RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 FBXO31Q5XUX0 539 aaPredicted RBP26.39■■□□□ 1.82
CMTM3-205ENST00000562707 ZNF142P52746 1687 aaPredicted RBP26.38■■□□□ 1.81
CMTM3-205ENST00000562707 A2ML1A8K2U0 1454 aa26.38■■□□□ 1.81
CMTM3-205ENST00000562707 CAMSAP2Q08AD1 1489 aa26.37■■□□□ 1.81
CMTM3-205ENST00000562707 TNRQ92752 1358 aa26.36■■□□□ 1.81
CMTM3-205ENST00000562707 ILDR2Q71H61 639 aa26.36■■□□□ 1.81
CMTM3-205ENST00000562707 PZPP20742 1482 aa26.3■■□□□ 1.8
CMTM3-205ENST00000562707 KDM5DQ9BY66 1539 aa26.3■■□□□ 1.8
CMTM3-205ENST00000562707 FAM135AQ9P2D6 1515 aa26.29■■□□□ 1.8
CMTM3-205ENST00000562707 THEMISQ8N1K5 641 aaPredicted RBP26.29■■□□□ 1.8
CMTM3-205ENST00000562707 DNMT1P26358 1616 aaKnown RBP26.28■■□□□ 1.8
CMTM3-205ENST00000562707 SOCS7O14512 581 aa26.28■■□□□ 1.8
CMTM3-205ENST00000562707 ANKLE2Q86XL3 938 aa26.28■■□□□ 1.8
CMTM3-205ENST00000562707 MIA2Q96PC5 1412 aa26.26■■□□□ 1.79
CMTM3-205ENST00000562707 ARHGEF5Q12774 1597 aa26.25■■□□□ 1.79
CMTM3-205ENST00000562707 LOC105371045A0A1W2PR82 267 aa26.25■■□□□ 1.79
CMTM3-205ENST00000562707 LRRC9Q6ZRR7 1453 aa26.24■■□□□ 1.79
CMTM3-205ENST00000562707 VPS8Q8N3P4 1428 aa26.24■■□□□ 1.79
CMTM3-205ENST00000562707 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
CMTM3-205ENST00000562707 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.23■■□□□ 1.79
CMTM3-205ENST00000562707 NLRP1Q9C000 1473 aa26.21■■□□□ 1.79
CMTM3-205ENST00000562707 TOM1O60784 492 aa26.19■■□□□ 1.78
CMTM3-205ENST00000562707 KANK4Q5T7N3 995 aaPredicted RBP26.19■■□□□ 1.78
CMTM3-205ENST00000562707 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
CMTM3-205ENST00000562707 SHANK2Q9UPX8 1470 aa26.17■■□□□ 1.78
CMTM3-205ENST00000562707 CPS1P31327 1500 aa26.16■■□□□ 1.78
CMTM3-205ENST00000562707 UGGT1Q9NYU2 1555 aa26.16■■□□□ 1.78
CMTM3-205ENST00000562707 PIP4K2BP78356 416 aa26.15■■□□□ 1.78
CMTM3-205ENST00000562707 NEURL4Q96JN8 1562 aa26.14■■□□□ 1.78
CMTM3-205ENST00000562707 NPHP4O75161 1426 aaPredicted RBP26.14■■□□□ 1.77
CMTM3-205ENST00000562707 MAP3K1Q13233 1512 aa26.12■■□□□ 1.77
CMTM3-205ENST00000562707 MYOM3Q5VTT5 1437 aa26.12■■□□□ 1.77
CMTM3-205ENST00000562707 MAST1Q9Y2H9 1570 aa26.12■■□□□ 1.77
CMTM3-205ENST00000562707 ABCC3O15438 1527 aa26.09■■□□□ 1.77
CMTM3-205ENST00000562707 POLR1AO95602 1720 aaPredicted RBP26.09■■□□□ 1.77
CMTM3-205ENST00000562707 HSPA1LP34931 641 aa26.09■■□□□ 1.77
CMTM3-205ENST00000562707 MED14O60244 1454 aa26.09■■□□□ 1.77
CMTM3-205ENST00000562707 RNF17Q9BXT8 1623 aaKnown RBP26.07■■□□□ 1.76
CMTM3-205ENST00000562707 APLP2Q06481 763 aa26.07■■□□□ 1.76
CMTM3-205ENST00000562707 ERVK-7P63135 1459 aa26.05■■□□□ 1.76
CMTM3-205ENST00000562707 DEPDC5O75140 1603 aa26.03■■□□□ 1.76
CMTM3-205ENST00000562707 DUOX2Q9NRD8 1548 aa26.03■■□□□ 1.76
CMTM3-205ENST00000562707 VWDEQ8N2E2 1590 aa26.03■■□□□ 1.76
CMTM3-205ENST00000562707 EIF2AK4Q9P2K8 1649 aaKnown RBP26.03■■□□□ 1.76
CMTM3-205ENST00000562707 RRP7BPQ9NSQ0 103 aa26.02■■□□□ 1.76
CMTM3-205ENST00000562707 ZC3H13Q5T200 1668 aaKnown RBP26.02■■□□□ 1.76
CMTM3-205ENST00000562707 KIF15Q9NS87 1388 aa26.01■■□□□ 1.75
CMTM3-205ENST00000562707 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.99■■□□□ 1.75
CMTM3-205ENST00000562707 TXNDC2Q86VQ3 553 aa25.97■■□□□ 1.75
CMTM3-205ENST00000562707 ABCC5O15440 1437 aa25.97■■□□□ 1.75
CMTM3-205ENST00000562707 MROH1Q8NDA8 1641 aa25.96■■□□□ 1.75
CMTM3-205ENST00000562707 IQGAP1P46940 1657 aa25.95■■□□□ 1.74
CMTM3-205ENST00000562707 ARHGAP31Q2M1Z3 1444 aa25.95■■□□□ 1.74
CMTM3-205ENST00000562707 ERBINQ96RT1 1412 aa25.95■■□□□ 1.74
CMTM3-205ENST00000562707 EID1Q9Y6B2 187 aa25.94■■□□□ 1.74
CMTM3-205ENST00000562707 KANK1Q14678 1352 aa25.94■■□□□ 1.74
CMTM3-205ENST00000562707 SCAF11Q99590 1463 aaKnown RBP25.92■■□□□ 1.74
CMTM3-205ENST00000562707 LTKP29376 864 aa25.92■■□□□ 1.74
CMTM3-205ENST00000562707 STAG3Q9UJ98 1225 aa25.92■■□□□ 1.74
CMTM3-205ENST00000562707 LRRC7Q96NW7 1537 aa25.91■■□□□ 1.74
CMTM3-205ENST00000562707 DAPK1P53355 1430 aa25.89■■□□□ 1.74
CMTM3-205ENST00000562707 CHIC2Q9UKJ5 165 aa25.89■■□□□ 1.74
CMTM3-205ENST00000562707 CEP152O94986 1710 aa25.88■■□□□ 1.73
CMTM3-205ENST00000562707 PRDM15P57071 1507 aaPredicted RBP25.88■■□□□ 1.73
CMTM3-205ENST00000562707 ANKRD30AQ9BXX3 1397 aa25.87■■□□□ 1.73
CMTM3-205ENST00000562707 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
CMTM3-205ENST00000562707 PTPN23Q9H3S7 1636 aa25.87■■□□□ 1.73
CMTM3-205ENST00000562707 ARHGAP23Q9P227 1491 aa25.86■■□□□ 1.73
CMTM3-205ENST00000562707 PHF23Q9BUL5 403 aaPredicted RBP25.86■■□□□ 1.73
CMTM3-205ENST00000562707 FGD6Q6ZV73 1430 aa25.86■■□□□ 1.73
CMTM3-205ENST00000562707 MED1Q15648 1581 aaPredicted RBP25.86■■□□□ 1.73
CMTM3-205ENST00000562707 SLIT1O75093 1534 aa25.85■■□□□ 1.73
CMTM3-205ENST00000562707 UBR1Q8IWV7 1749 aa25.85■■□□□ 1.73
CMTM3-205ENST00000562707 ALKQ9UM73 1620 aa25.83■■□□□ 1.73
CMTM3-205ENST00000562707 TMEM2Q9UHN6 1383 aa25.82■■□□□ 1.72
CMTM3-205ENST00000562707 IDI1Q13907 227 aa25.81■■□□□ 1.72
CMTM3-205ENST00000562707 SYNMO15061 1565 aa25.81■■□□□ 1.72
CMTM3-205ENST00000562707 CROCC2H7BZ55 1655 aa25.79■■□□□ 1.72
CMTM3-205ENST00000562707 STRCP1A6NGW2 1772 aa25.79■■□□□ 1.72
CMTM3-205ENST00000562707 CFAP65Q6ZU64 1925 aaKnown RBP25.78■■□□□ 1.72
CMTM3-205ENST00000562707 LMTK2Q8IWU2 1503 aa25.75■■□□□ 1.71
CMTM3-205ENST00000562707 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
CMTM3-205ENST00000562707 PIK3C2BO00750 1634 aa25.74■■□□□ 1.71
CMTM3-205ENST00000562707 KCNA6P17658 529 aa25.73■■□□□ 1.71
CMTM3-205ENST00000562707 SLC52A1Q9NWF4 448 aa25.73■■□□□ 1.71
CMTM3-205ENST00000562707 EFCAB6Q5THR3 1501 aa25.73■■□□□ 1.71
CMTM3-205ENST00000562707 SLC26A8Q96RN1 970 aa25.72■■□□□ 1.71
CMTM3-205ENST00000562707 BCANQ96GW7 911 aa25.7■■□□□ 1.7
CMTM3-205ENST00000562707 NOS1P29475 1434 aa25.7■■□□□ 1.7
CMTM3-205ENST00000562707 PROSER2Q86WR7 435 aaPredicted RBP25.69■■□□□ 1.7
CMTM3-205ENST00000562707 TMEM94Q12767 1356 aa25.69■■□□□ 1.7
CMTM3-205ENST00000562707 ADGRL2O95490 1459 aa25.66■■□□□ 1.7
CMTM3-205ENST00000562707 FAM135BQ49AJ0 1406 aa25.65■■□□□ 1.7
CMTM3-205ENST00000562707 ANKRD50Q9ULJ7 1429 aa25.64■■□□□ 1.7
CMTM3-205ENST00000562707 HDGFP51858 240 aaKnown RBP25.64■■□□□ 1.7
CMTM3-205ENST00000562707 KDM5AP29375 1690 aaKnown RBP25.63■■□□□ 1.69
CMTM3-205ENST00000562707 RBM33Q96EV2 1170 aaKnown RBP25.62■■□□□ 1.69
CMTM3-205ENST00000562707 ADGRB3O60242 1522 aa25.6■■□□□ 1.69
CMTM3-205ENST00000562707 TET3O43151 1660 aa25.6■■□□□ 1.69
CMTM3-205ENST00000562707 RPRD2Q5VT52 1461 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms