RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 MROH1Q8NDA8 1641 aa21.97■■□□□ 1.11
TNFAIP2-207ENST00000560562 KDM5DQ9BY66 1539 aa21.97■■□□□ 1.11
TNFAIP2-207ENST00000560562 ABCC5O15440 1437 aa21.97■■□□□ 1.11
TNFAIP2-207ENST00000560562 EIF2AK4Q9P2K8 1649 aaKnown RBP21.97■■□□□ 1.11
TNFAIP2-207ENST00000560562 SHANK2Q9UPX8 1470 aa21.95■■□□□ 1.1
TNFAIP2-207ENST00000560562 FAM135AQ9P2D6 1515 aa21.94■■□□□ 1.1
TNFAIP2-207ENST00000560562 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
TNFAIP2-207ENST00000560562 DAPK1P53355 1430 aa21.93■■□□□ 1.1
TNFAIP2-207ENST00000560562 CEP170BQ9Y4F5 1589 aaPredicted RBP21.92■■□□□ 1.1
TNFAIP2-207ENST00000560562 CEP152O94986 1710 aa21.92■■□□□ 1.1
TNFAIP2-207ENST00000560562 CAMSAP1Q5T5Y3 1602 aa21.91■■□□□ 1.1
TNFAIP2-207ENST00000560562 DUOX2Q9NRD8 1548 aa21.9■■□□□ 1.1
TNFAIP2-207ENST00000560562 ZC3H13Q5T200 1668 aaKnown RBP21.9■■□□□ 1.1
TNFAIP2-207ENST00000560562 PZPP20742 1482 aa21.9■■□□□ 1.1
TNFAIP2-207ENST00000560562 NCOA1Q15788 1441 aa21.9■■□□□ 1.1
TNFAIP2-207ENST00000560562 ABCC3O15438 1527 aa21.89■■□□□ 1.09
TNFAIP2-207ENST00000560562 CFAP65Q6ZU64 1925 aaKnown RBP21.87■■□□□ 1.09
TNFAIP2-207ENST00000560562 KIF15Q9NS87 1388 aa21.86■■□□□ 1.09
TNFAIP2-207ENST00000560562 FBXO31Q5XUX0 539 aaPredicted RBP21.86■■□□□ 1.09
TNFAIP2-207ENST00000560562 WASHC2CQ9Y4E1 1318 aa21.85■■□□□ 1.09
TNFAIP2-207ENST00000560562 DEPDC5O75140 1603 aa21.85■■□□□ 1.09
TNFAIP2-207ENST00000560562 PRDM15P57071 1507 aaPredicted RBP21.84■■□□□ 1.09
TNFAIP2-207ENST00000560562 PTPRTO14522 1441 aa21.82■■□□□ 1.08
TNFAIP2-207ENST00000560562 A2ML1A8K2U0 1454 aa21.82■■□□□ 1.08
TNFAIP2-207ENST00000560562 ERBINQ96RT1 1412 aa21.82■■□□□ 1.08
TNFAIP2-207ENST00000560562 RRP7BPQ9NSQ0 103 aa21.81■■□□□ 1.08
TNFAIP2-207ENST00000560562 TNRQ92752 1358 aa21.81■■□□□ 1.08
TNFAIP2-207ENST00000560562 PLA2R1Q13018 1463 aa21.79■■□□□ 1.08
TNFAIP2-207ENST00000560562 SPATA31D1Q6ZQQ2 1576 aa21.79■■□□□ 1.08
TNFAIP2-207ENST00000560562 CHIC2Q9UKJ5 165 aa21.79■■□□□ 1.08
TNFAIP2-207ENST00000560562 ADGRL2O95490 1459 aa21.78■■□□□ 1.08
TNFAIP2-207ENST00000560562 FBXO41Q8TF61 875 aa21.78■■□□□ 1.08
TNFAIP2-207ENST00000560562 POLR1AO95602 1720 aaPredicted RBP21.78■■□□□ 1.08
TNFAIP2-207ENST00000560562 DMRT2Q9Y5R5 561 aa21.77■■□□□ 1.08
TNFAIP2-207ENST00000560562 NCKAP5LQ9HCH0 1330 aa21.77■■□□□ 1.07
TNFAIP2-207ENST00000560562 ERVK-7P63135 1459 aa21.76■■□□□ 1.07
TNFAIP2-207ENST00000560562 LTBP4Q8N2S1 1624 aa21.76■■□□□ 1.07
TNFAIP2-207ENST00000560562 ANKRD30AQ9BXX3 1397 aa21.75■■□□□ 1.07
TNFAIP2-207ENST00000560562 FAM50AQ14320 339 aaKnown RBP21.74■■□□□ 1.07
TNFAIP2-207ENST00000560562 CERKQ8TCT0 537 aa21.74■■□□□ 1.07
TNFAIP2-207ENST00000560562 VWDEQ8N2E2 1590 aa21.74■■□□□ 1.07
TNFAIP2-207ENST00000560562 NEURL4Q96JN8 1562 aa21.74■■□□□ 1.07
TNFAIP2-207ENST00000560562 PPARGC1BQ86YN6 1023 aaKnown RBP21.72■■□□□ 1.07
TNFAIP2-207ENST00000560562 NLRP1Q9C000 1473 aa21.72■■□□□ 1.07
TNFAIP2-207ENST00000560562 UGGT1Q9NYU2 1555 aa21.7■■□□□ 1.06
TNFAIP2-207ENST00000560562 UBR1Q8IWV7 1749 aa21.68■■□□□ 1.06
TNFAIP2-207ENST00000560562 LMTK2Q8IWU2 1503 aa21.67■■□□□ 1.06
TNFAIP2-207ENST00000560562 ARHGAP31Q2M1Z3 1444 aa21.67■■□□□ 1.06
TNFAIP2-207ENST00000560562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.67■■□□□ 1.06
TNFAIP2-207ENST00000560562 PKD2Q13563 968 aa21.66■■□□□ 1.06
TNFAIP2-207ENST00000560562 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.65■■□□□ 1.065e-6■■■■■ 46.2
TNFAIP2-207ENST00000560562 EFCAB6Q5THR3 1501 aa21.63■■□□□ 1.05
TNFAIP2-207ENST00000560562 ANKRD50Q9ULJ7 1429 aa21.63■■□□□ 1.05
TNFAIP2-207ENST00000560562 ZNF335Q9H4Z2 1342 aaPredicted RBP21.63■■□□□ 1.05
TNFAIP2-207ENST00000560562 PIK3C2BO00750 1634 aa21.62■■□□□ 1.05
TNFAIP2-207ENST00000560562 UNC13BO14795 1591 aa21.61■■□□□ 1.05
TNFAIP2-207ENST00000560562 SYNMO15061 1565 aa21.61■■□□□ 1.05
TNFAIP2-207ENST00000560562 KANK1Q14678 1352 aa21.6■■□□□ 1.05
TNFAIP2-207ENST00000560562 IQGAP1P46940 1657 aa21.58■■□□□ 1.05
TNFAIP2-207ENST00000560562 TET3O43151 1660 aa21.58■■□□□ 1.04
TNFAIP2-207ENST00000560562 THEMISQ8N1K5 641 aaPredicted RBP21.57■■□□□ 1.04
TNFAIP2-207ENST00000560562 MED14O60244 1454 aa21.57■■□□□ 1.04
TNFAIP2-207ENST00000560562 GCC2Q8IWJ2 1684 aa21.57■■□□□ 1.04
TNFAIP2-207ENST00000560562 ROCK1Q13464 1354 aa21.56■■□□□ 1.04
TNFAIP2-207ENST00000560562 IQSEC2Q5JU85 1478 aa21.55■■□□□ 1.04
TNFAIP2-207ENST00000560562 STRCP1A6NGW2 1772 aa21.54■■□□□ 1.04
TNFAIP2-207ENST00000560562 NOS1P29475 1434 aa21.54■■□□□ 1.04
TNFAIP2-207ENST00000560562 ANKLE2Q86XL3 938 aa21.54■■□□□ 1.04
TNFAIP2-207ENST00000560562 KDM5AP29375 1690 aaKnown RBP21.54■■□□□ 1.04
TNFAIP2-207ENST00000560562 NPHP4O75161 1426 aaPredicted RBP21.53■■□□□ 1.04
TNFAIP2-207ENST00000560562 MYO5BQ9ULV0 1848 aa21.53■■□□□ 1.04
TNFAIP2-207ENST00000560562 ARHGAP23Q9P227 1491 aa21.53■■□□□ 1.04
TNFAIP2-207ENST00000560562 SLIT1O75093 1534 aa21.53■■□□□ 1.04
TNFAIP2-207ENST00000560562 ITGAEP38570 1179 aa21.53■■□□□ 1.04
TNFAIP2-207ENST00000560562 RRBP1Q9P2E9 1410 aaKnown RBP21.53■■□□□ 1.04
TNFAIP2-207ENST00000560562 E9PCH4 1651 aa21.52■■□□□ 1.04
TNFAIP2-207ENST00000560562 IQGAP3Q86VI3 1631 aa21.52■■□□□ 1.04
TNFAIP2-207ENST00000560562 SCAF11Q99590 1463 aaKnown RBP21.49■■□□□ 1.03
TNFAIP2-207ENST00000560562 RPRD2Q5VT52 1461 aaKnown RBP21.48■■□□□ 1.03
TNFAIP2-207ENST00000560562 ADGRB3O60242 1522 aa21.47■■□□□ 1.03
TNFAIP2-207ENST00000560562 LTKP29376 864 aa21.46■■□□□ 1.03
TNFAIP2-207ENST00000560562 IDI1Q13907 227 aa21.46■■□□□ 1.03
TNFAIP2-207ENST00000560562 CPS1P31327 1500 aa21.45■■□□□ 1.02
TNFAIP2-207ENST00000560562 TMEM2Q9UHN6 1383 aa21.43■■□□□ 1.02
TNFAIP2-207ENST00000560562 TMEM131LA2VDJ0 1609 aa21.41■■□□□ 1.02
TNFAIP2-207ENST00000560562 TXNDC2Q86VQ3 553 aa21.39■■□□□ 1.02
TNFAIP2-207ENST00000560562 XIRP1Q702N8 1843 aaKnown RBP21.39■■□□□ 1.01
TNFAIP2-207ENST00000560562 NUP155O75694 1391 aa21.38■■□□□ 1.01
TNFAIP2-207ENST00000560562 ALKQ9UM73 1620 aa21.38■■□□□ 1.01
TNFAIP2-207ENST00000560562 NAIPQ13075 1403 aa21.37■■□□□ 1.01
TNFAIP2-207ENST00000560562 SPHKAPQ2M3C7 1700 aa21.36■■□□□ 1.01
TNFAIP2-207ENST00000560562 SLC52A1Q9NWF4 448 aa21.36■■□□□ 1.01
TNFAIP2-207ENST00000560562 STAG3Q9UJ98 1225 aa21.36■■□□□ 1.01
TNFAIP2-207ENST00000560562 LRRC7Q96NW7 1537 aa21.35■■□□□ 1.01
TNFAIP2-207ENST00000560562 ZFYVE9O95405 1425 aa21.34■■□□□ 1.01
TNFAIP2-207ENST00000560562 UBAP1LF5GYI3 381 aa21.34■■□□□ 1.01
TNFAIP2-207ENST00000560562 EID1Q9Y6B2 187 aa21.32■■□□□ 1
TNFAIP2-207ENST00000560562 HFM1A2PYH4 1435 aa21.29■■□□□ 1
TNFAIP2-207ENST00000560562 RIMS2Q9UQ26 1411 aa21.28■■□□□ 1
TNFAIP2-207ENST00000560562 NWD1Q149M9 1564 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms