RNA–Protein interactions for RNA: ENST00000560044.5

ETFA-211, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 5

Gene ETFA, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-211ENST00000560044 NISCHQ9Y2I1 1504 aa45.59■■■■■ 4.89
ETFA-211ENST00000560044 CCDC180Q9P1Z9 1646 aa40.75■■■■■ 4.11
ETFA-211ENST00000560044 ABCC9O60706 1549 aa40.31■■■■■ 4.04
ETFA-211ENST00000560044 RB1CC1Q8TDY2 1594 aa38.49■■■■□ 3.75
ETFA-211ENST00000560044 NACADO15069 1562 aa38.36■■■■□ 3.73
ETFA-211ENST00000560044 DCAF8L2P0C7V8 631 aa38.32■■■■□ 3.72
ETFA-211ENST00000560044 MYO15BQ96JP2 1530 aa38■■■■□ 3.67
ETFA-211ENST00000560044 ZCCHC6Q5VYS8 1495 aaKnown RBP37.92■■■■□ 3.66
ETFA-211ENST00000560044 UNC13AQ9UPW8 1703 aa37.71■■■■□ 3.63
ETFA-211ENST00000560044 DCAF1Q9Y4B6 1507 aa37.71■■■■□ 3.63
ETFA-211ENST00000560044 PABPN1Q86U42 306 aaKnown RBP eCLIP37.65■■■■□ 3.62
ETFA-211ENST00000560044 DNAJC5BQ9UF47 199 aa37.58■■■■□ 3.61
ETFA-211ENST00000560044 BICRAQ9NZM4 1560 aa37.37■■■■□ 3.57
ETFA-211ENST00000560044 SCRIBQ14160 1630 aa37.14■■■■□ 3.54
ETFA-211ENST00000560044 SHROOM4Q9ULL8 1493 aa36.91■■■■□ 3.5
ETFA-211ENST00000560044 EIF4G1Q04637 1599 aaKnown RBP36.41■■■■□ 3.42
ETFA-211ENST00000560044 CC2D2AQ9P2K1 1620 aa36.4■■■■□ 3.42
ETFA-211ENST00000560044 CECR2Q9BXF3 1484 aa36.28■■■■□ 3.4
ETFA-211ENST00000560044 SMARCA4P51532 1647 aa35.49■■■■□ 3.27
ETFA-211ENST00000560044 NCAPD3P42695 1498 aa35.41■■■■□ 3.26
ETFA-211ENST00000560044 BAZ1AQ9NRL2 1556 aaPredicted RBP35.37■■■■□ 3.25
ETFA-211ENST00000560044 ATAD2BQ9ULI0 1458 aa35.35■■■■□ 3.25
ETFA-211ENST00000560044 SMARCA2P51531 1590 aa35.3■■■■□ 3.24
ETFA-211ENST00000560044 HMGXB3Q12766 1538 aa35.21■■■■□ 3.23
ETFA-211ENST00000560044 MROH2BQ7Z745 1585 aa35.14■■■■□ 3.22
ETFA-211ENST00000560044 PEG3Q9GZU2 1588 aa35.13■■■■□ 3.21
ETFA-211ENST00000560044 BAZ1BQ9UIG0 1483 aaKnown RBP35.04■■■■□ 3.2
ETFA-211ENST00000560044 ERCC6Q03468 1493 aa34.78■■■■□ 3.16
ETFA-211ENST00000560044 WIZO95785 1651 aa34.77■■■■□ 3.16
ETFA-211ENST00000560044 NESP48681 1621 aa34.71■■■■□ 3.15
ETFA-211ENST00000560044 CUX2O14529 1486 aa34.58■■■■□ 3.13
ETFA-211ENST00000560044 RSF1Q96T23 1441 aaPredicted RBP34.58■■■■□ 3.13
ETFA-211ENST00000560044 LAMC3Q9Y6N6 1575 aa34.53■■■■□ 3.12
ETFA-211ENST00000560044 CADPSQ9ULU8 1353 aa34.36■■■■□ 3.09
ETFA-211ENST00000560044 TOP2AP11388 1531 aaKnown RBP34.36■■■■□ 3.09
ETFA-211ENST00000560044 PDS5BQ9NTI5 1447 aa34.36■■■■□ 3.09
ETFA-211ENST00000560044 KIF21AQ7Z4S6 1674 aa34.3■■■■□ 3.08
ETFA-211ENST00000560044 DNAJC5Q9H3Z4 198 aa34.27■■■■□ 3.08
ETFA-211ENST00000560044 THOC2Q8NI27 1593 aaKnown RBP34.26■■■■□ 3.07
ETFA-211ENST00000560044 CFTRP13569 1480 aa34.05■■■■□ 3.04
ETFA-211ENST00000560044 MRC2Q9UBG0 1479 aa33.99■■■■□ 3.03
ETFA-211ENST00000560044 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.02
ETFA-211ENST00000560044 CCDC88BA6NC98 1476 aa33.94■■■■□ 3.02
ETFA-211ENST00000560044 CEP164Q9UPV0 1460 aa33.94■■■■□ 3.02
ETFA-211ENST00000560044 WDR62O43379 1518 aa33.89■■■■□ 3.02
ETFA-211ENST00000560044 PRDM2Q13029 1718 aa33.87■■■■□ 3.01
ETFA-211ENST00000560044 URB2Q14146 1524 aaKnown RBP33.64■■■□□ 2.98
ETFA-211ENST00000560044 SUPT5HO00267 1087 aaKnown RBP33.39■■■□□ 2.94
ETFA-211ENST00000560044 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
ETFA-211ENST00000560044 ABCC8Q09428 1581 aa33.32■■■□□ 2.92
ETFA-211ENST00000560044 DNMBPQ6XZF7 1577 aa33.31■■■□□ 2.92
ETFA-211ENST00000560044 IFT140Q96RY7 1462 aa33.25■■■□□ 2.91
ETFA-211ENST00000560044 ZNF608Q9ULD9 1512 aaPredicted RBP33.17■■■□□ 2.9
ETFA-211ENST00000560044 OSCARQ8IYS5 282 aa33.16■■■□□ 2.9
ETFA-211ENST00000560044 TARBP1Q13395 1621 aaKnown RBP33.06■■■□□ 2.88
ETFA-211ENST00000560044 POLA1P09884 1462 aaPredicted RBP33.06■■■□□ 2.88
ETFA-211ENST00000560044 EIF4G3O43432 1585 aaKnown RBP33.02■■■□□ 2.88
ETFA-211ENST00000560044 CUX1P39880 1505 aa33■■■□□ 2.87
ETFA-211ENST00000560044 AQRO60306 1485 aaKnown RBP eCLIP32.94■■■□□ 2.862e-7■□□□□ 10.3
ETFA-211ENST00000560044 FGD5Q6ZNL6 1462 aa32.93■■■□□ 2.86
ETFA-211ENST00000560044 SOGA1O94964 1423 aa32.92■■■□□ 2.86
ETFA-211ENST00000560044 RAD54L2Q9Y4B4 1467 aa32.92■■■□□ 2.86
ETFA-211ENST00000560044 TRIM41Q8WV44 630 aa32.9■■■□□ 2.86
ETFA-211ENST00000560044 TDRD9Q8NDG6 1382 aaKnown RBP32.81■■■□□ 2.84
ETFA-211ENST00000560044 WDR97A6NE52 1622 aa32.77■■■□□ 2.84
ETFA-211ENST00000560044 FBLN2P98095 1184 aa32.7■■■□□ 2.83
ETFA-211ENST00000560044 CHD1O14646 1710 aa32.7■■■□□ 2.83
ETFA-211ENST00000560044 BIVM-ERCC5R4GMW8 1640 aa32.65■■■□□ 2.82
ETFA-211ENST00000560044 TOP2BQ02880 1626 aa32.62■■■□□ 2.81
ETFA-211ENST00000560044 WRNQ14191 1432 aaPredicted RBP eCLIP32.61■■■□□ 2.81
ETFA-211ENST00000560044 SYNJ1O43426 1573 aa32.61■■■□□ 2.81
ETFA-211ENST00000560044 ABCA10Q8WWZ4 1543 aa32.59■■■□□ 2.81
ETFA-211ENST00000560044 SNAPC4Q5SXM2 1469 aa32.59■■■□□ 2.81
ETFA-211ENST00000560044 RIMBP3CA6NJZ7 1639 aa32.57■■■□□ 2.8
ETFA-211ENST00000560044 RIMBP3BA6NNM3 1639 aa32.57■■■□□ 2.8
ETFA-211ENST00000560044 RIMBP3Q9UFD9 1639 aa32.57■■■□□ 2.8
ETFA-211ENST00000560044 GRIN2BQ13224 1484 aa32.56■■■□□ 2.8
ETFA-211ENST00000560044 PBRM1Q86U86 1689 aa32.55■■■□□ 2.8
ETFA-211ENST00000560044 ABCA5Q8WWZ7 1642 aa32.53■■■□□ 2.8
ETFA-211ENST00000560044 ARHGEF11O15085 1522 aa32.52■■■□□ 2.8
ETFA-211ENST00000560044 CHMP7Q8WUX9 453 aaPredicted RBP32.52■■■□□ 2.8
ETFA-211ENST00000560044 GAPVD1Q14C86 1478 aa32.52■■■□□ 2.8
ETFA-211ENST00000560044 MAGI1Q96QZ7 1491 aaPredicted RBP32.52■■■□□ 2.8
ETFA-211ENST00000560044 SYNJ2O15056 1496 aa32.4■■■□□ 2.78
ETFA-211ENST00000560044 CYB5RLQ6IPT4 315 aa32.37■■■□□ 2.77
ETFA-211ENST00000560044 CLASP1Q7Z460 1538 aa32.31■■■□□ 2.76
ETFA-211ENST00000560044 ADAMTS12P58397 1594 aa32.24■■■□□ 2.75
ETFA-211ENST00000560044 ARAP1Q96P48 1450 aa32.23■■■□□ 2.75
ETFA-211ENST00000560044 ERICH3Q5RHP9 1530 aa32.2■■■□□ 2.74
ETFA-211ENST00000560044 GRIN2AQ12879 1464 aa32.16■■■□□ 2.74
ETFA-211ENST00000560044 FHAD1B1AJZ9 1412 aa32.12■■■□□ 2.73
ETFA-211ENST00000560044 CEP170Q5SW79 1584 aa32.04■■■□□ 2.72
ETFA-211ENST00000560044 NUP160Q12769 1436 aa32.03■■■□□ 2.72
ETFA-211ENST00000560044 KIF27Q86VH2 1401 aa31.95■■■□□ 2.71
ETFA-211ENST00000560044 TRHP20396 242 aaPredicted RBP31.89■■■□□ 2.7
ETFA-211ENST00000560044 CUL7Q14999 1698 aa31.86■■■□□ 2.69
ETFA-211ENST00000560044 SHROOM2Q13796 1616 aa31.86■■■□□ 2.69
ETFA-211ENST00000560044 IGF1RP08069 1367 aa31.86■■■□□ 2.69
ETFA-211ENST00000560044 ERCC6L2Q5T890 1561 aa31.83■■■□□ 2.69
ETFA-211ENST00000560044 RUSC2Q8N2Y8 1516 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms