RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 FGD6Q6ZV73 1430 aa39.23■■■■□ 3.87
CRNDE-206ENST00000559432 NCOA1Q15788 1441 aa39.21■■■■□ 3.87
CRNDE-206ENST00000559432 CAMSAP1Q5T5Y3 1602 aa39.19■■■■□ 3.86
CRNDE-206ENST00000559432 PTPRTO14522 1441 aa39.18■■■■□ 3.86
CRNDE-206ENST00000559432 ABCC5O15440 1437 aa39.18■■■■□ 3.86
CRNDE-206ENST00000559432 SHANK2Q9UPX8 1470 aa39.17■■■■□ 3.86
CRNDE-206ENST00000559432 CEP170BQ9Y4F5 1589 aaPredicted RBP39.16■■■■□ 3.86
CRNDE-206ENST00000559432 ZNF142P52746 1687 aaPredicted RBP39.16■■■■□ 3.86
CRNDE-206ENST00000559432 EIF2AK4Q9P2K8 1649 aaKnown RBP39.16■■■■□ 3.86
CRNDE-206ENST00000559432 PZPP20742 1482 aa39.16■■■■□ 3.86
CRNDE-206ENST00000559432 TCOF1Q13428 1488 aaKnown RBP39.16■■■■□ 3.86
CRNDE-206ENST00000559432 DUOX2Q9NRD8 1548 aa39.15■■■■□ 3.86
CRNDE-206ENST00000559432 RNF17Q9BXT8 1623 aaKnown RBP39.15■■■■□ 3.86
CRNDE-206ENST00000559432 CERKQ8TCT0 537 aa39.15■■■■□ 3.86
CRNDE-206ENST00000559432 CROCC2H7BZ55 1655 aa39.14■■■■□ 3.86
CRNDE-206ENST00000559432 DAPK1P53355 1430 aa39.14■■■■□ 3.86
CRNDE-206ENST00000559432 FBXO31Q5XUX0 539 aaPredicted RBP39.12■■■■□ 3.85
CRNDE-206ENST00000559432 TNRQ92752 1358 aa39.11■■■■□ 3.85
CRNDE-206ENST00000559432 DNMT1P26358 1616 aaKnown RBP39.11■■■■□ 3.85
CRNDE-206ENST00000559432 KIF15Q9NS87 1388 aa39.1■■■■□ 3.85
CRNDE-206ENST00000559432 RRP7BPQ9NSQ0 103 aa39.08■■■■□ 3.85
CRNDE-206ENST00000559432 A2ML1A8K2U0 1454 aa39.08■■■■□ 3.85
CRNDE-206ENST00000559432 PLA2R1Q13018 1463 aa39.06■■■■□ 3.84
CRNDE-206ENST00000559432 ZC3H13Q5T200 1668 aaKnown RBP39.06■■■■□ 3.84
CRNDE-206ENST00000559432 NCKAP5LQ9HCH0 1330 aa39.05■■■■□ 3.84
CRNDE-206ENST00000559432 ABCC3O15438 1527 aa39.04■■■■□ 3.84
CRNDE-206ENST00000559432 ERBINQ96RT1 1412 aa39.03■■■■□ 3.84
CRNDE-206ENST00000559432 PKD2Q13563 968 aa39.02■■■■□ 3.84
CRNDE-206ENST00000559432 CHIC2Q9UKJ5 165 aa39■■■■□ 3.83
CRNDE-206ENST00000559432 ANKRD30AQ9BXX3 1397 aa38.99■■■■□ 3.83
CRNDE-206ENST00000559432 FAM50AQ14320 339 aaKnown RBP38.99■■■■□ 3.83
CRNDE-206ENST00000559432 MROH1Q8NDA8 1641 aa38.99■■■■□ 3.83
CRNDE-206ENST00000559432 NLRP1Q9C000 1473 aa38.94■■■■□ 3.82
CRNDE-206ENST00000559432 PRDM15P57071 1507 aaPredicted RBP38.9■■■■□ 3.82
CRNDE-206ENST00000559432 CEP152O94986 1710 aa38.9■■■■□ 3.82
CRNDE-206ENST00000559432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.88■■■■□ 3.81
CRNDE-206ENST00000559432 SPATA31D1Q6ZQQ2 1576 aa38.87■■■■□ 3.81
CRNDE-206ENST00000559432 THEMISQ8N1K5 641 aaPredicted RBP38.86■■■■□ 3.81
CRNDE-206ENST00000559432 ERVK-7P63135 1459 aa38.86■■■■□ 3.81
CRNDE-206ENST00000559432 KANK1Q14678 1352 aa38.85■■■■□ 3.81
CRNDE-206ENST00000559432 LTBP4Q8N2S1 1624 aa38.85■■■■□ 3.81
CRNDE-206ENST00000559432 UGGT1Q9NYU2 1555 aa38.84■■■■□ 3.81
CRNDE-206ENST00000559432 ADGRL2O95490 1459 aa38.83■■■■□ 3.81
CRNDE-206ENST00000559432 DEPDC5O75140 1603 aa38.82■■■■□ 3.81
CRNDE-206ENST00000559432 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.81■■■■□ 3.8
CRNDE-206ENST00000559432 ARHGAP31Q2M1Z3 1444 aa38.79■■■■□ 3.8
CRNDE-206ENST00000559432 ANKLE2Q86XL3 938 aa38.78■■■■□ 3.8
CRNDE-206ENST00000559432 ZNF335Q9H4Z2 1342 aaPredicted RBP38.77■■■■□ 3.8
CRNDE-206ENST00000559432 POLR1AO95602 1720 aaPredicted RBP38.76■■■■□ 3.8
CRNDE-206ENST00000559432 IQSEC2Q5JU85 1478 aa38.71■■■■□ 3.79
CRNDE-206ENST00000559432 NEURL4Q96JN8 1562 aa38.7■■■■□ 3.79
CRNDE-206ENST00000559432 PPARGC1BQ86YN6 1023 aaKnown RBP38.7■■■■□ 3.79
CRNDE-206ENST00000559432 ANKRD50Q9ULJ7 1429 aa38.69■■■■□ 3.78
CRNDE-206ENST00000559432 LMTK2Q8IWU2 1503 aa38.68■■■■□ 3.78
CRNDE-206ENST00000559432 CFAP65Q6ZU64 1925 aaKnown RBP38.67■■■■□ 3.78
CRNDE-206ENST00000559432 VWDEQ8N2E2 1590 aa38.65■■■■□ 3.78
CRNDE-206ENST00000559432 NPHP4O75161 1426 aaPredicted RBP38.62■■■■□ 3.77
CRNDE-206ENST00000559432 MED14O60244 1454 aa38.6■■■■□ 3.77
CRNDE-206ENST00000559432 UBR1Q8IWV7 1749 aa38.59■■■■□ 3.77
CRNDE-206ENST00000559432 ROCK1Q13464 1354 aa38.57■■■■□ 3.76
CRNDE-206ENST00000559432 EFCAB6Q5THR3 1501 aa38.56■■■■□ 3.76
CRNDE-206ENST00000559432 ITGAEP38570 1179 aa38.55■■■■□ 3.76
CRNDE-206ENST00000559432 STAG3Q9UJ98 1225 aa38.53■■■■□ 3.76
CRNDE-206ENST00000559432 IQGAP1P46940 1657 aa38.52■■■■□ 3.76
CRNDE-206ENST00000559432 PIK3C2BO00750 1634 aa38.49■■■■□ 3.75
CRNDE-206ENST00000559432 CPS1P31327 1500 aa38.49■■■■□ 3.75
CRNDE-206ENST00000559432 SCAF11Q99590 1463 aaKnown RBP38.47■■■■□ 3.75
CRNDE-206ENST00000559432 TXNDC2Q86VQ3 553 aa38.46■■■■□ 3.75
CRNDE-206ENST00000559432 EID1Q9Y6B2 187 aa38.46■■■■□ 3.75
CRNDE-206ENST00000559432 SLIT1O75093 1534 aa38.46■■■■□ 3.75
CRNDE-206ENST00000559432 ARHGAP23Q9P227 1491 aa38.46■■■■□ 3.75
CRNDE-206ENST00000559432 NOS1P29475 1434 aa38.46■■■■□ 3.75
CRNDE-206ENST00000559432 IDI1Q13907 227 aa38.45■■■■□ 3.75
CRNDE-206ENST00000559432 RPRD2Q5VT52 1461 aaKnown RBP38.45■■■■□ 3.75
CRNDE-206ENST00000559432 UBAP1LF5GYI3 381 aa38.44■■■■□ 3.74
CRNDE-206ENST00000559432 UNC13BO14795 1591 aa38.44■■■■□ 3.74
CRNDE-206ENST00000559432 SYNMO15061 1565 aa38.44■■■■□ 3.74
CRNDE-206ENST00000559432 TET3O43151 1660 aa38.41■■■■□ 3.74
CRNDE-206ENST00000559432 LTKP29376 864 aa38.4■■■■□ 3.74
CRNDE-206ENST00000559432 SLC52A1Q9NWF4 448 aa38.4■■■■□ 3.74
CRNDE-206ENST00000559432 TMEM2Q9UHN6 1383 aa38.39■■■■□ 3.74
CRNDE-206ENST00000559432 KDM5AP29375 1690 aaKnown RBP38.39■■■■□ 3.74
CRNDE-206ENST00000559432 GCC2Q8IWJ2 1684 aa38.34■■■■□ 3.73
CRNDE-206ENST00000559432 RRBP1Q9P2E9 1410 aaKnown RBP38.33■■■■□ 3.73
CRNDE-206ENST00000559432 ADGRB3O60242 1522 aa38.33■■■■□ 3.73
CRNDE-206ENST00000559432 NUP155O75694 1391 aa38.3■■■■□ 3.72
CRNDE-206ENST00000559432 IQGAP3Q86VI3 1631 aa38.29■■■■□ 3.72
CRNDE-206ENST00000559432 TOM1O60784 492 aa38.26■■■■□ 3.72
CRNDE-206ENST00000559432 E9PCH4 1651 aa38.22■■■■□ 3.71
CRNDE-206ENST00000559432 SCAF1Q9H7N4 1312 aaKnown RBP38.21■■■■□ 3.71
CRNDE-206ENST00000559432 STRCP1A6NGW2 1772 aa38.2■■■■□ 3.71
CRNDE-206ENST00000559432 LRRC7Q96NW7 1537 aa38.19■■■■□ 3.7
CRNDE-206ENST00000559432 PIP4K2BP78356 416 aa38.18■■■■□ 3.7
CRNDE-206ENST00000559432 CHGAP10645 457 aaKnown RBP38.15■■■■□ 3.7
CRNDE-206ENST00000559432 HDGFP51858 240 aaKnown RBP38.14■■■■□ 3.7
CRNDE-206ENST00000559432 BCANQ96GW7 911 aa38.14■■■■□ 3.7
CRNDE-206ENST00000559432 PPP1R15AO75807 674 aaPredicted RBP38.11■■■■□ 3.69
CRNDE-206ENST00000559432 SLC26A8Q96RN1 970 aa38.11■■■■□ 3.69
CRNDE-206ENST00000559432 TMEM131LA2VDJ0 1609 aa38.11■■■■□ 3.69
CRNDE-206ENST00000559432 RIMS2Q9UQ26 1411 aa38.09■■■■□ 3.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms