0.24
SIN3A-204ENST00000562776 KCNA6P17658 529 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms