RNA–Protein interactions for RNA: ENST00000558806.5

AP3S2-206, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 1 (best)

Gene AP3S2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-206ENST00000558806 VPS8Q8N3P4 1428 aa17.03■□□□□ 0.32
AP3S2-206ENST00000558806 TSPY4P0CV99 314 aa17.02■□□□□ 0.32
AP3S2-206ENST00000558806 TSPY10P0CW01 314 aa17.02■□□□□ 0.32
AP3S2-206ENST00000558806 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
AP3S2-206ENST00000558806 PZPP20742 1482 aa17.01■□□□□ 0.31
AP3S2-206ENST00000558806 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
AP3S2-206ENST00000558806 DNMT1P26358 1616 aaKnown RBP17.01■□□□□ 0.31
AP3S2-206ENST00000558806 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
AP3S2-206ENST00000558806 TNRQ92752 1358 aa17■□□□□ 0.31
AP3S2-206ENST00000558806 DISP3Q9P2K9 1392 aa16.99■□□□□ 0.31
AP3S2-206ENST00000558806 FBXO31Q5XUX0 539 aaPredicted RBP16.97■□□□□ 0.31
AP3S2-206ENST00000558806 MAP3K1Q13233 1512 aa16.96■□□□□ 0.31
AP3S2-206ENST00000558806 MAST1Q9Y2H9 1570 aa16.95■□□□□ 0.3
AP3S2-206ENST00000558806 NLRP1Q9C000 1473 aa16.94■□□□□ 0.3
AP3S2-206ENST00000558806 POLR1AO95602 1720 aaPredicted RBP16.94■□□□□ 0.3
AP3S2-206ENST00000558806 LOC105371045A0A1W2PR82 267 aa16.94■□□□□ 0.3
AP3S2-206ENST00000558806 MIA2Q96PC5 1412 aa16.94■□□□□ 0.3
AP3S2-206ENST00000558806 RNF17Q9BXT8 1623 aaKnown RBP16.93■□□□□ 0.3
AP3S2-206ENST00000558806 UBAP1LF5GYI3 381 aa16.93■□□□□ 0.3
AP3S2-206ENST00000558806 THEMISQ8N1K5 641 aaPredicted RBP16.92■□□□□ 0.3
AP3S2-206ENST00000558806 MYOM3Q5VTT5 1437 aa16.92■□□□□ 0.3
AP3S2-206ENST00000558806 EIF2AK4Q9P2K8 1649 aaKnown RBP16.92■□□□□ 0.3
AP3S2-206ENST00000558806 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
AP3S2-206ENST00000558806 SPATA31D1Q6ZQQ2 1576 aa16.91■□□□□ 0.3
AP3S2-206ENST00000558806 NEURL4Q96JN8 1562 aa16.91■□□□□ 0.3
AP3S2-206ENST00000558806 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
AP3S2-206ENST00000558806 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
AP3S2-206ENST00000558806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.9■□□□□ 0.3
AP3S2-206ENST00000558806 ANKLE2Q86XL3 938 aa16.9■□□□□ 0.3
AP3S2-206ENST00000558806 ABCC3O15438 1527 aa16.9■□□□□ 0.3
AP3S2-206ENST00000558806 CPS1P31327 1500 aa16.89■□□□□ 0.29
AP3S2-206ENST00000558806 SHANK2Q9UPX8 1470 aa16.87■□□□□ 0.29
AP3S2-206ENST00000558806 ILDR2Q71H61 639 aa16.87■□□□□ 0.29
AP3S2-206ENST00000558806 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
AP3S2-206ENST00000558806 MED14O60244 1454 aa16.86■□□□□ 0.29
AP3S2-206ENST00000558806 DUOX2Q9NRD8 1548 aa16.86■□□□□ 0.29
AP3S2-206ENST00000558806 NPHP4O75161 1426 aaPredicted RBP16.85■□□□□ 0.29
AP3S2-206ENST00000558806 ERVK-7P63135 1459 aa16.85■□□□□ 0.29
AP3S2-206ENST00000558806 MROH1Q8NDA8 1641 aa16.85■□□□□ 0.29
AP3S2-206ENST00000558806 APLP2Q06481 763 aa16.83■□□□□ 0.28
AP3S2-206ENST00000558806 VWDEQ8N2E2 1590 aa16.82■□□□□ 0.28
AP3S2-206ENST00000558806 SOCS7O14512 581 aa16.82■□□□□ 0.28
AP3S2-206ENST00000558806 TOM1O60784 492 aa16.82■□□□□ 0.28
AP3S2-206ENST00000558806 ERBINQ96RT1 1412 aa16.81■□□□□ 0.28
AP3S2-206ENST00000558806 KIF15Q9NS87 1388 aa16.81■□□□□ 0.28
AP3S2-206ENST00000558806 IQGAP1P46940 1657 aa16.81■□□□□ 0.28
AP3S2-206ENST00000558806 CEP152O94986 1710 aa16.8■□□□□ 0.28
AP3S2-206ENST00000558806 CROCC2H7BZ55 1655 aa16.8■□□□□ 0.28
AP3S2-206ENST00000558806 PTPN23Q9H3S7 1636 aa16.8■□□□□ 0.28
AP3S2-206ENST00000558806 PRDM15P57071 1507 aaPredicted RBP16.8■□□□□ 0.28
AP3S2-206ENST00000558806 ABCC5O15440 1437 aa16.79■□□□□ 0.28
AP3S2-206ENST00000558806 SCAF1Q9H7N4 1312 aaKnown RBP16.79■□□□□ 0.28
AP3S2-206ENST00000558806 ARHGAP31Q2M1Z3 1444 aa16.79■□□□□ 0.28
AP3S2-206ENST00000558806 PIP4K2BP78356 416 aa16.78■□□□□ 0.28
AP3S2-206ENST00000558806 RRP7BPQ9NSQ0 103 aa16.77■□□□□ 0.28
AP3S2-206ENST00000558806 DAPK1P53355 1430 aa16.77■□□□□ 0.27
AP3S2-206ENST00000558806 UBR1Q8IWV7 1749 aa16.76■□□□□ 0.27
AP3S2-206ENST00000558806 FGD6Q6ZV73 1430 aa16.75■□□□□ 0.27
AP3S2-206ENST00000558806 KANK1Q14678 1352 aa16.75■□□□□ 0.27
AP3S2-206ENST00000558806 SCAF11Q99590 1463 aaKnown RBP16.74■□□□□ 0.27
AP3S2-206ENST00000558806 HSPA1LP34931 641 aa16.74■□□□□ 0.27
AP3S2-206ENST00000558806 SYNMO15061 1565 aa16.73■□□□□ 0.27
AP3S2-206ENST00000558806 SLIT1O75093 1534 aa16.73■□□□□ 0.27
AP3S2-206ENST00000558806 ARHGAP23Q9P227 1491 aa16.73■□□□□ 0.27
AP3S2-206ENST00000558806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
AP3S2-206ENST00000558806 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
AP3S2-206ENST00000558806 CFAP65Q6ZU64 1925 aaKnown RBP16.72■□□□□ 0.27
AP3S2-206ENST00000558806 LRRC7Q96NW7 1537 aa16.71■□□□□ 0.27
AP3S2-206ENST00000558806 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
AP3S2-206ENST00000558806 TXNDC2Q86VQ3 553 aa16.7■□□□□ 0.26
AP3S2-206ENST00000558806 EID1Q9Y6B2 187 aa16.7■□□□□ 0.26
AP3S2-206ENST00000558806 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
AP3S2-206ENST00000558806 LTKP29376 864 aa16.69■□□□□ 0.26
AP3S2-206ENST00000558806 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
AP3S2-206ENST00000558806 CHIC2Q9UKJ5 165 aa16.68■□□□□ 0.26
AP3S2-206ENST00000558806 MED1Q15648 1581 aaPredicted RBP16.68■□□□□ 0.26
AP3S2-206ENST00000558806 PIK3C2BO00750 1634 aa16.67■□□□□ 0.26
AP3S2-206ENST00000558806 STAG3Q9UJ98 1225 aa16.67■□□□□ 0.26
AP3S2-206ENST00000558806 TMEM2Q9UHN6 1383 aa16.66■□□□□ 0.26
AP3S2-206ENST00000558806 KDM5AP29375 1690 aaKnown RBP16.66■□□□□ 0.26
AP3S2-206ENST00000558806 ADGRL2O95490 1459 aa16.65■□□□□ 0.26
AP3S2-206ENST00000558806 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
AP3S2-206ENST00000558806 IDI1Q13907 227 aa16.63■□□□□ 0.25
AP3S2-206ENST00000558806 NOS1P29475 1434 aa16.62■□□□□ 0.25
AP3S2-206ENST00000558806 FAM50AQ14320 339 aaKnown RBP16.6■□□□□ 0.25
AP3S2-206ENST00000558806 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
AP3S2-206ENST00000558806 ANKRD50Q9ULJ7 1429 aa16.59■□□□□ 0.25
AP3S2-206ENST00000558806 RPRD2Q5VT52 1461 aaKnown RBP16.59■□□□□ 0.25
AP3S2-206ENST00000558806 ADGRB3O60242 1522 aa16.59■□□□□ 0.25
AP3S2-206ENST00000558806 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
AP3S2-206ENST00000558806 XIRP1Q702N8 1843 aaKnown RBP16.56■□□□□ 0.24
AP3S2-206ENST00000558806 TET3O43151 1660 aa16.56■□□□□ 0.24
AP3S2-206ENST00000558806 KCNA6P17658 529 aa16.56■□□□□ 0.24
AP3S2-206ENST00000558806 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
AP3S2-206ENST00000558806 SLC26A8Q96RN1 970 aa16.55■□□□□ 0.24
AP3S2-206ENST00000558806 TMEM94Q12767 1356 aa16.54■□□□□ 0.24
AP3S2-206ENST00000558806 FAM135BQ49AJ0 1406 aa16.53■□□□□ 0.24
AP3S2-206ENST00000558806 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.23
AP3S2-206ENST00000558806 HDGFP51858 240 aaKnown RBP16.51■□□□□ 0.23
AP3S2-206ENST00000558806 PROSER2Q86WR7 435 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms