RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 NPATQ14207 1427 aa17.68■□□□□ 0.42
GABPB1-210ENST00000560825 KIF3BO15066 747 aa17.67■□□□□ 0.42
GABPB1-210ENST00000560825 CEP152O94986 1710 aa17.67■□□□□ 0.42
GABPB1-210ENST00000560825 CEP170BQ9Y4F5 1589 aaPredicted RBP17.67■□□□□ 0.42
GABPB1-210ENST00000560825 MIA2Q96PC5 1412 aa17.66■□□□□ 0.42
GABPB1-210ENST00000560825 KDM5DQ9BY66 1539 aa17.65■□□□□ 0.42
GABPB1-210ENST00000560825 NCOA1Q15788 1441 aa17.64■□□□□ 0.42
GABPB1-210ENST00000560825 FBXO31Q5XUX0 539 aaPredicted RBP17.64■□□□□ 0.42
GABPB1-210ENST00000560825 CFAP65Q6ZU64 1925 aaKnown RBP17.64■□□□□ 0.41
GABPB1-210ENST00000560825 ABCC5O15440 1437 aa17.64■□□□□ 0.41
GABPB1-210ENST00000560825 DNMT1P26358 1616 aaKnown RBP17.63■□□□□ 0.41
GABPB1-210ENST00000560825 EIF2AK4Q9P2K8 1649 aaKnown RBP17.63■□□□□ 0.41
GABPB1-210ENST00000560825 FBXO41Q8TF61 875 aa17.62■□□□□ 0.41
GABPB1-210ENST00000560825 FGD6Q6ZV73 1430 aa17.61■□□□□ 0.41
GABPB1-210ENST00000560825 TCOF1Q13428 1488 aaKnown RBP17.61■□□□□ 0.41
GABPB1-210ENST00000560825 RSPH4AQ5TD94 716 aa17.61■□□□□ 0.41
GABPB1-210ENST00000560825 ABCC3O15438 1527 aa17.6■□□□□ 0.41
GABPB1-210ENST00000560825 TSPY4P0CV99 314 aa17.6■□□□□ 0.41
GABPB1-210ENST00000560825 TSPY10P0CW01 314 aa17.6■□□□□ 0.41
GABPB1-210ENST00000560825 NCKAP5LQ9HCH0 1330 aa17.6■□□□□ 0.41
GABPB1-210ENST00000560825 PZPP20742 1482 aa17.6■□□□□ 0.41
GABPB1-210ENST00000560825 LTBP4Q8N2S1 1624 aa17.59■□□□□ 0.41
GABPB1-210ENST00000560825 DAPK1P53355 1430 aa17.59■□□□□ 0.41
GABPB1-210ENST00000560825 ZC3H13Q5T200 1668 aaKnown RBP17.58■□□□□ 0.4
GABPB1-210ENST00000560825 CERKQ8TCT0 537 aa17.57■□□□□ 0.4
GABPB1-210ENST00000560825 POLR1AO95602 1720 aaPredicted RBP17.57■□□□□ 0.4
GABPB1-210ENST00000560825 DUOX2Q9NRD8 1548 aa17.56■□□□□ 0.4
GABPB1-210ENST00000560825 SHANK2Q9UPX8 1470 aa17.56■□□□□ 0.4
GABPB1-210ENST00000560825 PTPRTO14522 1441 aa17.56■□□□□ 0.4
GABPB1-210ENST00000560825 NEURL4Q96JN8 1562 aa17.56■□□□□ 0.4
GABPB1-210ENST00000560825 A2ML1A8K2U0 1454 aa17.56■□□□□ 0.4
GABPB1-210ENST00000560825 WASHC2CQ9Y4E1 1318 aa17.56■□□□□ 0.4
GABPB1-210ENST00000560825 DEPDC5O75140 1603 aa17.55■□□□□ 0.4
GABPB1-210ENST00000560825 FAM135AQ9P2D6 1515 aa17.55■□□□□ 0.4
GABPB1-210ENST00000560825 APLP2Q06481 763 aa17.55■□□□□ 0.4
GABPB1-210ENST00000560825 RRP7BPQ9NSQ0 103 aa17.54■□□□□ 0.4
GABPB1-210ENST00000560825 TNRQ92752 1358 aa17.53■□□□□ 0.4
GABPB1-210ENST00000560825 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
GABPB1-210ENST00000560825 CHIC2Q9UKJ5 165 aa17.53■□□□□ 0.4
GABPB1-210ENST00000560825 PRDM15P57071 1507 aaPredicted RBP17.53■□□□□ 0.4
GABPB1-210ENST00000560825 SPATA31D1Q6ZQQ2 1576 aa17.52■□□□□ 0.4
GABPB1-210ENST00000560825 PLA2R1Q13018 1463 aa17.52■□□□□ 0.39
GABPB1-210ENST00000560825 PPARGC1BQ86YN6 1023 aaKnown RBP17.51■□□□□ 0.39
GABPB1-210ENST00000560825 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
GABPB1-210ENST00000560825 ERVK-7P63135 1459 aa17.49■□□□□ 0.39
GABPB1-210ENST00000560825 ZNF335Q9H4Z2 1342 aaPredicted RBP17.49■□□□□ 0.39
GABPB1-210ENST00000560825 UBR1Q8IWV7 1749 aa17.49■□□□□ 0.39
GABPB1-210ENST00000560825 ERBINQ96RT1 1412 aa17.48■□□□□ 0.39
GABPB1-210ENST00000560825 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.46■□□□□ 0.393e-6■■□□□ 12.8
GABPB1-210ENST00000560825 UGGT1Q9NYU2 1555 aa17.46■□□□□ 0.39
GABPB1-210ENST00000560825 VWDEQ8N2E2 1590 aa17.46■□□□□ 0.38
GABPB1-210ENST00000560825 STRCP1A6NGW2 1772 aa17.45■□□□□ 0.38
GABPB1-210ENST00000560825 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
GABPB1-210ENST00000560825 NLRP1Q9C000 1473 aa17.43■□□□□ 0.38
GABPB1-210ENST00000560825 PIK3C2BO00750 1634 aa17.43■□□□□ 0.38
GABPB1-210ENST00000560825 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
GABPB1-210ENST00000560825 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.38
GABPB1-210ENST00000560825 SYNMO15061 1565 aa17.41■□□□□ 0.38
GABPB1-210ENST00000560825 IQGAP1P46940 1657 aa17.41■□□□□ 0.38
GABPB1-210ENST00000560825 PKD2Q13563 968 aa17.4■□□□□ 0.38
GABPB1-210ENST00000560825 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
GABPB1-210ENST00000560825 MYO5BQ9ULV0 1848 aa17.38■□□□□ 0.37
GABPB1-210ENST00000560825 EFCAB6Q5THR3 1501 aa17.38■□□□□ 0.37
GABPB1-210ENST00000560825 LMTK2Q8IWU2 1503 aa17.38■□□□□ 0.37
GABPB1-210ENST00000560825 ARHGAP31Q2M1Z3 1444 aa17.37■□□□□ 0.37
GABPB1-210ENST00000560825 MED14O60244 1454 aa17.36■□□□□ 0.37
GABPB1-210ENST00000560825 UNC13BO14795 1591 aa17.35■□□□□ 0.37
GABPB1-210ENST00000560825 E9PCH4 1651 aa17.33■□□□□ 0.37
GABPB1-210ENST00000560825 NPHP4O75161 1426 aaPredicted RBP17.33■□□□□ 0.37
GABPB1-210ENST00000560825 ANKRD50Q9ULJ7 1429 aa17.33■□□□□ 0.37
GABPB1-210ENST00000560825 ALKQ9UM73 1620 aa17.33■□□□□ 0.36
GABPB1-210ENST00000560825 IQSEC2Q5JU85 1478 aa17.32■□□□□ 0.36
GABPB1-210ENST00000560825 THEMISQ8N1K5 641 aaPredicted RBP17.32■□□□□ 0.36
GABPB1-210ENST00000560825 TET3O43151 1660 aa17.32■□□□□ 0.36
GABPB1-210ENST00000560825 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
GABPB1-210ENST00000560825 ARHGAP23Q9P227 1491 aa17.32■□□□□ 0.36
GABPB1-210ENST00000560825 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
GABPB1-210ENST00000560825 LTKP29376 864 aa17.31■□□□□ 0.36
GABPB1-210ENST00000560825 ANKLE2Q86XL3 938 aa17.31■□□□□ 0.36
GABPB1-210ENST00000560825 SLIT1O75093 1534 aa17.31■□□□□ 0.36
GABPB1-210ENST00000560825 ITGAEP38570 1179 aa17.3■□□□□ 0.36
GABPB1-210ENST00000560825 NOS1P29475 1434 aa17.29■□□□□ 0.36
GABPB1-210ENST00000560825 KDM5AP29375 1690 aaKnown RBP17.29■□□□□ 0.36
GABPB1-210ENST00000560825 KANK1Q14678 1352 aa17.28■□□□□ 0.36
GABPB1-210ENST00000560825 IQGAP3Q86VI3 1631 aa17.28■□□□□ 0.36
GABPB1-210ENST00000560825 SCAF11Q99590 1463 aaKnown RBP17.27■□□□□ 0.36
GABPB1-210ENST00000560825 IDI1Q13907 227 aa17.27■□□□□ 0.35
GABPB1-210ENST00000560825 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
GABPB1-210ENST00000560825 CPS1P31327 1500 aa17.25■□□□□ 0.35
GABPB1-210ENST00000560825 ROCK1Q13464 1354 aa17.24■□□□□ 0.35
GABPB1-210ENST00000560825 TMEM131LA2VDJ0 1609 aa17.23■□□□□ 0.35
GABPB1-210ENST00000560825 UBAP1LF5GYI3 381 aa17.23■□□□□ 0.35
GABPB1-210ENST00000560825 LRRC7Q96NW7 1537 aa17.23■□□□□ 0.35
GABPB1-210ENST00000560825 TMEM2Q9UHN6 1383 aa17.22■□□□□ 0.35
GABPB1-210ENST00000560825 TXNDC2Q86VQ3 553 aa17.21■□□□□ 0.35
GABPB1-210ENST00000560825 RRBP1Q9P2E9 1410 aaKnown RBP17.2■□□□□ 0.34
GABPB1-210ENST00000560825 RPRD2Q5VT52 1461 aaKnown RBP17.2■□□□□ 0.34
GABPB1-210ENST00000560825 SPHKAPQ2M3C7 1700 aa17.17■□□□□ 0.34
GABPB1-210ENST00000560825 ZFYVE9O95405 1425 aa17.16■□□□□ 0.34
GABPB1-210ENST00000560825 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms