RNA–Protein interactions for RNA: ENST00000562226.5

LMF1-204, Transcript of lipase maturation factor 1, humanhuman

TSL 2

Gene LMF1, Length 1,088 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-204ENST00000562226 NCOA1Q15788 1441 aa32.18■■■□□ 2.74
LMF1-204ENST00000562226 MYO3AQ8NEV4 1616 aa32.18■■■□□ 2.74
LMF1-204ENST00000562226 CAMSAP1Q5T5Y3 1602 aa32.16■■■□□ 2.74
LMF1-204ENST00000562226 ZNF142P52746 1687 aaPredicted RBP32.14■■■□□ 2.74
LMF1-204ENST00000562226 CEP170BQ9Y4F5 1589 aaPredicted RBP32.13■■■□□ 2.73
LMF1-204ENST00000562226 PTPN23Q9H3S7 1636 aa32.11■■■□□ 2.73
LMF1-204ENST00000562226 PZPP20742 1482 aa32.1■■■□□ 2.73
LMF1-204ENST00000562226 EIF2AK4Q9P2K8 1649 aaKnown RBP32.08■■■□□ 2.73
LMF1-204ENST00000562226 FGD6Q6ZV73 1430 aa32.08■■■□□ 2.73
LMF1-204ENST00000562226 SHANK2Q9UPX8 1470 aa32.07■■■□□ 2.72
LMF1-204ENST00000562226 RNF17Q9BXT8 1623 aaKnown RBP32.07■■■□□ 2.72
LMF1-204ENST00000562226 TNRQ92752 1358 aa32.07■■■□□ 2.72
LMF1-204ENST00000562226 PLA2R1Q13018 1463 aa32.06■■■□□ 2.72
LMF1-204ENST00000562226 DUOX2Q9NRD8 1548 aa32.05■■■□□ 2.72
LMF1-204ENST00000562226 A2ML1A8K2U0 1454 aa32.05■■■□□ 2.72
LMF1-204ENST00000562226 FBXO31Q5XUX0 539 aaPredicted RBP32.05■■■□□ 2.72
LMF1-204ENST00000562226 ABCC5O15440 1437 aa32.05■■■□□ 2.72
LMF1-204ENST00000562226 PKD2Q13563 968 aa32.04■■■□□ 2.72
LMF1-204ENST00000562226 NCKAP5LQ9HCH0 1330 aa32.03■■■□□ 2.72
LMF1-204ENST00000562226 CROCC2H7BZ55 1655 aa32.03■■■□□ 2.72
LMF1-204ENST00000562226 TCOF1Q13428 1488 aaKnown RBP32.03■■■□□ 2.72
LMF1-204ENST00000562226 DAPK1P53355 1430 aa32.01■■■□□ 2.72
LMF1-204ENST00000562226 KIF15Q9NS87 1388 aa32.01■■■□□ 2.71
LMF1-204ENST00000562226 ZC3H13Q5T200 1668 aaKnown RBP32.01■■■□□ 2.71
LMF1-204ENST00000562226 DNMT1P26358 1616 aaKnown RBP31.99■■■□□ 2.71
LMF1-204ENST00000562226 RRP7BPQ9NSQ0 103 aa31.98■■■□□ 2.71
LMF1-204ENST00000562226 ABCC3O15438 1527 aa31.98■■■□□ 2.71
LMF1-204ENST00000562226 ERBINQ96RT1 1412 aa31.96■■■□□ 2.71
LMF1-204ENST00000562226 NLRP1Q9C000 1473 aa31.94■■■□□ 2.7
LMF1-204ENST00000562226 MROH1Q8NDA8 1641 aa31.93■■■□□ 2.7
LMF1-204ENST00000562226 ANKRD30AQ9BXX3 1397 aa31.92■■■□□ 2.7
LMF1-204ENST00000562226 LTBP4Q8N2S1 1624 aa31.9■■■□□ 2.7
LMF1-204ENST00000562226 CHIC2Q9UKJ5 165 aa31.89■■■□□ 2.7
LMF1-204ENST00000562226 THEMISQ8N1K5 641 aaPredicted RBP31.88■■■□□ 2.69
LMF1-204ENST00000562226 FAM50AQ14320 339 aaKnown RBP31.87■■■□□ 2.69
LMF1-204ENST00000562226 CEP152O94986 1710 aa31.86■■■□□ 2.69
LMF1-204ENST00000562226 SPATA31D1Q6ZQQ2 1576 aa31.85■■■□□ 2.69
LMF1-204ENST00000562226 UGGT1Q9NYU2 1555 aa31.85■■■□□ 2.69
LMF1-204ENST00000562226 PRDM15P57071 1507 aaPredicted RBP31.85■■■□□ 2.69
LMF1-204ENST00000562226 ERVK-7P63135 1459 aa31.84■■■□□ 2.69
LMF1-204ENST00000562226 KANK1Q14678 1352 aa31.83■■■□□ 2.69
LMF1-204ENST00000562226 ANKLE2Q86XL3 938 aa31.83■■■□□ 2.69
LMF1-204ENST00000562226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.83■■■□□ 2.69
LMF1-204ENST00000562226 IQSEC2Q5JU85 1478 aa31.83■■■□□ 2.69
LMF1-204ENST00000562226 ZNF335Q9H4Z2 1342 aaPredicted RBP31.82■■■□□ 2.68
LMF1-204ENST00000562226 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.81■■■□□ 2.68
LMF1-204ENST00000562226 POLR1AO95602 1720 aaPredicted RBP31.81■■■□□ 2.68
LMF1-204ENST00000562226 DEPDC5O75140 1603 aa31.78■■■□□ 2.68
LMF1-204ENST00000562226 ARHGAP31Q2M1Z3 1444 aa31.78■■■□□ 2.68
LMF1-204ENST00000562226 ADGRL2O95490 1459 aa31.77■■■□□ 2.68
LMF1-204ENST00000562226 NEURL4Q96JN8 1562 aa31.74■■■□□ 2.67
LMF1-204ENST00000562226 CFAP65Q6ZU64 1925 aaKnown RBP31.73■■■□□ 2.67
LMF1-204ENST00000562226 NPHP4O75161 1426 aaPredicted RBP31.68■■■□□ 2.66
LMF1-204ENST00000562226 MED14O60244 1454 aa31.67■■■□□ 2.66
LMF1-204ENST00000562226 LMTK2Q8IWU2 1503 aa31.67■■■□□ 2.66
LMF1-204ENST00000562226 ANKRD50Q9ULJ7 1429 aa31.66■■■□□ 2.66
LMF1-204ENST00000562226 VWDEQ8N2E2 1590 aa31.64■■■□□ 2.66
LMF1-204ENST00000562226 UBR1Q8IWV7 1749 aa31.63■■■□□ 2.65
LMF1-204ENST00000562226 CPS1P31327 1500 aa31.61■■■□□ 2.65
LMF1-204ENST00000562226 IQGAP1P46940 1657 aa31.6■■■□□ 2.65
LMF1-204ENST00000562226 UBAP1LF5GYI3 381 aa31.59■■■□□ 2.65
LMF1-204ENST00000562226 STAG3Q9UJ98 1225 aa31.59■■■□□ 2.65
LMF1-204ENST00000562226 EFCAB6Q5THR3 1501 aa31.57■■■□□ 2.64
LMF1-204ENST00000562226 PPARGC1BQ86YN6 1023 aaKnown RBP31.56■■■□□ 2.64
LMF1-204ENST00000562226 SCAF11Q99590 1463 aaKnown RBP31.56■■■□□ 2.64
LMF1-204ENST00000562226 ROCK1Q13464 1354 aa31.55■■■□□ 2.64
LMF1-204ENST00000562226 EID1Q9Y6B2 187 aa31.54■■■□□ 2.64
LMF1-204ENST00000562226 SLIT1O75093 1534 aa31.54■■■□□ 2.64
LMF1-204ENST00000562226 PIK3C2BO00750 1634 aa31.53■■■□□ 2.64
LMF1-204ENST00000562226 TXNDC2Q86VQ3 553 aa31.53■■■□□ 2.64
LMF1-204ENST00000562226 ARHGAP23Q9P227 1491 aa31.52■■■□□ 2.64
LMF1-204ENST00000562226 ITGAEP38570 1179 aa31.5■■■□□ 2.63
LMF1-204ENST00000562226 IDI1Q13907 227 aa31.5■■■□□ 2.63
LMF1-204ENST00000562226 RPRD2Q5VT52 1461 aaKnown RBP31.5■■■□□ 2.63
LMF1-204ENST00000562226 NOS1P29475 1434 aa31.49■■■□□ 2.63
LMF1-204ENST00000562226 KDM5AP29375 1690 aaKnown RBP31.48■■■□□ 2.63
LMF1-204ENST00000562226 SYNMO15061 1565 aa31.47■■■□□ 2.63
LMF1-204ENST00000562226 TMEM2Q9UHN6 1383 aa31.47■■■□□ 2.63
LMF1-204ENST00000562226 LTKP29376 864 aa31.47■■■□□ 2.63
LMF1-204ENST00000562226 SLC52A1Q9NWF4 448 aa31.47■■■□□ 2.63
LMF1-204ENST00000562226 TET3O43151 1660 aa31.45■■■□□ 2.63
LMF1-204ENST00000562226 UNC13BO14795 1591 aa31.45■■■□□ 2.63
LMF1-204ENST00000562226 TOM1O60784 492 aa31.44■■■□□ 2.62
LMF1-204ENST00000562226 ADGRB3O60242 1522 aa31.4■■■□□ 2.62
LMF1-204ENST00000562226 GCC2Q8IWJ2 1684 aa31.39■■■□□ 2.62
LMF1-204ENST00000562226 SCAF1Q9H7N4 1312 aaKnown RBP31.39■■■□□ 2.62
LMF1-204ENST00000562226 PIP4K2BP78356 416 aa31.35■■■□□ 2.61
LMF1-204ENST00000562226 LRRC7Q96NW7 1537 aa31.34■■■□□ 2.61
LMF1-204ENST00000562226 STRCP1A6NGW2 1772 aa31.33■■■□□ 2.61
LMF1-204ENST00000562226 NUP155O75694 1391 aa31.33■■■□□ 2.61
LMF1-204ENST00000562226 IQGAP3Q86VI3 1631 aa31.33■■■□□ 2.61
LMF1-204ENST00000562226 DISP3Q9P2K9 1392 aa31.32■■■□□ 2.6
LMF1-204ENST00000562226 RRBP1Q9P2E9 1410 aaKnown RBP31.31■■■□□ 2.6
LMF1-204ENST00000562226 HDGFP51858 240 aaKnown RBP31.28■■■□□ 2.6
LMF1-204ENST00000562226 E9PCH4 1651 aa31.28■■■□□ 2.6
LMF1-204ENST00000562226 BCANQ96GW7 911 aa31.27■■■□□ 2.6
LMF1-204ENST00000562226 CHGAP10645 457 aaKnown RBP31.25■■■□□ 2.59
LMF1-204ENST00000562226 PPP1R15AO75807 674 aaPredicted RBP31.23■■■□□ 2.59
LMF1-204ENST00000562226 SLC26A8Q96RN1 970 aa31.23■■■□□ 2.59
LMF1-204ENST00000562226 TMEM131LA2VDJ0 1609 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms