RNA–Protein interactions for RNA: ENST00000559729.5

SEC11A-208, Transcript of SEC11 homolog A, signal peptidase complex subunit, human

TSL 2 BASIC

Gene SEC11A, Length 1,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC11A-208	ENST00000559729	ZNF142	P52746	1687 aa	Predicted RBP	33.06	■■■□□ 2.88
SEC11A-208	ENST00000559729	PTPN23	Q9H3S7	1636 aa		33.06	■■■□□ 2.88
SEC11A-208	ENST00000559729	WASHC2C	Q9Y4E1	1318 aa		33.05	■■■□□ 2.88
SEC11A-208	ENST00000559729	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.05	■■■□□ 2.88
SEC11A-208	ENST00000559729	PTPRT	O14522	1441 aa		33.04	■■■□□ 2.88
SEC11A-208	ENST00000559729	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.03	■■■□□ 2.88
SEC11A-208	ENST00000559729	FAM135A	Q9P2D6	1515 aa		33.02	■■■□□ 2.88
SEC11A-208	ENST00000559729	ABCC5	O15440	1437 aa		33	■■■□□ 2.87
SEC11A-208	ENST00000559729	FGD6	Q6ZV73	1430 aa		33	■■■□□ 2.87
SEC11A-208	ENST00000559729	PZP	P20742	1482 aa		32.99	■■■□□ 2.87
SEC11A-208	ENST00000559729	RNF17	Q9BXT8	1623 aa	Known RBP	32.99	■■■□□ 2.87
SEC11A-208	ENST00000559729	NCKAP5L	Q9HCH0	1330 aa		32.99	■■■□□ 2.87
SEC11A-208	ENST00000559729	CROCC2	H7BZ55	1655 aa		32.98	■■■□□ 2.87
SEC11A-208	ENST00000559729	EIF2AK4	Q9P2K8	1649 aa	Known RBP	32.96	■■■□□ 2.87
SEC11A-208	ENST00000559729	TNR	Q92752	1358 aa		32.96	■■■□□ 2.87
SEC11A-208	ENST00000559729	A2ML1	A8K2U0	1454 aa		32.94	■■■□□ 2.86
SEC11A-208	ENST00000559729	TCOF1	Q13428	1488 aa	Known RBP	32.94	■■■□□ 2.86
SEC11A-208	ENST00000559729	SHANK2	Q9UPX8	1470 aa		32.94	■■■□□ 2.86
SEC11A-208	ENST00000559729	DAPK1	P53355	1430 aa		32.94	■■■□□ 2.86
SEC11A-208	ENST00000559729	DUOX2	Q9NRD8	1548 aa		32.93	■■■□□ 2.86
SEC11A-208	ENST00000559729	PLA2R1	Q13018	1463 aa		32.93	■■■□□ 2.86
SEC11A-208	ENST00000559729	ABCC3	O15438	1527 aa		32.92	■■■□□ 2.86
SEC11A-208	ENST00000559729	DNMT1	P26358	1616 aa	Known RBP	32.92	■■■□□ 2.86
SEC11A-208	ENST00000559729	MROH1	Q8NDA8	1641 aa		32.92	■■■□□ 2.86
SEC11A-208	ENST00000559729	KIF15	Q9NS87	1388 aa		32.91	■■■□□ 2.86
SEC11A-208	ENST00000559729	RRP7BP	Q9NSQ0	103 aa		32.9	■■■□□ 2.86
SEC11A-208	ENST00000559729	ZC3H13	Q5T200	1668 aa	Known RBP	32.88	■■■□□ 2.85
SEC11A-208	ENST00000559729	LTBP4	Q8N2S1	1624 aa		32.86	■■■□□ 2.85
SEC11A-208	ENST00000559729	PKD2	Q13563	968 aa		32.85	■■■□□ 2.85
SEC11A-208	ENST00000559729	CHIC2	Q9UKJ5	165 aa		32.84	■■■□□ 2.85
SEC11A-208	ENST00000559729	CEP152	O94986	1710 aa		32.84	■■■□□ 2.85
SEC11A-208	ENST00000559729	ERBIN	Q96RT1	1412 aa		32.82	■■■□□ 2.84
SEC11A-208	ENST00000559729	NLRP1	Q9C000	1473 aa		32.78	■■■□□ 2.84
SEC11A-208	ENST00000559729	PRDM15	P57071	1507 aa	Predicted RBP	32.77	■■■□□ 2.84
SEC11A-208	ENST00000559729	FAM50A	Q14320	339 aa	Known RBP	32.77	■■■□□ 2.84
SEC11A-208	ENST00000559729	SPATA31D1	Q6ZQQ2	1576 aa		32.77	■■■□□ 2.84
SEC11A-208	ENST00000559729	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	32.77	■■■□□ 2.84
SEC11A-208	ENST00000559729	ERVK-7	P63135	1459 aa		32.76	■■■□□ 2.84
SEC11A-208	ENST00000559729	ANKRD30A	Q9BXX3	1397 aa		32.75	■■■□□ 2.83
SEC11A-208	ENST00000559729	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	32.74	■■■□□ 2.83
SEC11A-208	ENST00000559729	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.74	■■■□□ 2.83
SEC11A-208	ENST00000559729	UGGT1	Q9NYU2	1555 aa		32.74	■■■□□ 2.83
SEC11A-208	ENST00000559729	POLR1A	O95602	1720 aa	Predicted RBP	32.73	■■■□□ 2.83
SEC11A-208	ENST00000559729	NEURL4	Q96JN8	1562 aa		32.72	■■■□□ 2.83
SEC11A-208	ENST00000559729	DEPDC5	O75140	1603 aa		32.71	■■■□□ 2.83
SEC11A-208	ENST00000559729	CFAP65	Q6ZU64	1925 aa	Known RBP	32.71	■■■□□ 2.83
SEC11A-208	ENST00000559729	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.69	■■■□□ 2.82
SEC11A-208	ENST00000559729	ADGRL2	O95490	1459 aa		32.67	■■■□□ 2.82
SEC11A-208	ENST00000559729	ANKLE2	Q86XL3	938 aa		32.65	■■■□□ 2.82
SEC11A-208	ENST00000559729	ARHGAP31	Q2M1Z3	1444 aa		32.64	■■■□□ 2.82
SEC11A-208	ENST00000559729	IQSEC2	Q5JU85	1478 aa		32.63	■■■□□ 2.81
SEC11A-208	ENST00000559729	KANK1	Q14678	1352 aa		32.62	■■■□□ 2.81
SEC11A-208	ENST00000559729	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.62	■■■□□ 2.81
SEC11A-208	ENST00000559729	VWDE	Q8N2E2	1590 aa		32.58	■■■□□ 2.81
SEC11A-208	ENST00000559729	UBR1	Q8IWV7	1749 aa		32.57	■■■□□ 2.81
SEC11A-208	ENST00000559729	NPHP4	O75161	1426 aa	Predicted RBP	32.56	■■■□□ 2.8
SEC11A-208	ENST00000559729	LMTK2	Q8IWU2	1503 aa		32.56	■■■□□ 2.8
SEC11A-208	ENST00000559729	MED14	O60244	1454 aa		32.55	■■■□□ 2.8
SEC11A-208	ENST00000559729	ANKRD50	Q9ULJ7	1429 aa		32.54	■■■□□ 2.8
SEC11A-208	ENST00000559729	IQGAP1	P46940	1657 aa		32.5	■■■□□ 2.79
SEC11A-208	ENST00000559729	PIK3C2B	O00750	1634 aa		32.48	■■■□□ 2.79
SEC11A-208	ENST00000559729	EFCAB6	Q5THR3	1501 aa		32.48	■■■□□ 2.79
SEC11A-208	ENST00000559729	UBAP1L	F5GYI3	381 aa		32.45	■■■□□ 2.79
SEC11A-208	ENST00000559729	CPS1	P31327	1500 aa		32.44	■■■□□ 2.78
SEC11A-208	ENST00000559729	SYNM	O15061	1565 aa		32.44	■■■□□ 2.78
SEC11A-208	ENST00000559729	ARHGAP23	Q9P227	1491 aa		32.43	■■■□□ 2.78
SEC11A-208	ENST00000559729	ITGAE	P38570	1179 aa		32.43	■■■□□ 2.78
SEC11A-208	ENST00000559729	SCAF11	Q99590	1463 aa	Known RBP	32.42	■■■□□ 2.78
SEC11A-208	ENST00000559729	SLIT1	O75093	1534 aa		32.42	■■■□□ 2.78
SEC11A-208	ENST00000559729	LTK	P29376	864 aa		32.42	■■■□□ 2.78
SEC11A-208	ENST00000559729	IDI1	Q13907	227 aa		32.41	■■■□□ 2.78
SEC11A-208	ENST00000559729	NOS1	P29475	1434 aa		32.41	■■■□□ 2.78
SEC11A-208	ENST00000559729	TXNDC2	Q86VQ3	553 aa		32.39	■■■□□ 2.78
SEC11A-208	ENST00000559729	STAG3	Q9UJ98	1225 aa		32.39	■■■□□ 2.78
SEC11A-208	ENST00000559729	ROCK1	Q13464	1354 aa		32.39	■■■□□ 2.78
SEC11A-208	ENST00000559729	UNC13B	O14795	1591 aa		32.37	■■■□□ 2.77
SEC11A-208	ENST00000559729	STRCP1	A6NGW2	1772 aa		32.35	■■■□□ 2.77
SEC11A-208	ENST00000559729	TMEM2	Q9UHN6	1383 aa		32.34	■■■□□ 2.77
SEC11A-208	ENST00000559729	TET3	O43151	1660 aa		32.34	■■■□□ 2.77
SEC11A-208	ENST00000559729	KDM5A	P29375	1690 aa	Known RBP	32.32	■■■□□ 2.76
SEC11A-208	ENST00000559729	RPRD2	Q5VT52	1461 aa	Known RBP	32.32	■■■□□ 2.76
SEC11A-208	ENST00000559729	EID1	Q9Y6B2	187 aa		32.32	■■■□□ 2.76
SEC11A-208	ENST00000559729	ADGRB3	O60242	1522 aa		32.3	■■■□□ 2.76
SEC11A-208	ENST00000559729	GCC2	Q8IWJ2	1684 aa		32.28	■■■□□ 2.76
SEC11A-208	ENST00000559729	SLC52A1	Q9NWF4	448 aa		32.27	■■■□□ 2.76
SEC11A-208	ENST00000559729	LRRC7	Q96NW7	1537 aa		32.26	■■■□□ 2.75
SEC11A-208	ENST00000559729	PIP4K2B	P78356	416 aa		32.25	■■■□□ 2.75
SEC11A-208	ENST00000559729	SCAF1	Q9H7N4	1312 aa	Known RBP	32.25	■■■□□ 2.75
SEC11A-208	ENST00000559729	IQGAP3	Q86VI3	1631 aa		32.24	■■■□□ 2.75
SEC11A-208	ENST00000559729		E9PCH4	1651 aa		32.23	■■■□□ 2.75
SEC11A-208	ENST00000559729	TOM1	O60784	492 aa		32.22	■■■□□ 2.75
SEC11A-208	ENST00000559729	NUP155	O75694	1391 aa		32.2	■■■□□ 2.75
SEC11A-208	ENST00000559729	RRBP1	Q9P2E9	1410 aa	Known RBP	32.2	■■■□□ 2.75
SEC11A-208	ENST00000559729	DISP3	Q9P2K9	1392 aa		32.19	■■■□□ 2.74
SEC11A-208	ENST00000559729	ALK	Q9UM73	1620 aa		32.18	■■■□□ 2.74
SEC11A-208	ENST00000559729	MYO5B	Q9ULV0	1848 aa		32.18	■■■□□ 2.74
SEC11A-208	ENST00000559729	SLC26A8	Q96RN1	970 aa		32.15	■■■□□ 2.74
SEC11A-208	ENST00000559729	SENP3	Q9H4L4	574 aa	Predicted RBP	32.14	■■■□□ 2.74
SEC11A-208	ENST00000559729	TMEM131L	A2VDJ0	1609 aa		32.14	■■■□□ 2.74
SEC11A-208	ENST00000559729	HSPA1L	P34931	641 aa		32.12	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms