RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 MROH1Q8NDA8 1641 aa23.03■■□□□ 1.28
RPL28-208ENST00000559463 DUOX2Q9NRD8 1548 aa23.03■■□□□ 1.28
RPL28-208ENST00000559463 STRCQ7RTU9 1775 aa23.02■■□□□ 1.28
RPL28-208ENST00000559463 NPATQ14207 1427 aa23.02■■□□□ 1.28
RPL28-208ENST00000559463 MYO3AQ8NEV4 1616 aa23.02■■□□□ 1.28
RPL28-208ENST00000559463 PPP6R1Q9UPN7 881 aa23.02■■□□□ 1.28
RPL28-208ENST00000559463 ZNF142P52746 1687 aaPredicted RBP23■■□□□ 1.27
RPL28-208ENST00000559463 ZC3H13Q5T200 1668 aaKnown RBP23■■□□□ 1.27
RPL28-208ENST00000559463 PTPRKQ15262 1439 aa22.99■■□□□ 1.27
RPL28-208ENST00000559463 CEP152O94986 1710 aa22.99■■□□□ 1.27
RPL28-208ENST00000559463 KIF15Q9NS87 1388 aa22.97■■□□□ 1.27
RPL28-208ENST00000559463 ABCC3O15438 1527 aa22.95■■□□□ 1.26
RPL28-208ENST00000559463 DEPDC5O75140 1603 aa22.95■■□□□ 1.26
RPL28-208ENST00000559463 ERBINQ96RT1 1412 aa22.94■■□□□ 1.26
RPL28-208ENST00000559463 PZPP20742 1482 aa22.93■■□□□ 1.26
RPL28-208ENST00000559463 CFAP65Q6ZU64 1925 aaKnown RBP22.93■■□□□ 1.26
RPL28-208ENST00000559463 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
RPL28-208ENST00000559463 ADGRL2O95490 1459 aa22.92■■□□□ 1.26
RPL28-208ENST00000559463 CAMSAP1Q5T5Y3 1602 aa22.92■■□□□ 1.26
RPL28-208ENST00000559463 CEP170BQ9Y4F5 1589 aaPredicted RBP22.92■■□□□ 1.26
RPL28-208ENST00000559463 FAM50AQ14320 339 aaKnown RBP22.91■■□□□ 1.26
RPL28-208ENST00000559463 RRP7BPQ9NSQ0 103 aa22.91■■□□□ 1.26
RPL28-208ENST00000559463 WASHC2CQ9Y4E1 1318 aa22.9■■□□□ 1.26
RPL28-208ENST00000559463 PPARGC1BQ86YN6 1023 aaKnown RBP22.9■■□□□ 1.26
RPL28-208ENST00000559463 NCOA1Q15788 1441 aa22.9■■□□□ 1.26
RPL28-208ENST00000559463 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.26
RPL28-208ENST00000559463 CHIC2Q9UKJ5 165 aa22.89■■□□□ 1.25
RPL28-208ENST00000559463 FBXO31Q5XUX0 539 aaPredicted RBP22.83■■□□□ 1.25
RPL28-208ENST00000559463 SPATA31D1Q6ZQQ2 1576 aa22.83■■□□□ 1.25
RPL28-208ENST00000559463 A2ML1A8K2U0 1454 aa22.82■■□□□ 1.24
RPL28-208ENST00000559463 TNRQ92752 1358 aa22.82■■□□□ 1.24
RPL28-208ENST00000559463 VWDEQ8N2E2 1590 aa22.81■■□□□ 1.24
RPL28-208ENST00000559463 POLR1AO95602 1720 aaPredicted RBP22.79■■□□□ 1.24
RPL28-208ENST00000559463 ERVK-7P63135 1459 aa22.79■■□□□ 1.24
RPL28-208ENST00000559463 PLA2R1Q13018 1463 aa22.78■■□□□ 1.24
RPL28-208ENST00000559463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.77■■□□□ 1.24
RPL28-208ENST00000559463 LMTK2Q8IWU2 1503 aa22.76■■□□□ 1.23
RPL28-208ENST00000559463 PTPRTO14522 1441 aa22.75■■□□□ 1.23
RPL28-208ENST00000559463 ANKRD50Q9ULJ7 1429 aa22.75■■□□□ 1.23
RPL28-208ENST00000559463 NLRP1Q9C000 1473 aa22.75■■□□□ 1.23
RPL28-208ENST00000559463 UNC13BO14795 1591 aa22.75■■□□□ 1.23
RPL28-208ENST00000559463 ARHGAP31Q2M1Z3 1444 aa22.74■■□□□ 1.23
RPL28-208ENST00000559463 RRBP1Q9P2E9 1410 aaKnown RBP22.74■■□□□ 1.23
RPL28-208ENST00000559463 ROCK1Q13464 1354 aa22.74■■□□□ 1.23
RPL28-208ENST00000559463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.73■■□□□ 1.23
RPL28-208ENST00000559463 DMRT2Q9Y5R5 561 aa22.72■■□□□ 1.23
RPL28-208ENST00000559463 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
RPL28-208ENST00000559463 UGGT1Q9NYU2 1555 aa22.72■■□□□ 1.23
RPL28-208ENST00000559463 UBR1Q8IWV7 1749 aa22.71■■□□□ 1.23
RPL28-208ENST00000559463 KANK1Q14678 1352 aa22.71■■□□□ 1.23
RPL28-208ENST00000559463 ILDR1Q86SU0 546 aaPredicted RBP22.7■■□□□ 1.22
RPL28-208ENST00000559463 GCC2Q8IWJ2 1684 aa22.69■■□□□ 1.22
RPL28-208ENST00000559463 NEURL4Q96JN8 1562 aa22.69■■□□□ 1.22
RPL28-208ENST00000559463 NCKAP5LQ9HCH0 1330 aa22.69■■□□□ 1.22
RPL28-208ENST00000559463 TET3O43151 1660 aa22.68■■□□□ 1.22
RPL28-208ENST00000559463 ITGAEP38570 1179 aa22.67■■□□□ 1.22
RPL28-208ENST00000559463 SYNMO15061 1565 aa22.66■■□□□ 1.22
RPL28-208ENST00000559463 PIK3C2BO00750 1634 aa22.65■■□□□ 1.22
RPL28-208ENST00000559463 IQGAP3Q86VI3 1631 aa22.64■■□□□ 1.22
RPL28-208ENST00000559463 PKD2Q13563 968 aa22.64■■□□□ 1.21
RPL28-208ENST00000559463 LTBP4Q8N2S1 1624 aa22.64■■□□□ 1.21
RPL28-208ENST00000559463 E9PCH4 1651 aa22.62■■□□□ 1.21
RPL28-208ENST00000559463 KDM5AP29375 1690 aaKnown RBP22.62■■□□□ 1.21
RPL28-208ENST00000559463 NOS1P29475 1434 aa22.59■■□□□ 1.21
RPL28-208ENST00000559463 RPRD2Q5VT52 1461 aaKnown RBP22.59■■□□□ 1.21
RPL28-208ENST00000559463 MYO5BQ9ULV0 1848 aa22.59■■□□□ 1.21
RPL28-208ENST00000559463 IQGAP1P46940 1657 aa22.58■■□□□ 1.21
RPL28-208ENST00000559463 THEMISQ8N1K5 641 aaPredicted RBP22.58■■□□□ 1.21
RPL28-208ENST00000559463 CERKQ8TCT0 537 aa22.58■■□□□ 1.21
RPL28-208ENST00000559463 FBXO41Q8TF61 875 aa22.56■■□□□ 1.2
RPL28-208ENST00000559463 MED14O60244 1454 aa22.55■■□□□ 1.2
RPL28-208ENST00000559463 SLIT1O75093 1534 aa22.54■■□□□ 1.2
RPL28-208ENST00000559463 ARHGAP23Q9P227 1491 aa22.53■■□□□ 1.2
RPL28-208ENST00000559463 ADGRB3O60242 1522 aa22.52■■□□□ 1.2
RPL28-208ENST00000559463 NAIPQ13075 1403 aa22.52■■□□□ 1.2
RPL28-208ENST00000559463 ANKLE2Q86XL3 938 aa22.52■■□□□ 1.2
RPL28-208ENST00000559463 ZNF335Q9H4Z2 1342 aaPredicted RBP22.52■■□□□ 1.2
RPL28-208ENST00000559463 NPHP4O75161 1426 aaPredicted RBP22.51■■□□□ 1.19
RPL28-208ENST00000559463 SCAF11Q99590 1463 aaKnown RBP22.49■■□□□ 1.19
RPL28-208ENST00000559463 NUP155O75694 1391 aa22.49■■□□□ 1.19
RPL28-208ENST00000559463 IDI1Q13907 227 aa22.48■■□□□ 1.19
RPL28-208ENST00000559463 SPHKAPQ2M3C7 1700 aa22.48■■□□□ 1.19
RPL28-208ENST00000559463 STRCP1A6NGW2 1772 aa22.48■■□□□ 1.19
RPL28-208ENST00000559463 HFM1A2PYH4 1435 aa22.47■■□□□ 1.19
RPL28-208ENST00000559463 IQSEC2Q5JU85 1478 aa22.46■■□□□ 1.19
RPL28-208ENST00000559463 TMEM131LA2VDJ0 1609 aa22.46■■□□□ 1.19
RPL28-208ENST00000559463 TMEM2Q9UHN6 1383 aa22.44■■□□□ 1.18
RPL28-208ENST00000559463 LTKP29376 864 aa22.43■■□□□ 1.18
RPL28-208ENST00000559463 SLC52A1Q9NWF4 448 aa22.42■■□□□ 1.18
RPL28-208ENST00000559463 STAG3Q9UJ98 1225 aa22.4■■□□□ 1.18
RPL28-208ENST00000559463 CPS1P31327 1500 aa22.4■■□□□ 1.18
RPL28-208ENST00000559463 TXNDC2Q86VQ3 553 aa22.39■■□□□ 1.17
RPL28-208ENST00000559463 ZFYVE9O95405 1425 aa22.35■■□□□ 1.17
RPL28-208ENST00000559463 EID1Q9Y6B2 187 aa22.35■■□□□ 1.17
RPL28-208ENST00000559463 CLTCL1P53675 1640 aa22.34■■□□□ 1.17
RPL28-208ENST00000559463 XIRP1Q702N8 1843 aaKnown RBP22.33■■□□□ 1.16
RPL28-208ENST00000559463 TRPM2O94759 1503 aa22.31■■□□□ 1.16
RPL28-208ENST00000559463 KIF1BO60333 1816 aa22.31■■□□□ 1.16
RPL28-208ENST00000559463 RIMS2Q9UQ26 1411 aa22.3■■□□□ 1.16
RPL28-208ENST00000559463 LRRC7Q96NW7 1537 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms