RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 DAPK1P53355 1430 aa27.24■■□□□ 1.95
SMAD3-210ENST00000559092 KIF15Q9NS87 1388 aa27.23■■□□□ 1.95
SMAD3-210ENST00000559092 KDM5DQ9BY66 1539 aa27.23■■□□□ 1.95
SMAD3-210ENST00000559092 DUOX2Q9NRD8 1548 aa27.22■■□□□ 1.95
SMAD3-210ENST00000559092 RRP7BPQ9NSQ0 103 aa27.22■■□□□ 1.95
SMAD3-210ENST00000559092 ANKRD30AQ9BXX3 1397 aa27.19■■□□□ 1.94
SMAD3-210ENST00000559092 PZPP20742 1482 aa27.19■■□□□ 1.94
SMAD3-210ENST00000559092 FBXO31Q5XUX0 539 aaPredicted RBP27.18■■□□□ 1.94
SMAD3-210ENST00000559092 DNMT1P26358 1616 aaKnown RBP27.17■■□□□ 1.94
SMAD3-210ENST00000559092 FAM50AQ14320 339 aaKnown RBP27.17■■□□□ 1.94
SMAD3-210ENST00000559092 ERBINQ96RT1 1412 aa27.16■■□□□ 1.94
SMAD3-210ENST00000559092 EIF2AK4Q9P2K8 1649 aaKnown RBP27.16■■□□□ 1.94
SMAD3-210ENST00000559092 RNF17Q9BXT8 1623 aaKnown RBP27.16■■□□□ 1.94
SMAD3-210ENST00000559092 PTPRTO14522 1441 aa27.16■■□□□ 1.94
SMAD3-210ENST00000559092 NCOA1Q15788 1441 aa27.16■■□□□ 1.94
SMAD3-210ENST00000559092 CHIC2Q9UKJ5 165 aa27.15■■□□□ 1.94
SMAD3-210ENST00000559092 TNRQ92752 1358 aa27.14■■□□□ 1.94
SMAD3-210ENST00000559092 FBXO41Q8TF61 875 aa27.12■■□□□ 1.93
SMAD3-210ENST00000559092 PKD2Q13563 968 aa27.11■■□□□ 1.93
SMAD3-210ENST00000559092 STRCQ7RTU9 1775 aa27.11■■□□□ 1.93
SMAD3-210ENST00000559092 CROCC2H7BZ55 1655 aa27.11■■□□□ 1.93
SMAD3-210ENST00000559092 ABCC3O15438 1527 aa27.11■■□□□ 1.93
SMAD3-210ENST00000559092 A2ML1A8K2U0 1454 aa27.09■■□□□ 1.93
SMAD3-210ENST00000559092 CEP170BQ9Y4F5 1589 aaPredicted RBP27.09■■□□□ 1.93
SMAD3-210ENST00000559092 CAMSAP1Q5T5Y3 1602 aa27.08■■□□□ 1.93
SMAD3-210ENST00000559092 PLA2R1Q13018 1463 aa27.08■■□□□ 1.93
SMAD3-210ENST00000559092 MYO3AQ8NEV4 1616 aa27.08■■□□□ 1.93
SMAD3-210ENST00000559092 ADGRL2O95490 1459 aa27.06■■□□□ 1.92
SMAD3-210ENST00000559092 CERKQ8TCT0 537 aa27.06■■□□□ 1.92
SMAD3-210ENST00000559092 MROH1Q8NDA8 1641 aa27.05■■□□□ 1.92
SMAD3-210ENST00000559092 NCKAP5LQ9HCH0 1330 aa27.05■■□□□ 1.92
SMAD3-210ENST00000559092 ZNF142P52746 1687 aaPredicted RBP27.05■■□□□ 1.92
SMAD3-210ENST00000559092 KANK1Q14678 1352 aa27.04■■□□□ 1.92
SMAD3-210ENST00000559092 ZC3H13Q5T200 1668 aaKnown RBP27.04■■□□□ 1.92
SMAD3-210ENST00000559092 THEMISQ8N1K5 641 aaPredicted RBP27.03■■□□□ 1.92
SMAD3-210ENST00000559092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.03■■□□□ 1.92
SMAD3-210ENST00000559092 NLRP1Q9C000 1473 aa27.03■■□□□ 1.92
SMAD3-210ENST00000559092 PRDM15P57071 1507 aaPredicted RBP27.01■■□□□ 1.91
SMAD3-210ENST00000559092 ARHGAP31Q2M1Z3 1444 aa27.01■■□□□ 1.91
SMAD3-210ENST00000559092 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.99■■□□□ 1.91
SMAD3-210ENST00000559092 PPARGC1BQ86YN6 1023 aaKnown RBP26.99■■□□□ 1.91
SMAD3-210ENST00000559092 SPATA31D1Q6ZQQ2 1576 aa26.97■■□□□ 1.91
SMAD3-210ENST00000559092 ERVK-7P63135 1459 aa26.97■■□□□ 1.91
SMAD3-210ENST00000559092 ANKRD50Q9ULJ7 1429 aa26.96■■□□□ 1.91
SMAD3-210ENST00000559092 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
SMAD3-210ENST00000559092 ANKLE2Q86XL3 938 aa26.94■■□□□ 1.9
SMAD3-210ENST00000559092 DEPDC5O75140 1603 aa26.94■■□□□ 1.9
SMAD3-210ENST00000559092 LMTK2Q8IWU2 1503 aa26.92■■□□□ 1.9
SMAD3-210ENST00000559092 UGGT1Q9NYU2 1555 aa26.91■■□□□ 1.9
SMAD3-210ENST00000559092 VWDEQ8N2E2 1590 aa26.89■■□□□ 1.9
SMAD3-210ENST00000559092 CEP152O94986 1710 aa26.87■■□□□ 1.89
SMAD3-210ENST00000559092 ITGAEP38570 1179 aa26.85■■□□□ 1.89
SMAD3-210ENST00000559092 LTBP4Q8N2S1 1624 aa26.84■■□□□ 1.89
SMAD3-210ENST00000559092 ZNF335Q9H4Z2 1342 aaPredicted RBP26.83■■□□□ 1.89
SMAD3-210ENST00000559092 RRBP1Q9P2E9 1410 aaKnown RBP26.82■■□□□ 1.88
SMAD3-210ENST00000559092 MED14O60244 1454 aa26.8■■□□□ 1.88
SMAD3-210ENST00000559092 IQSEC2Q5JU85 1478 aa26.79■■□□□ 1.88
SMAD3-210ENST00000559092 IDI1Q13907 227 aa26.78■■□□□ 1.88
SMAD3-210ENST00000559092 SLC52A1Q9NWF4 448 aa26.78■■□□□ 1.88
SMAD3-210ENST00000559092 EFCAB6Q5THR3 1501 aa26.77■■□□□ 1.88
SMAD3-210ENST00000559092 RPRD2Q5VT52 1461 aaKnown RBP26.77■■□□□ 1.88
SMAD3-210ENST00000559092 NPHP4O75161 1426 aaPredicted RBP26.77■■□□□ 1.88
SMAD3-210ENST00000559092 NOS1P29475 1434 aa26.77■■□□□ 1.88
SMAD3-210ENST00000559092 NEURL4Q96JN8 1562 aa26.76■■□□□ 1.87
SMAD3-210ENST00000559092 STAG3Q9UJ98 1225 aa26.75■■□□□ 1.87
SMAD3-210ENST00000559092 TXNDC2Q86VQ3 553 aa26.73■■□□□ 1.87
SMAD3-210ENST00000559092 EID1Q9Y6B2 187 aa26.73■■□□□ 1.87
SMAD3-210ENST00000559092 ARHGAP23Q9P227 1491 aa26.71■■□□□ 1.87
SMAD3-210ENST00000559092 NUP155O75694 1391 aa26.71■■□□□ 1.87
SMAD3-210ENST00000559092 SLIT1O75093 1534 aa26.7■■□□□ 1.87
SMAD3-210ENST00000559092 LTKP29376 864 aa26.7■■□□□ 1.86
SMAD3-210ENST00000559092 UNC13BO14795 1591 aa26.7■■□□□ 1.86
SMAD3-210ENST00000559092 POLR1AO95602 1720 aaPredicted RBP26.7■■□□□ 1.86
SMAD3-210ENST00000559092 TMEM2Q9UHN6 1383 aa26.7■■□□□ 1.86
SMAD3-210ENST00000559092 SCAF11Q99590 1463 aaKnown RBP26.69■■□□□ 1.86
SMAD3-210ENST00000559092 UBR1Q8IWV7 1749 aa26.69■■□□□ 1.86
SMAD3-210ENST00000559092 CFAP65Q6ZU64 1925 aaKnown RBP26.69■■□□□ 1.86
SMAD3-210ENST00000559092 SYNMO15061 1565 aa26.65■■□□□ 1.86
SMAD3-210ENST00000559092 TET3O43151 1660 aa26.65■■□□□ 1.86
SMAD3-210ENST00000559092 CPS1P31327 1500 aa26.64■■□□□ 1.85
SMAD3-210ENST00000559092 PIK3C2BO00750 1634 aa26.63■■□□□ 1.85
SMAD3-210ENST00000559092 KDM5AP29375 1690 aaKnown RBP26.62■■□□□ 1.85
SMAD3-210ENST00000559092 IQGAP1P46940 1657 aa26.6■■□□□ 1.85
SMAD3-210ENST00000559092 NAIPQ13075 1403 aa26.59■■□□□ 1.85
SMAD3-210ENST00000559092 IQGAP3Q86VI3 1631 aa26.59■■□□□ 1.85
SMAD3-210ENST00000559092 UBAP1LF5GYI3 381 aa26.58■■□□□ 1.85
SMAD3-210ENST00000559092 HDGFP51858 240 aaKnown RBP26.58■■□□□ 1.85
SMAD3-210ENST00000559092 ADGRB3O60242 1522 aa26.57■■□□□ 1.84
SMAD3-210ENST00000559092 GCC2Q8IWJ2 1684 aa26.56■■□□□ 1.84
SMAD3-210ENST00000559092 HFM1A2PYH4 1435 aa26.54■■□□□ 1.84
SMAD3-210ENST00000559092 TOM1O60784 492 aa26.51■■□□□ 1.83
SMAD3-210ENST00000559092 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.5■■□□□ 1.83
SMAD3-210ENST00000559092 E9PCH4 1651 aa26.5■■□□□ 1.83
SMAD3-210ENST00000559092 CHGAP10645 457 aaKnown RBP26.48■■□□□ 1.83
SMAD3-210ENST00000559092 ZFYVE9O95405 1425 aa26.48■■□□□ 1.83
SMAD3-210ENST00000559092 RIMS2Q9UQ26 1411 aa26.46■■□□□ 1.83
SMAD3-210ENST00000559092 PPP1R15AO75807 674 aaPredicted RBP26.45■■□□□ 1.82
SMAD3-210ENST00000559092 KCNA6P17658 529 aa26.45■■□□□ 1.82
SMAD3-210ENST00000559092 SLC26A8Q96RN1 970 aa26.45■■□□□ 1.82
SMAD3-210ENST00000559092 LRRC7Q96NW7 1537 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms