RNA–Protein interactions for RNA: ENST00000562226.5

LMF1-204, Transcript of lipase maturation factor 1, humanhuman

TSL 2

Gene LMF1, Length 1,088 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-204ENST00000562226 NISCHQ9Y2I1 1504 aa50.93■■■■■ 5.74
LMF1-204ENST00000562226 CCDC180Q9P1Z9 1646 aa45.57■■■■■ 4.89
LMF1-204ENST00000562226 ABCC9O60706 1549 aa45.22■■■■■ 4.83
LMF1-204ENST00000562226 RB1CC1Q8TDY2 1594 aa43.24■■■■■ 4.51
LMF1-204ENST00000562226 NACADO15069 1562 aa43.03■■■■■ 4.48
LMF1-204ENST00000562226 DCAF8L2P0C7V8 631 aa42.91■■■■■ 4.46
LMF1-204ENST00000562226 MYO15BQ96JP2 1530 aa42.54■■■■■ 4.4
LMF1-204ENST00000562226 ZCCHC6Q5VYS8 1495 aaKnown RBP42.28■■■■■ 4.36
LMF1-204ENST00000562226 UNC13AQ9UPW8 1703 aa42.15■■■■■ 4.34
LMF1-204ENST00000562226 PABPN1Q86U42 306 aaKnown RBP eCLIP42.15■■■■■ 4.34
LMF1-204ENST00000562226 DCAF1Q9Y4B6 1507 aa42.11■■■■■ 4.33
LMF1-204ENST00000562226 DNAJC5BQ9UF47 199 aa42.03■■■■■ 4.32
LMF1-204ENST00000562226 BICRAQ9NZM4 1560 aa41.87■■■■■ 4.29
LMF1-204ENST00000562226 SCRIBQ14160 1630 aa41.53■■■■■ 4.24
LMF1-204ENST00000562226 SHROOM4Q9ULL8 1493 aa41.47■■■■■ 4.23
LMF1-204ENST00000562226 EIF4G1Q04637 1599 aaKnown RBP40.86■■■■■ 4.13
LMF1-204ENST00000562226 CC2D2AQ9P2K1 1620 aa40.85■■■■■ 4.13
LMF1-204ENST00000562226 CECR2Q9BXF3 1484 aa40.72■■■■■ 4.11
LMF1-204ENST00000562226 NCAPD3P42695 1498 aa39.69■■■■□ 3.94
LMF1-204ENST00000562226 SMARCA4P51532 1647 aa39.65■■■■□ 3.94
LMF1-204ENST00000562226 ATAD2BQ9ULI0 1458 aa39.61■■■■□ 3.93
LMF1-204ENST00000562226 SMARCA2P51531 1590 aa39.56■■■■□ 3.92
LMF1-204ENST00000562226 BAZ1AQ9NRL2 1556 aaPredicted RBP39.55■■■■□ 3.92
LMF1-204ENST00000562226 HMGXB3Q12766 1538 aa39.44■■■■□ 3.9
LMF1-204ENST00000562226 BAZ1BQ9UIG0 1483 aaKnown RBP39.29■■■■□ 3.88
LMF1-204ENST00000562226 PEG3Q9GZU2 1588 aa39.26■■■■□ 3.88
LMF1-204ENST00000562226 MROH2BQ7Z745 1585 aa39.21■■■■□ 3.87
LMF1-204ENST00000562226 ERCC6Q03468 1493 aa39.09■■■■□ 3.85
LMF1-204ENST00000562226 NESP48681 1621 aa38.91■■■■□ 3.82
LMF1-204ENST00000562226 CUX2O14529 1486 aa38.88■■■■□ 3.81
LMF1-204ENST00000562226 LAMC3Q9Y6N6 1575 aa38.77■■■■□ 3.8
LMF1-204ENST00000562226 WIZO95785 1651 aa38.76■■■■□ 3.8
LMF1-204ENST00000562226 PDS5BQ9NTI5 1447 aa38.56■■■■□ 3.76
LMF1-204ENST00000562226 RSF1Q96T23 1441 aaPredicted RBP38.55■■■■□ 3.76
LMF1-204ENST00000562226 CADPSQ9ULU8 1353 aa38.52■■■■□ 3.76
LMF1-204ENST00000562226 THOC2Q8NI27 1593 aaKnown RBP38.46■■■■□ 3.75
LMF1-204ENST00000562226 DNAJC5Q9H3Z4 198 aa38.43■■■■□ 3.74
LMF1-204ENST00000562226 KIF21AQ7Z4S6 1674 aa38.43■■■■□ 3.74
LMF1-204ENST00000562226 TOP2AP11388 1531 aaKnown RBP38.34■■■■□ 3.73
LMF1-204ENST00000562226 MRC2Q9UBG0 1479 aa38.17■■■■□ 3.7
LMF1-204ENST00000562226 CFTRP13569 1480 aa38.13■■■■□ 3.69
LMF1-204ENST00000562226 CEP164Q9UPV0 1460 aa38.1■■■■□ 3.69
LMF1-204ENST00000562226 FANCD2Q9BXW9 1451 aa38.08■■■■□ 3.69
LMF1-204ENST00000562226 WDR62O43379 1518 aa38.04■■■■□ 3.68
LMF1-204ENST00000562226 CCDC88BA6NC98 1476 aa37.89■■■■□ 3.66
LMF1-204ENST00000562226 PRDM2Q13029 1718 aa37.77■■■■□ 3.64
LMF1-204ENST00000562226 URB2Q14146 1524 aaKnown RBP37.7■■■■□ 3.63
LMF1-204ENST00000562226 ABCC8Q09428 1581 aa37.4■■■■□ 3.58
LMF1-204ENST00000562226 TOPBP1Q92547 1522 aa37.38■■■■□ 3.57
LMF1-204ENST00000562226 IFT140Q96RY7 1462 aa37.33■■■■□ 3.57
LMF1-204ENST00000562226 DNMBPQ6XZF7 1577 aa37.29■■■■□ 3.56
LMF1-204ENST00000562226 OSCARQ8IYS5 282 aa37.18■■■■□ 3.54
LMF1-204ENST00000562226 ZNF608Q9ULD9 1512 aaPredicted RBP37.17■■■■□ 3.54
LMF1-204ENST00000562226 SUPT5HO00267 1087 aaKnown RBP37.16■■■■□ 3.54
LMF1-204ENST00000562226 POLA1P09884 1462 aaPredicted RBP37.01■■■■□ 3.52
LMF1-204ENST00000562226 EIF4G3O43432 1585 aaKnown RBP37.01■■■■□ 3.52
LMF1-204ENST00000562226 TARBP1Q13395 1621 aaKnown RBP36.99■■■■□ 3.51
LMF1-204ENST00000562226 TRIM41Q8WV44 630 aa36.93■■■■□ 3.5
LMF1-204ENST00000562226 AQRO60306 1485 aaKnown RBP eCLIP36.9■■■■□ 3.5
LMF1-204ENST00000562226 SOGA1O94964 1423 aa36.89■■■■□ 3.5
LMF1-204ENST00000562226 RAD54L2Q9Y4B4 1467 aa36.86■■■■□ 3.49
LMF1-204ENST00000562226 FGD5Q6ZNL6 1462 aa36.84■■■■□ 3.49
LMF1-204ENST00000562226 CUX1P39880 1505 aa36.83■■■■□ 3.49
LMF1-204ENST00000562226 TDRD9Q8NDG6 1382 aaKnown RBP36.75■■■■□ 3.47
LMF1-204ENST00000562226 WDR97A6NE52 1622 aa36.72■■■■□ 3.47
LMF1-204ENST00000562226 FBLN2P98095 1184 aa36.67■■■■□ 3.46
LMF1-204ENST00000562226 CHD1O14646 1710 aa36.65■■■■□ 3.46
LMF1-204ENST00000562226 RIMBP3CA6NJZ7 1639 aa36.59■■■■□ 3.45
LMF1-204ENST00000562226 RIMBP3BA6NNM3 1639 aa36.59■■■■□ 3.45
LMF1-204ENST00000562226 RIMBP3Q9UFD9 1639 aa36.59■■■■□ 3.45
LMF1-204ENST00000562226 SNAPC4Q5SXM2 1469 aa36.56■■■■□ 3.44
LMF1-204ENST00000562226 GRIN2BQ13224 1484 aa36.53■■■■□ 3.44
LMF1-204ENST00000562226 ARHGEF11O15085 1522 aa36.53■■■■□ 3.44
LMF1-204ENST00000562226 MAGI1Q96QZ7 1491 aaPredicted RBP36.5■■■■□ 3.43
LMF1-204ENST00000562226 CHMP7Q8WUX9 453 aaPredicted RBP36.46■■■■□ 3.43
LMF1-204ENST00000562226 ABCA10Q8WWZ4 1543 aa36.45■■■■□ 3.43
LMF1-204ENST00000562226 GAPVD1Q14C86 1478 aa36.43■■■■□ 3.42
LMF1-204ENST00000562226 WRNQ14191 1432 aaPredicted RBP eCLIP36.41■■■■□ 3.423e-6■■■■■ 66.3
LMF1-204ENST00000562226 SYNJ2O15056 1496 aa36.37■■■■□ 3.41
LMF1-204ENST00000562226 PBRM1Q86U86 1689 aa36.37■■■■□ 3.41
LMF1-204ENST00000562226 TOP2BQ02880 1626 aa36.37■■■■□ 3.41
LMF1-204ENST00000562226 BIVM-ERCC5R4GMW8 1640 aa36.35■■■■□ 3.41
LMF1-204ENST00000562226 ABCA5Q8WWZ7 1642 aa36.34■■■■□ 3.41
LMF1-204ENST00000562226 SYNJ1O43426 1573 aa36.32■■■■□ 3.41
LMF1-204ENST00000562226 CYB5RLQ6IPT4 315 aa36.27■■■■□ 3.4
LMF1-204ENST00000562226 CLASP1Q7Z460 1538 aa36.25■■■■□ 3.39
LMF1-204ENST00000562226 ARAP1Q96P48 1450 aa36.18■■■■□ 3.38
LMF1-204ENST00000562226 ADAMTS12P58397 1594 aa36.06■■■■□ 3.36
LMF1-204ENST00000562226 GRIN2AQ12879 1464 aa36.05■■■■□ 3.36
LMF1-204ENST00000562226 ERICH3Q5RHP9 1530 aa36.02■■■■□ 3.36
LMF1-204ENST00000562226 FHAD1B1AJZ9 1412 aa36■■■■□ 3.35
LMF1-204ENST00000562226 NUP160Q12769 1436 aa35.9■■■■□ 3.34
LMF1-204ENST00000562226 CEP170Q5SW79 1584 aa35.86■■■■□ 3.33
LMF1-204ENST00000562226 TRHP20396 242 aaPredicted RBP35.8■■■■□ 3.32
LMF1-204ENST00000562226 KIF27Q86VH2 1401 aa35.72■■■■□ 3.31
LMF1-204ENST00000562226 SHROOM2Q13796 1616 aa35.68■■■■□ 3.3
LMF1-204ENST00000562226 ERCC6L2Q5T890 1561 aa35.67■■■■□ 3.3
LMF1-204ENST00000562226 IGF1RP08069 1367 aa35.61■■■■□ 3.29
LMF1-204ENST00000562226 CUL7Q14999 1698 aa35.57■■■■□ 3.28
LMF1-204ENST00000562226 JPH4Q96JJ6 628 aa35.57■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms