RNA–Protein interactions for RNA: ENST00000560044.5

ETFA-211, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-211ENST00000560044 FAM135AQ9P2D6 1515 aa28.77■■■□□ 2.2
ETFA-211ENST00000560044 ABCC5O15440 1437 aa28.77■■■□□ 2.2
ETFA-211ENST00000560044 PTPRKQ15262 1439 aa28.77■■■□□ 2.2
ETFA-211ENST00000560044 EIF2AK4Q9P2K8 1649 aaKnown RBP28.76■■■□□ 2.19
ETFA-211ENST00000560044 KDM5DQ9BY66 1539 aa28.75■■■□□ 2.19
ETFA-211ENST00000560044 RNF17Q9BXT8 1623 aaKnown RBP28.75■■■□□ 2.19
ETFA-211ENST00000560044 DAPK1P53355 1430 aa28.73■■■□□ 2.19
ETFA-211ENST00000560044 WASHC2CQ9Y4E1 1318 aa28.72■■■□□ 2.19
ETFA-211ENST00000560044 MYO3AQ8NEV4 1616 aa28.72■■■□□ 2.19
ETFA-211ENST00000560044 DUOX2Q9NRD8 1548 aa28.71■■■□□ 2.19
ETFA-211ENST00000560044 CERKQ8TCT0 537 aa28.69■■■□□ 2.18
ETFA-211ENST00000560044 ZNF142P52746 1687 aaPredicted RBP28.68■■■□□ 2.18
ETFA-211ENST00000560044 PTPRTO14522 1441 aa28.67■■■□□ 2.18
ETFA-211ENST00000560044 NCOA1Q15788 1441 aa28.67■■■□□ 2.18
ETFA-211ENST00000560044 MROH1Q8NDA8 1641 aa28.66■■■□□ 2.18
ETFA-211ENST00000560044 KIF15Q9NS87 1388 aa28.66■■■□□ 2.18
ETFA-211ENST00000560044 ZC3H13Q5T200 1668 aaKnown RBP28.65■■■□□ 2.18
ETFA-211ENST00000560044 FBXO31Q5XUX0 539 aaPredicted RBP28.65■■■□□ 2.18
ETFA-211ENST00000560044 CAMSAP1Q5T5Y3 1602 aa28.64■■■□□ 2.18
ETFA-211ENST00000560044 PZPP20742 1482 aa28.64■■■□□ 2.17
ETFA-211ENST00000560044 CEP170BQ9Y4F5 1589 aaPredicted RBP28.63■■■□□ 2.17
ETFA-211ENST00000560044 ABCC3O15438 1527 aa28.62■■■□□ 2.17
ETFA-211ENST00000560044 ERBINQ96RT1 1412 aa28.6■■■□□ 2.17
ETFA-211ENST00000560044 RRP7BPQ9NSQ0 103 aa28.6■■■□□ 2.17
ETFA-211ENST00000560044 CEP152O94986 1710 aa28.59■■■□□ 2.17
ETFA-211ENST00000560044 NCKAP5LQ9HCH0 1330 aa28.59■■■□□ 2.17
ETFA-211ENST00000560044 FAM50AQ14320 339 aaKnown RBP28.58■■■□□ 2.17
ETFA-211ENST00000560044 TNRQ92752 1358 aa28.58■■■□□ 2.17
ETFA-211ENST00000560044 ANKRD30AQ9BXX3 1397 aa28.57■■■□□ 2.16
ETFA-211ENST00000560044 PRDM15P57071 1507 aaPredicted RBP28.56■■■□□ 2.16
ETFA-211ENST00000560044 PKD2Q13563 968 aa28.56■■■□□ 2.16
ETFA-211ENST00000560044 CHIC2Q9UKJ5 165 aa28.56■■■□□ 2.16
ETFA-211ENST00000560044 A2ML1A8K2U0 1454 aa28.55■■■□□ 2.16
ETFA-211ENST00000560044 DEPDC5O75140 1603 aa28.54■■■□□ 2.16
ETFA-211ENST00000560044 ADGRL2O95490 1459 aa28.54■■■□□ 2.16
ETFA-211ENST00000560044 PLA2R1Q13018 1463 aa28.54■■■□□ 2.16
ETFA-211ENST00000560044 PPARGC1BQ86YN6 1023 aaKnown RBP28.48■■■□□ 2.15
ETFA-211ENST00000560044 SPATA31D1Q6ZQQ2 1576 aa28.48■■■□□ 2.15
ETFA-211ENST00000560044 CFAP65Q6ZU64 1925 aaKnown RBP28.45■■■□□ 2.15
ETFA-211ENST00000560044 ERVK-7P63135 1459 aa28.45■■■□□ 2.14
ETFA-211ENST00000560044 NLRP1Q9C000 1473 aa28.45■■■□□ 2.14
ETFA-211ENST00000560044 THEMISQ8N1K5 641 aaPredicted RBP28.44■■■□□ 2.14
ETFA-211ENST00000560044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.43■■■□□ 2.14
ETFA-211ENST00000560044 LTBP4Q8N2S1 1624 aa28.43■■■□□ 2.14
ETFA-211ENST00000560044 VWDEQ8N2E2 1590 aa28.41■■■□□ 2.14
ETFA-211ENST00000560044 ARHGAP31Q2M1Z3 1444 aa28.4■■■□□ 2.14
ETFA-211ENST00000560044 KANK1Q14678 1352 aa28.39■■■□□ 2.14
ETFA-211ENST00000560044 POLR1AO95602 1720 aaPredicted RBP28.39■■■□□ 2.14
ETFA-211ENST00000560044 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.38■■■□□ 2.139e-9■■□□□ 14.3
ETFA-211ENST00000560044 ANKLE2Q86XL3 938 aa28.38■■■□□ 2.13
ETFA-211ENST00000560044 ZNF335Q9H4Z2 1342 aaPredicted RBP28.38■■■□□ 2.13
ETFA-211ENST00000560044 UGGT1Q9NYU2 1555 aa28.37■■■□□ 2.13
ETFA-211ENST00000560044 ANKRD50Q9ULJ7 1429 aa28.37■■■□□ 2.13
ETFA-211ENST00000560044 LMTK2Q8IWU2 1503 aa28.37■■■□□ 2.13
ETFA-211ENST00000560044 ROCK1Q13464 1354 aa28.33■■■□□ 2.13
ETFA-211ENST00000560044 NEURL4Q96JN8 1562 aa28.33■■■□□ 2.12
ETFA-211ENST00000560044 EFCAB6Q5THR3 1501 aa28.3■■■□□ 2.12
ETFA-211ENST00000560044 UBR1Q8IWV7 1749 aa28.29■■■□□ 2.12
ETFA-211ENST00000560044 IQSEC2Q5JU85 1478 aa28.29■■■□□ 2.12
ETFA-211ENST00000560044 UNC13BO14795 1591 aa28.28■■■□□ 2.12
ETFA-211ENST00000560044 RRBP1Q9P2E9 1410 aaKnown RBP28.26■■■□□ 2.12
ETFA-211ENST00000560044 ITGAEP38570 1179 aa28.26■■■□□ 2.11
ETFA-211ENST00000560044 TET3O43151 1660 aa28.23■■■□□ 2.11
ETFA-211ENST00000560044 MED14O60244 1454 aa28.23■■■□□ 2.11
ETFA-211ENST00000560044 PIK3C2BO00750 1634 aa28.22■■■□□ 2.11
ETFA-211ENST00000560044 NPHP4O75161 1426 aaPredicted RBP28.22■■■□□ 2.11
ETFA-211ENST00000560044 SYNMO15061 1565 aa28.21■■■□□ 2.11
ETFA-211ENST00000560044 GCC2Q8IWJ2 1684 aa28.2■■■□□ 2.11
ETFA-211ENST00000560044 NOS1P29475 1434 aa28.18■■■□□ 2.1
ETFA-211ENST00000560044 IQGAP1P46940 1657 aa28.18■■■□□ 2.1
ETFA-211ENST00000560044 RPRD2Q5VT52 1461 aaKnown RBP28.17■■■□□ 2.1
ETFA-211ENST00000560044 KDM5AP29375 1690 aaKnown RBP28.16■■■□□ 2.1
ETFA-211ENST00000560044 IQGAP3Q86VI3 1631 aa28.16■■■□□ 2.1
ETFA-211ENST00000560044 SLIT1O75093 1534 aa28.15■■■□□ 2.1
ETFA-211ENST00000560044 UBAP1LF5GYI3 381 aa28.15■■■□□ 2.1
ETFA-211ENST00000560044 IDI1Q13907 227 aa28.15■■■□□ 2.1
ETFA-211ENST00000560044 STAG3Q9UJ98 1225 aa28.15■■■□□ 2.1
ETFA-211ENST00000560044 ARHGAP23Q9P227 1491 aa28.15■■■□□ 2.1
ETFA-211ENST00000560044 LTKP29376 864 aa28.14■■■□□ 2.1
ETFA-211ENST00000560044 TXNDC2Q86VQ3 553 aa28.14■■■□□ 2.1
ETFA-211ENST00000560044 E9PCH4 1651 aa28.12■■■□□ 2.09
ETFA-211ENST00000560044 CPS1P31327 1500 aa28.12■■■□□ 2.09
ETFA-211ENST00000560044 SCAF11Q99590 1463 aaKnown RBP28.11■■■□□ 2.09
ETFA-211ENST00000560044 EID1Q9Y6B2 187 aa28.11■■■□□ 2.09
ETFA-211ENST00000560044 SLC52A1Q9NWF4 448 aa28.09■■■□□ 2.09
ETFA-211ENST00000560044 ADGRB3O60242 1522 aa28.08■■■□□ 2.09
ETFA-211ENST00000560044 TMEM2Q9UHN6 1383 aa28.08■■■□□ 2.09
ETFA-211ENST00000560044 NUP155O75694 1391 aa28.06■■■□□ 2.08
ETFA-211ENST00000560044 MYO5BQ9ULV0 1848 aa28.03■■■□□ 2.08
ETFA-211ENST00000560044 NAIPQ13075 1403 aa28.01■■■□□ 2.08
ETFA-211ENST00000560044 TOM1O60784 492 aa28■■■□□ 2.07
ETFA-211ENST00000560044 STRCP1A6NGW2 1772 aa28■■■□□ 2.07
ETFA-211ENST00000560044 TMEM131LA2VDJ0 1609 aa27.97■■■□□ 2.07
ETFA-211ENST00000560044 HFM1A2PYH4 1435 aa27.95■■■□□ 2.07
ETFA-211ENST00000560044 PIP4K2BP78356 416 aa27.94■■■□□ 2.06
ETFA-211ENST00000560044 SCAF1Q9H7N4 1312 aaKnown RBP27.93■■■□□ 2.06
ETFA-211ENST00000560044 LRRC7Q96NW7 1537 aa27.93■■■□□ 2.06
ETFA-211ENST00000560044 SPHKAPQ2M3C7 1700 aa27.93■■■□□ 2.06
ETFA-211ENST00000560044 ZFYVE9O95405 1425 aa27.9■■■□□ 2.06
ETFA-211ENST00000560044 SLC26A8Q96RN1 970 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms