RNA–Protein interactions for RNA: ENST00000560670.5

TNFAIP2-208, Transcript of TNF alpha induced protein 2, humanhuman

TSL 2

Gene TNFAIP2, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-208ENST00000560670 ZNF644Q9H582 1327 aaPredicted RBP20.67■□□□□ 0.9
TNFAIP2-208ENST00000560670 INO80Q9ULG1 1556 aaPredicted RBP20.67■□□□□ 0.9
TNFAIP2-208ENST00000560670 CPS1P31327 1500 aa20.66■□□□□ 0.9
TNFAIP2-208ENST00000560670 ATP7AQ04656 1500 aa20.66■□□□□ 0.9
TNFAIP2-208ENST00000560670 SPAG9O60271 1321 aaKnown RBP20.66■□□□□ 0.9
TNFAIP2-208ENST00000560670 DNMT1P26358 1616 aaKnown RBP20.65■□□□□ 0.9
TNFAIP2-208ENST00000560670 PTPN23Q9H3S7 1636 aa20.65■□□□□ 0.9
TNFAIP2-208ENST00000560670 A2ML1A8K2U0 1454 aa20.65■□□□□ 0.9
TNFAIP2-208ENST00000560670 TOM1O60784 492 aa20.64■□□□□ 0.89
TNFAIP2-208ENST00000560670 POLR1AO95602 1720 aaPredicted RBP20.64■□□□□ 0.89
TNFAIP2-208ENST00000560670 A2MP01023 1474 aa20.64■□□□□ 0.89
TNFAIP2-208ENST00000560670 CCDC141Q6ZP82 1450 aa20.64■□□□□ 0.89
TNFAIP2-208ENST00000560670 ZNF777Q9ULD5 760 aaPredicted RBP20.62■□□□□ 0.89
TNFAIP2-208ENST00000560670 PIP4K2BP78356 416 aa20.61■□□□□ 0.89
TNFAIP2-208ENST00000560670 NEURL4Q96JN8 1562 aa20.61■□□□□ 0.89
TNFAIP2-208ENST00000560670 SHANK2Q9UPX8 1470 aa20.6■□□□□ 0.89
TNFAIP2-208ENST00000560670 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
TNFAIP2-208ENST00000560670 MAST1Q9Y2H9 1570 aa20.59■□□□□ 0.89
TNFAIP2-208ENST00000560670 HNRNPMP52272 730 aaKnown RBP eCLIP20.58■□□□□ 0.89
TNFAIP2-208ENST00000560670 GGT6Q6P531 493 aa20.58■□□□□ 0.89
TNFAIP2-208ENST00000560670 ALKQ9UM73 1620 aa20.58■□□□□ 0.89
TNFAIP2-208ENST00000560670 RTEL1-TNFRSF6BF6WH68 1400 aa20.58■□□□□ 0.88
TNFAIP2-208ENST00000560670 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.88
TNFAIP2-208ENST00000560670 ADGBQ8N7X0 1667 aa20.58■□□□□ 0.88
TNFAIP2-208ENST00000560670 RSPH4AQ5TD94 716 aa20.55■□□□□ 0.88
TNFAIP2-208ENST00000560670 VWDEQ8N2E2 1590 aa20.55■□□□□ 0.88
TNFAIP2-208ENST00000560670 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
TNFAIP2-208ENST00000560670 RRBP1Q9P2E9 1410 aaKnown RBP20.53■□□□□ 0.88
TNFAIP2-208ENST00000560670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.53■□□□□ 0.885e-6■■■■■ 46.2
TNFAIP2-208ENST00000560670 ABCC5O15440 1437 aa20.53■□□□□ 0.88
TNFAIP2-208ENST00000560670 DAPK1P53355 1430 aa20.51■□□□□ 0.87
TNFAIP2-208ENST00000560670 MED14O60244 1454 aa20.49■□□□□ 0.87
TNFAIP2-208ENST00000560670 TNRQ92752 1358 aa20.49■□□□□ 0.87
TNFAIP2-208ENST00000560670 DEPDC5O75140 1603 aa20.48■□□□□ 0.87
TNFAIP2-208ENST00000560670 PPARGC1BQ86YN6 1023 aaKnown RBP20.47■□□□□ 0.87
TNFAIP2-208ENST00000560670 FAM135AQ9P2D6 1515 aa20.47■□□□□ 0.87
TNFAIP2-208ENST00000560670 PZPP20742 1482 aa20.46■□□□□ 0.87
TNFAIP2-208ENST00000560670 ANKLE2Q86XL3 938 aa20.46■□□□□ 0.87
TNFAIP2-208ENST00000560670 ADGRL2O95490 1459 aa20.45■□□□□ 0.86
TNFAIP2-208ENST00000560670 FBXO31Q5XUX0 539 aaPredicted RBP20.45■□□□□ 0.86
TNFAIP2-208ENST00000560670 DHX29Q7Z478 1369 aaKnown RBP20.43■□□□□ 0.86
TNFAIP2-208ENST00000560670 STRCP1A6NGW2 1772 aa20.43■□□□□ 0.86
TNFAIP2-208ENST00000560670 NPHP4O75161 1426 aaPredicted RBP20.43■□□□□ 0.86
TNFAIP2-208ENST00000560670 NLRP1Q9C000 1473 aa20.42■□□□□ 0.86
TNFAIP2-208ENST00000560670 THEMISQ8N1K5 641 aaPredicted RBP20.42■□□□□ 0.86
TNFAIP2-208ENST00000560670 KDM5DQ9BY66 1539 aa20.42■□□□□ 0.86
TNFAIP2-208ENST00000560670 IQGAP1P46940 1657 aa20.41■□□□□ 0.86
TNFAIP2-208ENST00000560670 RNF17Q9BXT8 1623 aaKnown RBP20.41■□□□□ 0.86
TNFAIP2-208ENST00000560670 LRRC7Q96NW7 1537 aa20.4■□□□□ 0.86
TNFAIP2-208ENST00000560670 SYNMO15061 1565 aa20.4■□□□□ 0.86
TNFAIP2-208ENST00000560670 UGGT1Q9NYU2 1555 aa20.4■□□□□ 0.86
TNFAIP2-208ENST00000560670 TSPY4P0CV99 314 aa20.39■□□□□ 0.85
TNFAIP2-208ENST00000560670 TSPY10P0CW01 314 aa20.39■□□□□ 0.85
TNFAIP2-208ENST00000560670 RGS17Q9UGC6 210 aaPredicted RBP20.39■□□□□ 0.85
TNFAIP2-208ENST00000560670 EIF2AK4Q9P2K8 1649 aaKnown RBP20.38■□□□□ 0.85
TNFAIP2-208ENST00000560670 DUOX2Q9NRD8 1548 aa20.37■□□□□ 0.85
TNFAIP2-208ENST00000560670 FAM50AQ14320 339 aaKnown RBP20.36■□□□□ 0.85
TNFAIP2-208ENST00000560670 KIF3BO15066 747 aa20.35■□□□□ 0.85
TNFAIP2-208ENST00000560670 ROCK1Q13464 1354 aa20.34■□□□□ 0.85
TNFAIP2-208ENST00000560670 ERBINQ96RT1 1412 aa20.34■□□□□ 0.85
TNFAIP2-208ENST00000560670 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
TNFAIP2-208ENST00000560670 WASHC2CQ9Y4E1 1318 aa20.33■□□□□ 0.85
TNFAIP2-208ENST00000560670 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
TNFAIP2-208ENST00000560670 ANKRD30AQ9BXX3 1397 aa20.32■□□□□ 0.84
TNFAIP2-208ENST00000560670 MROH1Q8NDA8 1641 aa20.3■□□□□ 0.84
TNFAIP2-208ENST00000560670 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
TNFAIP2-208ENST00000560670 XIRP1Q702N8 1843 aaKnown RBP20.28■□□□□ 0.84
TNFAIP2-208ENST00000560670 PRDM15P57071 1507 aaPredicted RBP20.27■□□□□ 0.84
TNFAIP2-208ENST00000560670 UBR1Q8IWV7 1749 aa20.23■□□□□ 0.83
TNFAIP2-208ENST00000560670 CHIC2Q9UKJ5 165 aa20.23■□□□□ 0.83
TNFAIP2-208ENST00000560670 POTEAQ6S8J7 498 aa20.22■□□□□ 0.83
TNFAIP2-208ENST00000560670 RRP7BPQ9NSQ0 103 aa20.22■□□□□ 0.83
TNFAIP2-208ENST00000560670 FAM135BQ49AJ0 1406 aa20.22■□□□□ 0.83
TNFAIP2-208ENST00000560670 ANKRD50Q9ULJ7 1429 aa20.22■□□□□ 0.83
TNFAIP2-208ENST00000560670 ABCC3O15438 1527 aa20.21■□□□□ 0.83
TNFAIP2-208ENST00000560670 GCC2Q8IWJ2 1684 aa20.21■□□□□ 0.83
TNFAIP2-208ENST00000560670 ERVK-7P63135 1459 aa20.2■□□□□ 0.82
TNFAIP2-208ENST00000560670 SCAF11Q99590 1463 aaKnown RBP20.2■□□□□ 0.82
TNFAIP2-208ENST00000560670 HFM1A2PYH4 1435 aa20.19■□□□□ 0.82
TNFAIP2-208ENST00000560670 UNC13BO14795 1591 aa20.18■□□□□ 0.82
TNFAIP2-208ENST00000560670 ARHGAP23Q9P227 1491 aa20.18■□□□□ 0.82
TNFAIP2-208ENST00000560670 NAIPQ13075 1403 aa20.17■□□□□ 0.82
TNFAIP2-208ENST00000560670 SLIT1O75093 1534 aa20.17■□□□□ 0.82
TNFAIP2-208ENST00000560670 LMTK2Q8IWU2 1503 aa20.16■□□□□ 0.82
TNFAIP2-208ENST00000560670 CFAP65Q6ZU64 1925 aaKnown RBP20.16■□□□□ 0.82
TNFAIP2-208ENST00000560670 LTKP29376 864 aa20.14■□□□□ 0.81
TNFAIP2-208ENST00000560670 ITGAEP38570 1179 aa20.13■□□□□ 0.81
TNFAIP2-208ENST00000560670 SETD1AO15047 1707 aaKnown RBP20.12■□□□□ 0.81
TNFAIP2-208ENST00000560670 ROBO1Q9Y6N7 1651 aa20.11■□□□□ 0.81
TNFAIP2-208ENST00000560670 CEP152O94986 1710 aa20.11■□□□□ 0.81
TNFAIP2-208ENST00000560670 TXNDC2Q86VQ3 553 aa20.1■□□□□ 0.81
TNFAIP2-208ENST00000560670 ARHGAP31Q2M1Z3 1444 aa20.09■□□□□ 0.81
TNFAIP2-208ENST00000560670 IQGAP3Q86VI3 1631 aa20.08■□□□□ 0.81
TNFAIP2-208ENST00000560670 EFCAB6Q5THR3 1501 aa20.07■□□□□ 0.8
TNFAIP2-208ENST00000560670 TMEM94Q12767 1356 aa20.07■□□□□ 0.8
TNFAIP2-208ENST00000560670 EID1Q9Y6B2 187 aa20.04■□□□□ 0.8
TNFAIP2-208ENST00000560670 TET3O43151 1660 aa20.04■□□□□ 0.8
TNFAIP2-208ENST00000560670 KDM5AP29375 1690 aaKnown RBP20.03■□□□□ 0.8
TNFAIP2-208ENST00000560670 KCNA6P17658 529 aa20.02■□□□□ 0.8
TNFAIP2-208ENST00000560670 PIK3C2BO00750 1634 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms