RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 NCOA1Q15788 1441 aa36.72■■■■□ 3.47
TMEM170A-202ENST00000561878 CAMSAP1Q5T5Y3 1602 aa36.7■■■■□ 3.47
TMEM170A-202ENST00000561878 CERKQ8TCT0 537 aa36.69■■■■□ 3.46
TMEM170A-202ENST00000561878 CEP170BQ9Y4F5 1589 aaPredicted RBP36.69■■■■□ 3.46
TMEM170A-202ENST00000561878 PTPN23Q9H3S7 1636 aa36.67■■■■□ 3.46
TMEM170A-202ENST00000561878 WASHC2CQ9Y4E1 1318 aa36.67■■■■□ 3.46
TMEM170A-202ENST00000561878 EIF2AK4Q9P2K8 1649 aaKnown RBP36.66■■■■□ 3.46
TMEM170A-202ENST00000561878 RNF17Q9BXT8 1623 aaKnown RBP36.64■■■■□ 3.46
TMEM170A-202ENST00000561878 PZPP20742 1482 aa36.63■■■■□ 3.45
TMEM170A-202ENST00000561878 CROCC2H7BZ55 1655 aa36.62■■■■□ 3.45
TMEM170A-202ENST00000561878 SHANK2Q9UPX8 1470 aa36.61■■■■□ 3.45
TMEM170A-202ENST00000561878 PLA2R1Q13018 1463 aa36.6■■■■□ 3.45
TMEM170A-202ENST00000561878 FGD6Q6ZV73 1430 aa36.59■■■■□ 3.45
TMEM170A-202ENST00000561878 DUOX2Q9NRD8 1548 aa36.59■■■■□ 3.45
TMEM170A-202ENST00000561878 A2ML1A8K2U0 1454 aa36.58■■■■□ 3.45
TMEM170A-202ENST00000561878 ZC3H13Q5T200 1668 aaKnown RBP36.58■■■■□ 3.45
TMEM170A-202ENST00000561878 TNRQ92752 1358 aa36.56■■■■□ 3.44
TMEM170A-202ENST00000561878 ABCC5O15440 1437 aa36.56■■■■□ 3.44
TMEM170A-202ENST00000561878 TCOF1Q13428 1488 aaKnown RBP36.56■■■■□ 3.44
TMEM170A-202ENST00000561878 DNMT1P26358 1616 aaKnown RBP36.54■■■■□ 3.44
TMEM170A-202ENST00000561878 PKD2Q13563 968 aa36.53■■■■□ 3.44
TMEM170A-202ENST00000561878 DAPK1P53355 1430 aa36.52■■■■□ 3.44
TMEM170A-202ENST00000561878 FBXO31Q5XUX0 539 aaPredicted RBP36.52■■■■□ 3.44
TMEM170A-202ENST00000561878 ABCC3O15438 1527 aa36.5■■■■□ 3.43
TMEM170A-202ENST00000561878 NCKAP5LQ9HCH0 1330 aa36.5■■■■□ 3.43
TMEM170A-202ENST00000561878 KIF15Q9NS87 1388 aa36.5■■■■□ 3.43
TMEM170A-202ENST00000561878 ERBINQ96RT1 1412 aa36.47■■■■□ 3.43
TMEM170A-202ENST00000561878 MROH1Q8NDA8 1641 aa36.47■■■■□ 3.43
TMEM170A-202ENST00000561878 NLRP1Q9C000 1473 aa36.44■■■■□ 3.42
TMEM170A-202ENST00000561878 RRP7BPQ9NSQ0 103 aa36.43■■■■□ 3.42
TMEM170A-202ENST00000561878 LTBP4Q8N2S1 1624 aa36.42■■■■□ 3.42
TMEM170A-202ENST00000561878 CEP152O94986 1710 aa36.42■■■■□ 3.42
TMEM170A-202ENST00000561878 ANKRD30AQ9BXX3 1397 aa36.39■■■■□ 3.42
TMEM170A-202ENST00000561878 PRDM15P57071 1507 aaPredicted RBP36.39■■■■□ 3.42
TMEM170A-202ENST00000561878 SPATA31D1Q6ZQQ2 1576 aa36.38■■■■□ 3.41
TMEM170A-202ENST00000561878 POLR1AO95602 1720 aaPredicted RBP36.37■■■■□ 3.41
TMEM170A-202ENST00000561878 UGGT1Q9NYU2 1555 aa36.35■■■■□ 3.41
TMEM170A-202ENST00000561878 ERVK-7P63135 1459 aa36.34■■■■□ 3.41
TMEM170A-202ENST00000561878 IQSEC2Q5JU85 1478 aa36.34■■■■□ 3.41
TMEM170A-202ENST00000561878 THEMISQ8N1K5 641 aaPredicted RBP36.33■■■■□ 3.41
TMEM170A-202ENST00000561878 CHIC2Q9UKJ5 165 aa36.32■■■■□ 3.4
TMEM170A-202ENST00000561878 DEPDC5O75140 1603 aa36.32■■■■□ 3.4
TMEM170A-202ENST00000561878 FAM50AQ14320 339 aaKnown RBP36.3■■■■□ 3.4
TMEM170A-202ENST00000561878 KANK1Q14678 1352 aa36.28■■■■□ 3.4
TMEM170A-202ENST00000561878 ZNF335Q9H4Z2 1342 aaPredicted RBP36.28■■■■□ 3.4
TMEM170A-202ENST00000561878 ADGRL2O95490 1459 aa36.27■■■■□ 3.4
TMEM170A-202ENST00000561878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.27■■■■□ 3.4
TMEM170A-202ENST00000561878 ARHGAP31Q2M1Z3 1444 aa36.26■■■■□ 3.4
TMEM170A-202ENST00000561878 ANKLE2Q86XL3 938 aa36.26■■■■□ 3.4
TMEM170A-202ENST00000561878 NEURL4Q96JN8 1562 aa36.26■■■■□ 3.39
TMEM170A-202ENST00000561878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.25■■■■□ 3.39
TMEM170A-202ENST00000561878 CFAP65Q6ZU64 1925 aaKnown RBP36.24■■■■□ 3.39
TMEM170A-202ENST00000561878 LMTK2Q8IWU2 1503 aa36.16■■■■□ 3.38
TMEM170A-202ENST00000561878 MED14O60244 1454 aa36.15■■■■□ 3.38
TMEM170A-202ENST00000561878 VWDEQ8N2E2 1590 aa36.15■■■■□ 3.38
TMEM170A-202ENST00000561878 UBR1Q8IWV7 1749 aa36.14■■■■□ 3.38
TMEM170A-202ENST00000561878 NPHP4O75161 1426 aaPredicted RBP36.13■■■■□ 3.37
TMEM170A-202ENST00000561878 ANKRD50Q9ULJ7 1429 aa36.1■■■■□ 3.37
TMEM170A-202ENST00000561878 IQGAP1P46940 1657 aa36.1■■■■□ 3.37
TMEM170A-202ENST00000561878 CPS1P31327 1500 aa36.08■■■■□ 3.37
TMEM170A-202ENST00000561878 EFCAB6Q5THR3 1501 aa36.05■■■■□ 3.36
TMEM170A-202ENST00000561878 PIK3C2BO00750 1634 aa36.01■■■■□ 3.36
TMEM170A-202ENST00000561878 SCAF11Q99590 1463 aaKnown RBP36■■■■□ 3.35
TMEM170A-202ENST00000561878 SLIT1O75093 1534 aa36■■■■□ 3.35
TMEM170A-202ENST00000561878 UBAP1LF5GYI3 381 aa35.99■■■■□ 3.35
TMEM170A-202ENST00000561878 ROCK1Q13464 1354 aa35.99■■■■□ 3.35
TMEM170A-202ENST00000561878 ARHGAP23Q9P227 1491 aa35.99■■■■□ 3.35
TMEM170A-202ENST00000561878 KDM5AP29375 1690 aaKnown RBP35.97■■■■□ 3.35
TMEM170A-202ENST00000561878 STAG3Q9UJ98 1225 aa35.97■■■■□ 3.35
TMEM170A-202ENST00000561878 SYNMO15061 1565 aa35.94■■■■□ 3.34
TMEM170A-202ENST00000561878 RPRD2Q5VT52 1461 aaKnown RBP35.94■■■■□ 3.34
TMEM170A-202ENST00000561878 NOS1P29475 1434 aa35.94■■■■□ 3.34
TMEM170A-202ENST00000561878 UNC13BO14795 1591 aa35.93■■■■□ 3.34
TMEM170A-202ENST00000561878 PPARGC1BQ86YN6 1023 aaKnown RBP35.93■■■■□ 3.34
TMEM170A-202ENST00000561878 EID1Q9Y6B2 187 aa35.93■■■■□ 3.34
TMEM170A-202ENST00000561878 TET3O43151 1660 aa35.93■■■■□ 3.34
TMEM170A-202ENST00000561878 TXNDC2Q86VQ3 553 aa35.92■■■■□ 3.34
TMEM170A-202ENST00000561878 IDI1Q13907 227 aa35.89■■■■□ 3.34
TMEM170A-202ENST00000561878 TMEM2Q9UHN6 1383 aa35.89■■■■□ 3.34
TMEM170A-202ENST00000561878 GCC2Q8IWJ2 1684 aa35.88■■■■□ 3.33
TMEM170A-202ENST00000561878 LTKP29376 864 aa35.88■■■■□ 3.33
TMEM170A-202ENST00000561878 SLC52A1Q9NWF4 448 aa35.86■■■■□ 3.33
TMEM170A-202ENST00000561878 ADGRB3O60242 1522 aa35.85■■■■□ 3.33
TMEM170A-202ENST00000561878 ITGAEP38570 1179 aa35.85■■■■□ 3.33
TMEM170A-202ENST00000561878 TOM1O60784 492 aa35.82■■■■□ 3.32
TMEM170A-202ENST00000561878 STRCP1A6NGW2 1772 aa35.81■■■■□ 3.32
TMEM170A-202ENST00000561878 IQGAP3Q86VI3 1631 aa35.79■■■■□ 3.32
TMEM170A-202ENST00000561878 LRRC7Q96NW7 1537 aa35.75■■■■□ 3.31
TMEM170A-202ENST00000561878 SCAF1Q9H7N4 1312 aaKnown RBP35.74■■■■□ 3.31
TMEM170A-202ENST00000561878 E9PCH4 1651 aa35.74■■■■□ 3.31
TMEM170A-202ENST00000561878 RRBP1Q9P2E9 1410 aaKnown RBP35.73■■■■□ 3.31
TMEM170A-202ENST00000561878 NUP155O75694 1391 aa35.71■■■■□ 3.31
TMEM170A-202ENST00000561878 PIP4K2BP78356 416 aa35.7■■■■□ 3.31
TMEM170A-202ENST00000561878 DISP3Q9P2K9 1392 aa35.69■■■■□ 3.3
TMEM170A-202ENST00000561878 MYO5BQ9ULV0 1848 aa35.67■■■■□ 3.3
TMEM170A-202ENST00000561878 TMEM131LA2VDJ0 1609 aa35.65■■■■□ 3.3
TMEM170A-202ENST00000561878 HDGFP51858 240 aaKnown RBP35.63■■■■□ 3.29
TMEM170A-202ENST00000561878 ZFYVE9O95405 1425 aa35.6■■■■□ 3.29
TMEM170A-202ENST00000561878 ALKQ9UM73 1620 aa35.6■■■■□ 3.29
TMEM170A-202ENST00000561878 RIMS2Q9UQ26 1411 aa35.58■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms