RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 NPATQ14207 1427 aa17.3■□□□□ 0.36
LPCAT4-202ENST00000562404 MYO3AQ8NEV4 1616 aa17.3■□□□□ 0.36
LPCAT4-202ENST00000562404 EIF2AK4Q9P2K8 1649 aaKnown RBP17.3■□□□□ 0.36
LPCAT4-202ENST00000562404 PPP6R1Q9UPN7 881 aa17.29■□□□□ 0.36
LPCAT4-202ENST00000562404 KDM5DQ9BY66 1539 aa17.29■□□□□ 0.36
LPCAT4-202ENST00000562404 CEP152O94986 1710 aa17.27■□□□□ 0.36
LPCAT4-202ENST00000562404 DUOX2Q9NRD8 1548 aa17.27■□□□□ 0.36
LPCAT4-202ENST00000562404 ZNF142P52746 1687 aaPredicted RBP17.27■□□□□ 0.36
LPCAT4-202ENST00000562404 FBXO31Q5XUX0 539 aaPredicted RBP17.26■□□□□ 0.35
LPCAT4-202ENST00000562404 PPARGC1BQ86YN6 1023 aaKnown RBP17.26■□□□□ 0.35
LPCAT4-202ENST00000562404 KIF15Q9NS87 1388 aa17.26■□□□□ 0.35
LPCAT4-202ENST00000562404 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
LPCAT4-202ENST00000562404 RRP7BPQ9NSQ0 103 aa17.25■□□□□ 0.35
LPCAT4-202ENST00000562404 CHIC2Q9UKJ5 165 aa17.25■□□□□ 0.35
LPCAT4-202ENST00000562404 CFAP65Q6ZU64 1925 aaKnown RBP17.25■□□□□ 0.35
LPCAT4-202ENST00000562404 ILDR1Q86SU0 546 aaPredicted RBP17.24■□□□□ 0.35
LPCAT4-202ENST00000562404 ABCC3O15438 1527 aa17.24■□□□□ 0.35
LPCAT4-202ENST00000562404 PZPP20742 1482 aa17.24■□□□□ 0.35
LPCAT4-202ENST00000562404 CEP170BQ9Y4F5 1589 aaPredicted RBP17.23■□□□□ 0.35
LPCAT4-202ENST00000562404 WASHC2CQ9Y4E1 1318 aa17.23■□□□□ 0.35
LPCAT4-202ENST00000562404 CAMSAP1Q5T5Y3 1602 aa17.23■□□□□ 0.35
LPCAT4-202ENST00000562404 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
LPCAT4-202ENST00000562404 FAM50AQ14320 339 aaKnown RBP17.22■□□□□ 0.35
LPCAT4-202ENST00000562404 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
LPCAT4-202ENST00000562404 NCOA1Q15788 1441 aa17.21■□□□□ 0.34
LPCAT4-202ENST00000562404 PRDM15P57071 1507 aaPredicted RBP17.2■□□□□ 0.34
LPCAT4-202ENST00000562404 ERBINQ96RT1 1412 aa17.2■□□□□ 0.34
LPCAT4-202ENST00000562404 ADGRL2O95490 1459 aa17.19■□□□□ 0.34
LPCAT4-202ENST00000562404 TNRQ92752 1358 aa17.17■□□□□ 0.34
LPCAT4-202ENST00000562404 ANKRD30AQ9BXX3 1397 aa17.17■□□□□ 0.34
LPCAT4-202ENST00000562404 A2ML1A8K2U0 1454 aa17.17■□□□□ 0.34
LPCAT4-202ENST00000562404 SPATA31D1Q6ZQQ2 1576 aa17.15■□□□□ 0.34
LPCAT4-202ENST00000562404 NCKAP5LQ9HCH0 1330 aa17.15■□□□□ 0.34
LPCAT4-202ENST00000562404 PTPRTO14522 1441 aa17.14■□□□□ 0.33
LPCAT4-202ENST00000562404 VWDEQ8N2E2 1590 aa17.14■□□□□ 0.33
LPCAT4-202ENST00000562404 ERVK-7P63135 1459 aa17.13■□□□□ 0.33
LPCAT4-202ENST00000562404 PLA2R1Q13018 1463 aa17.13■□□□□ 0.33
LPCAT4-202ENST00000562404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
LPCAT4-202ENST00000562404 DMRT2Q9Y5R5 561 aa17.11■□□□□ 0.33
LPCAT4-202ENST00000562404 POLR1AO95602 1720 aaPredicted RBP17.1■□□□□ 0.33
LPCAT4-202ENST00000562404 ARHGAP31Q2M1Z3 1444 aa17.09■□□□□ 0.33
LPCAT4-202ENST00000562404 ANKRD50Q9ULJ7 1429 aa17.09■□□□□ 0.33
LPCAT4-202ENST00000562404 NLRP1Q9C000 1473 aa17.09■□□□□ 0.33
LPCAT4-202ENST00000562404 NEURL4Q96JN8 1562 aa17.09■□□□□ 0.33
LPCAT4-202ENST00000562404 LTBP4Q8N2S1 1624 aa17.08■□□□□ 0.32
LPCAT4-202ENST00000562404 UGGT1Q9NYU2 1555 aa17.08■□□□□ 0.32
LPCAT4-202ENST00000562404 LMTK2Q8IWU2 1503 aa17.08■□□□□ 0.32
LPCAT4-202ENST00000562404 CERKQ8TCT0 537 aa17.08■□□□□ 0.32
LPCAT4-202ENST00000562404 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
LPCAT4-202ENST00000562404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.07■□□□□ 0.32
LPCAT4-202ENST00000562404 FBXO41Q8TF61 875 aa17.07■□□□□ 0.32
LPCAT4-202ENST00000562404 ITGAEP38570 1179 aa17.06■□□□□ 0.32
LPCAT4-202ENST00000562404 PKD2Q13563 968 aa17.05■□□□□ 0.32
LPCAT4-202ENST00000562404 EFCAB6Q5THR3 1501 aa17.05■□□□□ 0.32
LPCAT4-202ENST00000562404 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
LPCAT4-202ENST00000562404 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
LPCAT4-202ENST00000562404 KANK1Q14678 1352 aa17.04■□□□□ 0.32
LPCAT4-202ENST00000562404 UNC13BO14795 1591 aa17.04■□□□□ 0.32
LPCAT4-202ENST00000562404 SYNMO15061 1565 aa17.03■□□□□ 0.32
LPCAT4-202ENST00000562404 PIK3C2BO00750 1634 aa17.03■□□□□ 0.32
LPCAT4-202ENST00000562404 ZNF335Q9H4Z2 1342 aaPredicted RBP17.02■□□□□ 0.32
LPCAT4-202ENST00000562404 TET3O43151 1660 aa17.01■□□□□ 0.31
LPCAT4-202ENST00000562404 THEMISQ8N1K5 641 aaPredicted RBP17■□□□□ 0.31
LPCAT4-202ENST00000562404 GCC2Q8IWJ2 1684 aa17■□□□□ 0.31
LPCAT4-202ENST00000562404 NOS1P29475 1434 aa16.99■□□□□ 0.31
LPCAT4-202ENST00000562404 E9PCH4 1651 aa16.98■□□□□ 0.31
LPCAT4-202ENST00000562404 IQGAP3Q86VI3 1631 aa16.97■□□□□ 0.31
LPCAT4-202ENST00000562404 MYO5BQ9ULV0 1848 aa16.97■□□□□ 0.31
LPCAT4-202ENST00000562404 MED14O60244 1454 aa16.97■□□□□ 0.31
LPCAT4-202ENST00000562404 IQGAP1P46940 1657 aa16.97■□□□□ 0.31
LPCAT4-202ENST00000562404 IDI1Q13907 227 aa16.96■□□□□ 0.31
LPCAT4-202ENST00000562404 ANKLE2Q86XL3 938 aa16.96■□□□□ 0.31
LPCAT4-202ENST00000562404 ARHGAP23Q9P227 1491 aa16.95■□□□□ 0.3
LPCAT4-202ENST00000562404 SLIT1O75093 1534 aa16.95■□□□□ 0.3
LPCAT4-202ENST00000562404 NPHP4O75161 1426 aaPredicted RBP16.95■□□□□ 0.3
LPCAT4-202ENST00000562404 STRCP1A6NGW2 1772 aa16.94■□□□□ 0.3
LPCAT4-202ENST00000562404 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
LPCAT4-202ENST00000562404 LTKP29376 864 aa16.93■□□□□ 0.3
LPCAT4-202ENST00000562404 RPRD2Q5VT52 1461 aaKnown RBP16.93■□□□□ 0.3
LPCAT4-202ENST00000562404 NAIPQ13075 1403 aa16.91■□□□□ 0.3
LPCAT4-202ENST00000562404 SCAF11Q99590 1463 aaKnown RBP16.91■□□□□ 0.3
LPCAT4-202ENST00000562404 ADGRB3O60242 1522 aa16.91■□□□□ 0.3
LPCAT4-202ENST00000562404 NUP155O75694 1391 aa16.9■□□□□ 0.3
LPCAT4-202ENST00000562404 IQSEC2Q5JU85 1478 aa16.89■□□□□ 0.29
LPCAT4-202ENST00000562404 TMEM2Q9UHN6 1383 aa16.89■□□□□ 0.29
LPCAT4-202ENST00000562404 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
LPCAT4-202ENST00000562404 TMEM131LA2VDJ0 1609 aa16.88■□□□□ 0.29
LPCAT4-202ENST00000562404 SLC52A1Q9NWF4 448 aa16.85■□□□□ 0.29
LPCAT4-202ENST00000562404 STAG3Q9UJ98 1225 aa16.85■□□□□ 0.29
LPCAT4-202ENST00000562404 CPS1P31327 1500 aa16.85■□□□□ 0.29
LPCAT4-202ENST00000562404 SPHKAPQ2M3C7 1700 aa16.84■□□□□ 0.29
LPCAT4-202ENST00000562404 HFM1A2PYH4 1435 aa16.84■□□□□ 0.29
LPCAT4-202ENST00000562404 ZFYVE9O95405 1425 aa16.82■□□□□ 0.28
LPCAT4-202ENST00000562404 XIRP1Q702N8 1843 aaKnown RBP16.82■□□□□ 0.28
LPCAT4-202ENST00000562404 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
LPCAT4-202ENST00000562404 ALKQ9UM73 1620 aa16.8■□□□□ 0.28
LPCAT4-202ENST00000562404 SENP3Q9H4L4 574 aaPredicted RBP16.79■□□□□ 0.28
LPCAT4-202ENST00000562404 LRRC7Q96NW7 1537 aa16.79■□□□□ 0.28
LPCAT4-202ENST00000562404 RIMS2Q9UQ26 1411 aa16.78■□□□□ 0.28
LPCAT4-202ENST00000562404 UBAP1LF5GYI3 381 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms