RNA–Protein interactions for RNA: ENST00000560460.5

RMDN3-208, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 931 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-208ENST00000560460 NISCHQ9Y2I1 1504 aa48.81■■■■■ 5.4
RMDN3-208ENST00000560460 ABCC9O60706 1549 aa43.82■■■■■ 4.61
RMDN3-208ENST00000560460 CCDC180Q9P1Z9 1646 aa43.81■■■■■ 4.6
RMDN3-208ENST00000560460 RB1CC1Q8TDY2 1594 aa41.7■■■■■ 4.27
RMDN3-208ENST00000560460 NACADO15069 1562 aa41.4■■■■■ 4.22
RMDN3-208ENST00000560460 DCAF8L2P0C7V8 631 aa41.27■■■■■ 4.2
RMDN3-208ENST00000560460 DNAJC5BQ9UF47 199 aa41.03■■■■■ 4.16
RMDN3-208ENST00000560460 PABPN1Q86U42 306 aaKnown RBP eCLIP40.8■■■■■ 4.12
RMDN3-208ENST00000560460 MYO15BQ96JP2 1530 aa40.78■■■■■ 4.12
RMDN3-208ENST00000560460 UNC13AQ9UPW8 1703 aa40.77■■■■■ 4.12
RMDN3-208ENST00000560460 ZCCHC6Q5VYS8 1495 aaKnown RBP40.46■■■■■ 4.07
RMDN3-208ENST00000560460 BICRAQ9NZM4 1560 aa40.45■■■■■ 4.07
RMDN3-208ENST00000560460 DCAF1Q9Y4B6 1507 aa40.28■■■■■ 4.04
RMDN3-208ENST00000560460 SCRIBQ14160 1630 aa39.97■■■■□ 3.99
RMDN3-208ENST00000560460 SHROOM4Q9ULL8 1493 aa39.89■■■■□ 3.98
RMDN3-208ENST00000560460 CC2D2AQ9P2K1 1620 aa39.57■■■■□ 3.92
RMDN3-208ENST00000560460 EIF4G1Q04637 1599 aaKnown RBP39.48■■■■□ 3.91
RMDN3-208ENST00000560460 CECR2Q9BXF3 1484 aa39.45■■■■□ 3.91
RMDN3-208ENST00000560460 NCAPD3P42695 1498 aa38.19■■■■□ 3.7
RMDN3-208ENST00000560460 ATAD2BQ9ULI0 1458 aa38.1■■■■□ 3.69
RMDN3-208ENST00000560460 SMARCA4P51532 1647 aa38.09■■■■□ 3.69
RMDN3-208ENST00000560460 SMARCA2P51531 1590 aa38.02■■■■□ 3.68
RMDN3-208ENST00000560460 HMGXB3Q12766 1538 aa37.93■■■■□ 3.66
RMDN3-208ENST00000560460 BAZ1AQ9NRL2 1556 aaPredicted RBP37.9■■■■□ 3.66
RMDN3-208ENST00000560460 ERCC6Q03468 1493 aa37.86■■■■□ 3.65
RMDN3-208ENST00000560460 BAZ1BQ9UIG0 1483 aaKnown RBP37.77■■■■□ 3.64
RMDN3-208ENST00000560460 CUX2O14529 1486 aa37.71■■■■□ 3.63
RMDN3-208ENST00000560460 PEG3Q9GZU2 1588 aa37.68■■■■□ 3.62
RMDN3-208ENST00000560460 DNAJC5Q9H3Z4 198 aa37.65■■■■□ 3.62
RMDN3-208ENST00000560460 NESP48681 1621 aa37.64■■■■□ 3.62
RMDN3-208ENST00000560460 MROH2BQ7Z745 1585 aa37.63■■■■□ 3.61
RMDN3-208ENST00000560460 LAMC3Q9Y6N6 1575 aa37.36■■■■□ 3.57
RMDN3-208ENST00000560460 THOC2Q8NI27 1593 aaKnown RBP37.24■■■■□ 3.55
RMDN3-208ENST00000560460 WIZO95785 1651 aa37.2■■■■□ 3.55
RMDN3-208ENST00000560460 KIF21AQ7Z4S6 1674 aa37.18■■■■□ 3.54
RMDN3-208ENST00000560460 PDS5BQ9NTI5 1447 aa37.15■■■■□ 3.54
RMDN3-208ENST00000560460 CADPSQ9ULU8 1353 aa37.05■■■■□ 3.52
RMDN3-208ENST00000560460 RSF1Q96T23 1441 aaPredicted RBP36.85■■■■□ 3.49
RMDN3-208ENST00000560460 MRC2Q9UBG0 1479 aa36.83■■■■□ 3.49
RMDN3-208ENST00000560460 WDR62O43379 1518 aa36.73■■■■□ 3.47
RMDN3-208ENST00000560460 TOP2AP11388 1531 aaKnown RBP36.72■■■■□ 3.47
RMDN3-208ENST00000560460 CEP164Q9UPV0 1460 aa36.71■■■■□ 3.47
RMDN3-208ENST00000560460 FANCD2Q9BXW9 1451 aa36.66■■■■□ 3.46
RMDN3-208ENST00000560460 CFTRP13569 1480 aa36.63■■■■□ 3.45
RMDN3-208ENST00000560460 URB2Q14146 1524 aaKnown RBP36.35■■■■□ 3.41
RMDN3-208ENST00000560460 PRDM2Q13029 1718 aa36.32■■■■□ 3.4
RMDN3-208ENST00000560460 CCDC88BA6NC98 1476 aa36.3■■■■□ 3.4
RMDN3-208ENST00000560460 TRIM41Q8WV44 630 aa36.11■■■■□ 3.37
RMDN3-208ENST00000560460 OSCARQ8IYS5 282 aa36.01■■■■□ 3.36
RMDN3-208ENST00000560460 TOPBP1Q92547 1522 aa35.97■■■■□ 3.35
RMDN3-208ENST00000560460 IFT140Q96RY7 1462 aa35.96■■■■□ 3.35
RMDN3-208ENST00000560460 ZNF608Q9ULD9 1512 aaPredicted RBP35.91■■■■□ 3.34
RMDN3-208ENST00000560460 ABCC8Q09428 1581 aa35.87■■■■□ 3.33
RMDN3-208ENST00000560460 DNMBPQ6XZF7 1577 aa35.84■■■■□ 3.33
RMDN3-208ENST00000560460 EIF4G3O43432 1585 aaKnown RBP35.73■■■■□ 3.31
RMDN3-208ENST00000560460 TARBP1Q13395 1621 aaKnown RBP35.64■■■■□ 3.3
RMDN3-208ENST00000560460 POLA1P09884 1462 aaPredicted RBP35.6■■■■□ 3.29
RMDN3-208ENST00000560460 AQRO60306 1485 aaKnown RBP eCLIP35.59■■■■□ 3.297e-7■■■■■ 42.9
RMDN3-208ENST00000560460 RIMBP3CA6NJZ7 1639 aa35.57■■■■□ 3.28
RMDN3-208ENST00000560460 RIMBP3BA6NNM3 1639 aa35.57■■■■□ 3.28
RMDN3-208ENST00000560460 RIMBP3Q9UFD9 1639 aa35.57■■■■□ 3.28
RMDN3-208ENST00000560460 RAD54L2Q9Y4B4 1467 aa35.48■■■■□ 3.27
RMDN3-208ENST00000560460 CHD1O14646 1710 aa35.47■■■■□ 3.27
RMDN3-208ENST00000560460 ARHGEF11O15085 1522 aa35.44■■■■□ 3.26
RMDN3-208ENST00000560460 SOGA1O94964 1423 aa35.44■■■■□ 3.26
RMDN3-208ENST00000560460 FBLN2P98095 1184 aa35.4■■■■□ 3.26
RMDN3-208ENST00000560460 FGD5Q6ZNL6 1462 aa35.39■■■■□ 3.26
RMDN3-208ENST00000560460 TDRD9Q8NDG6 1382 aaKnown RBP35.38■■■■□ 3.25
RMDN3-208ENST00000560460 CUX1P39880 1505 aa35.36■■■■□ 3.25
RMDN3-208ENST00000560460 SUPT5HO00267 1087 aaKnown RBP35.31■■■■□ 3.24
RMDN3-208ENST00000560460 WDR97A6NE52 1622 aa35.26■■■■□ 3.24
RMDN3-208ENST00000560460 SNAPC4Q5SXM2 1469 aa35.24■■■■□ 3.23
RMDN3-208ENST00000560460 CYB5RLQ6IPT4 315 aa35.2■■■■□ 3.23
RMDN3-208ENST00000560460 GRIN2BQ13224 1484 aa35.13■■■■□ 3.21
RMDN3-208ENST00000560460 MAGI1Q96QZ7 1491 aaPredicted RBP35.13■■■■□ 3.21
RMDN3-208ENST00000560460 CHMP7Q8WUX9 453 aaPredicted RBP35.11■■■■□ 3.21
RMDN3-208ENST00000560460 ARAP1Q96P48 1450 aa35.09■■■■□ 3.21
RMDN3-208ENST00000560460 SYNJ1O43426 1573 aa35.04■■■■□ 3.2
RMDN3-208ENST00000560460 PBRM1Q86U86 1689 aa35.03■■■■□ 3.2
RMDN3-208ENST00000560460 GAPVD1Q14C86 1478 aa35.02■■■■□ 3.2
RMDN3-208ENST00000560460 CLASP1Q7Z460 1538 aa35.01■■■■□ 3.2
RMDN3-208ENST00000560460 SYNJ2O15056 1496 aa35.01■■■■□ 3.19
RMDN3-208ENST00000560460 ABCA10Q8WWZ4 1543 aa34.96■■■■□ 3.19
RMDN3-208ENST00000560460 ABCA5Q8WWZ7 1642 aa34.93■■■■□ 3.18
RMDN3-208ENST00000560460 WRNQ14191 1432 aaPredicted RBP eCLIP34.85■■■■□ 3.17
RMDN3-208ENST00000560460 TRHP20396 242 aaPredicted RBP34.83■■■■□ 3.17
RMDN3-208ENST00000560460 BIVM-ERCC5R4GMW8 1640 aa34.8■■■■□ 3.16
RMDN3-208ENST00000560460 TOP2BQ02880 1626 aa34.79■■■■□ 3.16
RMDN3-208ENST00000560460 GRIN2AQ12879 1464 aa34.68■■■■□ 3.14
RMDN3-208ENST00000560460 ADAMTS12P58397 1594 aa34.67■■■■□ 3.14
RMDN3-208ENST00000560460 FHAD1B1AJZ9 1412 aa34.56■■■■□ 3.12
RMDN3-208ENST00000560460 CEP170Q5SW79 1584 aa34.56■■■■□ 3.12
RMDN3-208ENST00000560460 ERICH3Q5RHP9 1530 aa34.54■■■■□ 3.12
RMDN3-208ENST00000560460 NUP160Q12769 1436 aa34.54■■■■□ 3.12
RMDN3-208ENST00000560460 ERCC6L2Q5T890 1561 aa34.49■■■■□ 3.11
RMDN3-208ENST00000560460 SHROOM2Q13796 1616 aa34.39■■■■□ 3.1
RMDN3-208ENST00000560460 PRG4Q92954 1404 aaPredicted RBP34.23■■■■□ 3.07
RMDN3-208ENST00000560460 JPH4Q96JJ6 628 aa34.2■■■■□ 3.07
RMDN3-208ENST00000560460 RUSC2Q8N2Y8 1516 aa34.19■■■■□ 3.06
RMDN3-208ENST00000560460 KIF27Q86VH2 1401 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms