RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 CPS1P31327 1500 aa14.84□□□□□ -0.03
SNRPA1-208ENST00000559686 NEURL4Q96JN8 1562 aa14.84□□□□□ -0.03
SNRPA1-208ENST00000559686 A2ML1A8K2U0 1454 aa14.83□□□□□ -0.03
SNRPA1-208ENST00000559686 A2MP01023 1474 aa14.83□□□□□ -0.03
SNRPA1-208ENST00000559686 PLXNC1O60486 1568 aa14.82□□□□□ -0.04
SNRPA1-208ENST00000559686 INO80Q9ULG1 1556 aaPredicted RBP14.81□□□□□ -0.04
SNRPA1-208ENST00000559686 ALKQ9UM73 1620 aa14.81□□□□□ -0.04
SNRPA1-208ENST00000559686 CCDC18Q5T9S5 1454 aa14.8□□□□□ -0.04
SNRPA1-208ENST00000559686 VWDEQ8N2E2 1590 aa14.78□□□□□ -0.04
SNRPA1-208ENST00000559686 NCBP3Q53F19 620 aaKnown RBP14.78□□□□□ -0.04
SNRPA1-208ENST00000559686 FBXO31Q5XUX0 539 aaPredicted RBP14.78□□□□□ -0.04
SNRPA1-208ENST00000559686 ADGBQ8N7X0 1667 aa14.77□□□□□ -0.04
SNRPA1-208ENST00000559686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.77□□□□□ -0.04
SNRPA1-208ENST00000559686 GPATCH8Q9UKJ3 1502 aaKnown RBP14.76□□□□□ -0.05
SNRPA1-208ENST00000559686 TNRQ92752 1358 aa14.76□□□□□ -0.05
SNRPA1-208ENST00000559686 CASKIN1Q8WXD9 1431 aa14.75□□□□□ -0.05
SNRPA1-208ENST00000559686 ANKLE2Q86XL3 938 aa14.75□□□□□ -0.05
SNRPA1-208ENST00000559686 STRCP1A6NGW2 1772 aa14.75□□□□□ -0.05
SNRPA1-208ENST00000559686 CFDP1Q9UEE9 299 aaPredicted RBP14.74□□□□□ -0.05
SNRPA1-208ENST00000559686 RGS17Q9UGC6 210 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-208ENST00000559686 NPHP4O75161 1426 aaPredicted RBP14.73□□□□□ -0.05
SNRPA1-208ENST00000559686 IQGAP1P46940 1657 aa14.72□□□□□ -0.05
SNRPA1-208ENST00000559686 RNF17Q9BXT8 1623 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-208ENST00000559686 PLEKHH2Q8IVE3 1493 aa14.7□□□□□ -0.06
SNRPA1-208ENST00000559686 UGGT1Q9NYU2 1555 aa14.7□□□□□ -0.06
SNRPA1-208ENST00000559686 KIAA1107Q9UPP5 1409 aa14.7□□□□□ -0.06
SNRPA1-208ENST00000559686 LRRC7Q96NW7 1537 aa14.7□□□□□ -0.06
SNRPA1-208ENST00000559686 CCNB3Q8WWL7 1395 aa14.7□□□□□ -0.06
SNRPA1-208ENST00000559686 ZNF644Q9H582 1327 aaPredicted RBP14.69□□□□□ -0.06
SNRPA1-208ENST00000559686 KIF3BO15066 747 aa14.69□□□□□ -0.06
SNRPA1-208ENST00000559686 THEMISQ8N1K5 641 aaPredicted RBP14.69□□□□□ -0.06
SNRPA1-208ENST00000559686 PZPP20742 1482 aa14.69□□□□□ -0.06
SNRPA1-208ENST00000559686 FAM135AQ9P2D6 1515 aa14.68□□□□□ -0.06
SNRPA1-208ENST00000559686 DEPDC5O75140 1603 aa14.68□□□□□ -0.06
SNRPA1-208ENST00000559686 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
SNRPA1-208ENST00000559686 FYCO1Q9BQS8 1478 aa14.68□□□□□ -0.06
SNRPA1-208ENST00000559686 KDM5DQ9BY66 1539 aa14.67□□□□□ -0.06
SNRPA1-208ENST00000559686 SETD1AO15047 1707 aaKnown RBP14.67□□□□□ -0.06
SNRPA1-208ENST00000559686 WASHC2CQ9Y4E1 1318 aa14.66□□□□□ -0.06
SNRPA1-208ENST00000559686 SYNMO15061 1565 aa14.66□□□□□ -0.06
SNRPA1-208ENST00000559686 POTEAQ6S8J7 498 aa14.66□□□□□ -0.06
SNRPA1-208ENST00000559686 MED14O60244 1454 aa14.65□□□□□ -0.06
SNRPA1-208ENST00000559686 MIA2Q96PC5 1412 aa14.65□□□□□ -0.06
SNRPA1-208ENST00000559686 DHX29Q7Z478 1369 aaKnown RBP14.64□□□□□ -0.07
SNRPA1-208ENST00000559686 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
SNRPA1-208ENST00000559686 MTUS2Q5JR59 1369 aa14.62□□□□□ -0.07
SNRPA1-208ENST00000559686 TIAM1Q13009 1591 aa14.62□□□□□ -0.07
SNRPA1-208ENST00000559686 MBD5Q9P267 1494 aa14.61□□□□□ -0.07
SNRPA1-208ENST00000559686 XIRP1Q702N8 1843 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-208ENST00000559686 ZC3H13Q5T200 1668 aaKnown RBP14.61□□□□□ -0.07
SNRPA1-208ENST00000559686 RTEL1-TNFRSF6BF6WH68 1400 aa14.58□□□□□ -0.07
SNRPA1-208ENST00000559686 CFAP65Q6ZU64 1925 aaKnown RBP14.58□□□□□ -0.08
SNRPA1-208ENST00000559686 UBR1Q8IWV7 1749 aa14.55□□□□□ -0.08
SNRPA1-208ENST00000559686 CCDC141Q6ZP82 1450 aa14.55□□□□□ -0.08
SNRPA1-208ENST00000559686 SCAF11Q99590 1463 aaKnown RBP14.54□□□□□ -0.08
SNRPA1-208ENST00000559686 ROBO1Q9Y6N7 1651 aa14.54□□□□□ -0.08
SNRPA1-208ENST00000559686 CEP152O94986 1710 aa14.53□□□□□ -0.08
SNRPA1-208ENST00000559686 ERVK-7P63135 1459 aa14.53□□□□□ -0.08
SNRPA1-208ENST00000559686 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
SNRPA1-208ENST00000559686 RBM33Q96EV2 1170 aaKnown RBP14.53□□□□□ -0.08
SNRPA1-208ENST00000559686 ABCC3O15438 1527 aa14.52□□□□□ -0.08
SNRPA1-208ENST00000559686 CAMSAP2Q08AD1 1489 aa14.52□□□□□ -0.08
SNRPA1-208ENST00000559686 LTKP29376 864 aa14.52□□□□□ -0.09
SNRPA1-208ENST00000559686 TXNDC2Q86VQ3 553 aa14.52□□□□□ -0.09
SNRPA1-208ENST00000559686 EHBP1L1Q8N3D4 1523 aa14.51□□□□□ -0.09
SNRPA1-208ENST00000559686 FAM135BQ49AJ0 1406 aa14.49□□□□□ -0.09
SNRPA1-208ENST00000559686 NCOA2Q15596 1464 aa14.49□□□□□ -0.09
SNRPA1-208ENST00000559686 PHLPP1O60346 1717 aa14.48□□□□□ -0.09
SNRPA1-208ENST00000559686 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
SNRPA1-208ENST00000559686 TRIM52Q96A61 297 aa14.47□□□□□ -0.09
SNRPA1-208ENST00000559686 TSPY4P0CV99 314 aa14.46□□□□□ -0.09
SNRPA1-208ENST00000559686 TSPY10P0CW01 314 aa14.46□□□□□ -0.09
SNRPA1-208ENST00000559686 EID1Q9Y6B2 187 aa14.46□□□□□ -0.09
SNRPA1-208ENST00000559686 CEP162Q5TB80 1403 aa14.45□□□□□ -0.1
SNRPA1-208ENST00000559686 PROSER2Q86WR7 435 aaPredicted RBP14.45□□□□□ -0.1
SNRPA1-208ENST00000559686 UPF1Q92900 1129 aaKnown RBP eCLIP14.45□□□□□ -0.1
SNRPA1-208ENST00000559686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
SNRPA1-208ENST00000559686 SLIT1O75093 1534 aa14.45□□□□□ -0.1
SNRPA1-208ENST00000559686 PIK3C2BO00750 1634 aa14.44□□□□□ -0.1
SNRPA1-208ENST00000559686 ARHGAP23Q9P227 1491 aa14.44□□□□□ -0.1
SNRPA1-208ENST00000559686 MROH1Q8NDA8 1641 aa14.44□□□□□ -0.1
SNRPA1-208ENST00000559686 MAP3K1Q13233 1512 aa14.43□□□□□ -0.1
SNRPA1-208ENST00000559686 SLC26A8Q96RN1 970 aa14.43□□□□□ -0.1
SNRPA1-208ENST00000559686 ARHGEF5Q12774 1597 aa14.43□□□□□ -0.1
SNRPA1-208ENST00000559686 RSPH4AQ5TD94 716 aa14.42□□□□□ -0.1
SNRPA1-208ENST00000559686 MEX3CQ5U5Q3 659 aaKnown RBP14.42□□□□□ -0.1
SNRPA1-208ENST00000559686 STAG3Q9UJ98 1225 aa14.42□□□□□ -0.1
SNRPA1-208ENST00000559686 EIF2AK4Q9P2K8 1649 aaKnown RBP14.41□□□□□ -0.1
SNRPA1-208ENST00000559686 JCADQ9P266 1359 aa14.4□□□□□ -0.1
SNRPA1-208ENST00000559686 LRRC9Q6ZRR7 1453 aa14.39□□□□□ -0.11
SNRPA1-208ENST00000559686 KCNA6P17658 529 aa14.39□□□□□ -0.11
SNRPA1-208ENST00000559686 BCANQ96GW7 911 aa14.39□□□□□ -0.11
SNRPA1-208ENST00000559686 LRP6O75581 1613 aa14.38□□□□□ -0.11
SNRPA1-208ENST00000559686 MSH6P52701 1360 aa14.37□□□□□ -0.11
SNRPA1-208ENST00000559686 TMEM2Q9UHN6 1383 aa14.37□□□□□ -0.11
SNRPA1-208ENST00000559686 SLAIN2Q9P270 581 aa14.37□□□□□ -0.11
SNRPA1-208ENST00000559686 COL16A1Q07092 1604 aaPredicted RBP14.37□□□□□ -0.11
SNRPA1-208ENST00000559686 PRDM15P57071 1507 aaPredicted RBP14.36□□□□□ -0.11
SNRPA1-208ENST00000559686 MAST1Q9Y2H9 1570 aa14.36□□□□□ -0.11
SNRPA1-208ENST00000559686 EFCAB6Q5THR3 1501 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms