RNA–Protein interactions for RNA: ENST00000560460.5

RMDN3-208, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-208ENST00000560460 PKD2Q13563 968 aa30.87■■■□□ 2.53
RMDN3-208ENST00000560460 WASHC2CQ9Y4E1 1318 aa30.86■■■□□ 2.53
RMDN3-208ENST00000560460 A2ML1A8K2U0 1454 aa30.86■■■□□ 2.53
RMDN3-208ENST00000560460 FAM135AQ9P2D6 1515 aa30.85■■■□□ 2.53
RMDN3-208ENST00000560460 TCOF1Q13428 1488 aaKnown RBP30.85■■■□□ 2.53
RMDN3-208ENST00000560460 KANK4Q5T7N3 995 aaPredicted RBP30.85■■■□□ 2.53
RMDN3-208ENST00000560460 FBXO31Q5XUX0 539 aaPredicted RBP30.84■■■□□ 2.53
RMDN3-208ENST00000560460 MAP3K1Q13233 1512 aa30.83■■■□□ 2.53
RMDN3-208ENST00000560460 TNRQ92752 1358 aa30.83■■■□□ 2.53
RMDN3-208ENST00000560460 DNMT1P26358 1616 aaKnown RBP30.83■■■□□ 2.53
RMDN3-208ENST00000560460 PZPP20742 1482 aa30.82■■■□□ 2.53
RMDN3-208ENST00000560460 ZNF335Q9H4Z2 1342 aaPredicted RBP30.82■■■□□ 2.52
RMDN3-208ENST00000560460 IQSEC2Q5JU85 1478 aa30.82■■■□□ 2.52
RMDN3-208ENST00000560460 MAST1Q9Y2H9 1570 aa30.79■■■□□ 2.52
RMDN3-208ENST00000560460 MYOM3Q5VTT5 1437 aa30.78■■■□□ 2.52
RMDN3-208ENST00000560460 MIA2Q96PC5 1412 aa30.75■■■□□ 2.51
RMDN3-208ENST00000560460 RNF17Q9BXT8 1623 aaKnown RBP30.73■■■□□ 2.51
RMDN3-208ENST00000560460 POLR1AO95602 1720 aaPredicted RBP30.73■■■□□ 2.51
RMDN3-208ENST00000560460 EIF2AK4Q9P2K8 1649 aaKnown RBP30.69■■■□□ 2.5
RMDN3-208ENST00000560460 APLP2Q06481 763 aa30.68■■■□□ 2.5
RMDN3-208ENST00000560460 NLRP1Q9C000 1473 aa30.68■■■□□ 2.5
RMDN3-208ENST00000560460 ZC3H13Q5T200 1668 aaKnown RBP30.68■■■□□ 2.5
RMDN3-208ENST00000560460 ABCC3O15438 1527 aa30.68■■■□□ 2.5
RMDN3-208ENST00000560460 NEURL4Q96JN8 1562 aa30.66■■■□□ 2.5
RMDN3-208ENST00000560460 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.66■■■□□ 2.5
RMDN3-208ENST00000560460 DISP3Q9P2K9 1392 aa30.65■■■□□ 2.5
RMDN3-208ENST00000560460 UGGT1Q9NYU2 1555 aa30.64■■■□□ 2.5
RMDN3-208ENST00000560460 UBAP1LF5GYI3 381 aa30.64■■■□□ 2.5
RMDN3-208ENST00000560460 THEMISQ8N1K5 641 aaPredicted RBP30.63■■■□□ 2.49
RMDN3-208ENST00000560460 DUOX2Q9NRD8 1548 aa30.63■■■□□ 2.49
RMDN3-208ENST00000560460 ANKLE2Q86XL3 938 aa30.62■■■□□ 2.49
RMDN3-208ENST00000560460 MROH1Q8NDA8 1641 aa30.62■■■□□ 2.49
RMDN3-208ENST00000560460 CEP152O94986 1710 aa30.61■■■□□ 2.49
RMDN3-208ENST00000560460 PTPN23Q9H3S7 1636 aa30.6■■■□□ 2.49
RMDN3-208ENST00000560460 CROCC2H7BZ55 1655 aa30.59■■■□□ 2.49
RMDN3-208ENST00000560460 SPATA31D1Q6ZQQ2 1576 aa30.58■■■□□ 2.49
RMDN3-208ENST00000560460 KIF15Q9NS87 1388 aa30.57■■■□□ 2.48
RMDN3-208ENST00000560460 CFAP65Q6ZU64 1925 aaKnown RBP30.57■■■□□ 2.48
RMDN3-208ENST00000560460 ERVK-7P63135 1459 aa30.57■■■□□ 2.48
RMDN3-208ENST00000560460 SHANK2Q9UPX8 1470 aa30.57■■■□□ 2.48
RMDN3-208ENST00000560460 ABCC5O15440 1437 aa30.56■■■□□ 2.48
RMDN3-208ENST00000560460 RRP7BPQ9NSQ0 103 aa30.54■■■□□ 2.48
RMDN3-208ENST00000560460 DEPDC5O75140 1603 aa30.53■■■□□ 2.48
RMDN3-208ENST00000560460 NPHP4O75161 1426 aaPredicted RBP30.53■■■□□ 2.48
RMDN3-208ENST00000560460 CPS1P31327 1500 aa30.52■■■□□ 2.48
RMDN3-208ENST00000560460 DAPK1P53355 1430 aa30.51■■■□□ 2.47
RMDN3-208ENST00000560460 FGD6Q6ZV73 1430 aa30.51■■■□□ 2.47
RMDN3-208ENST00000560460 ERBINQ96RT1 1412 aa30.51■■■□□ 2.47
RMDN3-208ENST00000560460 MED14O60244 1454 aa30.5■■■□□ 2.47
RMDN3-208ENST00000560460 PRDM15P57071 1507 aaPredicted RBP30.49■■■□□ 2.47
RMDN3-208ENST00000560460 IQGAP1P46940 1657 aa30.49■■■□□ 2.47
RMDN3-208ENST00000560460 VWDEQ8N2E2 1590 aa30.48■■■□□ 2.47
RMDN3-208ENST00000560460 ILDR2Q71H61 639 aa30.46■■■□□ 2.47
RMDN3-208ENST00000560460 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.46■■■□□ 2.473e-6■■□□□ 12.1
RMDN3-208ENST00000560460 SCAF1Q9H7N4 1312 aaKnown RBP30.45■■■□□ 2.46
RMDN3-208ENST00000560460 UBR1Q8IWV7 1749 aa30.44■■■□□ 2.46
RMDN3-208ENST00000560460 CHIC2Q9UKJ5 165 aa30.43■■■□□ 2.46
RMDN3-208ENST00000560460 ARHGAP31Q2M1Z3 1444 aa30.41■■■□□ 2.46
RMDN3-208ENST00000560460 PIP4K2BP78356 416 aa30.41■■■□□ 2.46
RMDN3-208ENST00000560460 KANK1Q14678 1352 aa30.4■■■□□ 2.46
RMDN3-208ENST00000560460 ANKRD30AQ9BXX3 1397 aa30.4■■■□□ 2.46
RMDN3-208ENST00000560460 TOM1O60784 492 aa30.39■■■□□ 2.46
RMDN3-208ENST00000560460 SCAF11Q99590 1463 aaKnown RBP30.35■■■□□ 2.45
RMDN3-208ENST00000560460 STRCP1A6NGW2 1772 aa30.33■■■□□ 2.45
RMDN3-208ENST00000560460 FAM50AQ14320 339 aaKnown RBP30.31■■■□□ 2.44
RMDN3-208ENST00000560460 PIK3C2BO00750 1634 aa30.3■■■□□ 2.44
RMDN3-208ENST00000560460 HSPA1LP34931 641 aa30.3■■■□□ 2.44
RMDN3-208ENST00000560460 TXNDC2Q86VQ3 553 aa30.3■■■□□ 2.44
RMDN3-208ENST00000560460 SLIT1O75093 1534 aa30.3■■■□□ 2.44
RMDN3-208ENST00000560460 ARHGAP23Q9P227 1491 aa30.29■■■□□ 2.44
RMDN3-208ENST00000560460 LTKP29376 864 aa30.28■■■□□ 2.44
RMDN3-208ENST00000560460 STAG3Q9UJ98 1225 aa30.28■■■□□ 2.44
RMDN3-208ENST00000560460 LMTK2Q8IWU2 1503 aa30.27■■■□□ 2.44
RMDN3-208ENST00000560460 SYNMO15061 1565 aa30.27■■■□□ 2.44
RMDN3-208ENST00000560460 LRRC7Q96NW7 1537 aa30.27■■■□□ 2.44
RMDN3-208ENST00000560460 SOCS7O14512 581 aa30.26■■■□□ 2.43
RMDN3-208ENST00000560460 EID1Q9Y6B2 187 aa30.26■■■□□ 2.43
RMDN3-208ENST00000560460 ADGRL2O95490 1459 aa30.25■■■□□ 2.43
RMDN3-208ENST00000560460 ALKQ9UM73 1620 aa30.22■■■□□ 2.43
RMDN3-208ENST00000560460 EFCAB6Q5THR3 1501 aa30.22■■■□□ 2.43
RMDN3-208ENST00000560460 TMEM2Q9UHN6 1383 aa30.21■■■□□ 2.43
RMDN3-208ENST00000560460 IDI1Q13907 227 aa30.19■■■□□ 2.42
RMDN3-208ENST00000560460 KDM5AP29375 1690 aaKnown RBP30.18■■■□□ 2.42
RMDN3-208ENST00000560460 ANKRD50Q9ULJ7 1429 aa30.17■■■□□ 2.42
RMDN3-208ENST00000560460 NOS1P29475 1434 aa30.15■■■□□ 2.42
RMDN3-208ENST00000560460 SENP3Q9H4L4 574 aaPredicted RBP30.14■■■□□ 2.42
RMDN3-208ENST00000560460 MED1Q15648 1581 aaPredicted RBP30.14■■■□□ 2.42
RMDN3-208ENST00000560460 ADGRB3O60242 1522 aa30.12■■■□□ 2.41
RMDN3-208ENST00000560460 XIRP1Q702N8 1843 aaKnown RBP30.08■■■□□ 2.41
RMDN3-208ENST00000560460 SLC52A1Q9NWF4 448 aa30.08■■■□□ 2.41
RMDN3-208ENST00000560460 RPRD2Q5VT52 1461 aaKnown RBP30.07■■■□□ 2.4
RMDN3-208ENST00000560460 TET3O43151 1660 aa30.06■■■□□ 2.4
RMDN3-208ENST00000560460 SLC26A8Q96RN1 970 aa30.05■■■□□ 2.4
RMDN3-208ENST00000560460 BCANQ96GW7 911 aa30.02■■■□□ 2.4
RMDN3-208ENST00000560460 UNC13BO14795 1591 aa30.02■■■□□ 2.4
RMDN3-208ENST00000560460 GCC2Q8IWJ2 1684 aa30.01■■■□□ 2.4
RMDN3-208ENST00000560460 MYO5BQ9ULV0 1848 aa30■■■□□ 2.39
RMDN3-208ENST00000560460 KCNA6P17658 529 aa29.99■■■□□ 2.39
RMDN3-208ENST00000560460 TMEM94Q12767 1356 aa29.98■■■□□ 2.39
RMDN3-208ENST00000560460 PHF23Q9BUL5 403 aaPredicted RBP29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms