RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 PLXNC1O60486 1568 aa24.47■■□□□ 1.51
TUBB3-214ENST00000557490 PPARGC1BQ86YN6 1023 aaKnown RBP24.47■■□□□ 1.51
TUBB3-214ENST00000557490 NCKAP5LQ9HCH0 1330 aa24.44■■□□□ 1.5
TUBB3-214ENST00000557490 FAM50AQ14320 339 aaKnown RBP24.44■■□□□ 1.5
TUBB3-214ENST00000557490 MAST1Q9Y2H9 1570 aa24.44■■□□□ 1.5
TUBB3-214ENST00000557490 ABCC5O15440 1437 aa24.44■■□□□ 1.5
TUBB3-214ENST00000557490 CNTLNQ9NXG0 1405 aa24.43■■□□□ 1.5
TUBB3-214ENST00000557490 HSPA1LP34931 641 aa24.42■■□□□ 1.5
TUBB3-214ENST00000557490 GGT6Q6P531 493 aa24.42■■□□□ 1.5
TUBB3-214ENST00000557490 NPATQ14207 1427 aa24.42■■□□□ 1.5
TUBB3-214ENST00000557490 DAPK1P53355 1430 aa24.41■■□□□ 1.5
TUBB3-214ENST00000557490 SHANK2Q9UPX8 1470 aa24.4■■□□□ 1.5
TUBB3-214ENST00000557490 KIF3BO15066 747 aa24.4■■□□□ 1.5
TUBB3-214ENST00000557490 MROH2AA6NES4 1674 aa24.38■■□□□ 1.49
TUBB3-214ENST00000557490 PPP6R1Q9UPN7 881 aa24.38■■□□□ 1.49
TUBB3-214ENST00000557490 DNMT1P26358 1616 aaKnown RBP24.38■■□□□ 1.49
TUBB3-214ENST00000557490 PLA2R1Q13018 1463 aa24.37■■□□□ 1.49
TUBB3-214ENST00000557490 ZNF142P52746 1687 aaPredicted RBP24.37■■□□□ 1.49
TUBB3-214ENST00000557490 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
TUBB3-214ENST00000557490 CHIC2Q9UKJ5 165 aa24.34■■□□□ 1.49
TUBB3-214ENST00000557490 MYO3AQ8NEV4 1616 aa24.34■■□□□ 1.49
TUBB3-214ENST00000557490 KIF15Q9NS87 1388 aa24.33■■□□□ 1.49
TUBB3-214ENST00000557490 PKD2Q13563 968 aa24.33■■□□□ 1.49
TUBB3-214ENST00000557490 RRP7BPQ9NSQ0 103 aa24.33■■□□□ 1.49
TUBB3-214ENST00000557490 CROCC2H7BZ55 1655 aa24.33■■□□□ 1.49
TUBB3-214ENST00000557490 PIP4K2BP78356 416 aa24.32■■□□□ 1.48
TUBB3-214ENST00000557490 ANKRD30AQ9BXX3 1397 aa24.31■■□□□ 1.48
TUBB3-214ENST00000557490 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
TUBB3-214ENST00000557490 ZMYM3Q14202 1370 aa24.3■■□□□ 1.48
TUBB3-214ENST00000557490 CEP170BQ9Y4F5 1589 aaPredicted RBP24.3■■□□□ 1.48
TUBB3-214ENST00000557490 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
TUBB3-214ENST00000557490 WASHC2CQ9Y4E1 1318 aa24.26■■□□□ 1.47
TUBB3-214ENST00000557490 CLTCQ00610 1675 aaKnown RBP24.25■■□□□ 1.47
TUBB3-214ENST00000557490 TOM1O60784 492 aa24.24■■□□□ 1.47
TUBB3-214ENST00000557490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.24■■□□□ 1.47
TUBB3-214ENST00000557490 ERBINQ96RT1 1412 aa24.24■■□□□ 1.47
TUBB3-214ENST00000557490 EIF2AK4Q9P2K8 1649 aaKnown RBP24.24■■□□□ 1.47
TUBB3-214ENST00000557490 ADGRL2O95490 1459 aa24.23■■□□□ 1.47
TUBB3-214ENST00000557490 FAM135AQ9P2D6 1515 aa24.23■■□□□ 1.47
TUBB3-214ENST00000557490 CPS1P31327 1500 aa24.21■■□□□ 1.47
TUBB3-214ENST00000557490 KDM5DQ9BY66 1539 aa24.21■■□□□ 1.47
TUBB3-214ENST00000557490 PTPRKQ15262 1439 aa24.2■■□□□ 1.46
TUBB3-214ENST00000557490 ITGAEP38570 1179 aa24.2■■□□□ 1.46
TUBB3-214ENST00000557490 RNF17Q9BXT8 1623 aaKnown RBP24.2■■□□□ 1.46
TUBB3-214ENST00000557490 RRBP1Q9P2E9 1410 aaKnown RBP24.18■■□□□ 1.46
TUBB3-214ENST00000557490 ALKQ9UM73 1620 aa24.17■■□□□ 1.46
TUBB3-214ENST00000557490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.15■■□□□ 1.46
TUBB3-214ENST00000557490 POLR1AO95602 1720 aaPredicted RBP24.15■■□□□ 1.46
TUBB3-214ENST00000557490 ROCK1Q13464 1354 aa24.15■■□□□ 1.46
TUBB3-214ENST00000557490 NEURL4Q96JN8 1562 aa24.13■■□□□ 1.45
TUBB3-214ENST00000557490 ABCC3O15438 1527 aa24.13■■□□□ 1.45
TUBB3-214ENST00000557490 KANK1Q14678 1352 aa24.13■■□□□ 1.45
TUBB3-214ENST00000557490 ANKRD50Q9ULJ7 1429 aa24.12■■□□□ 1.45
TUBB3-214ENST00000557490 MROH1Q8NDA8 1641 aa24.12■■□□□ 1.45
TUBB3-214ENST00000557490 A2ML1A8K2U0 1454 aa24.11■■□□□ 1.45
TUBB3-214ENST00000557490 PZPP20742 1482 aa24.11■■□□□ 1.45
TUBB3-214ENST00000557490 ZC3H13Q5T200 1668 aaKnown RBP24.09■■□□□ 1.45
TUBB3-214ENST00000557490 FBXO31Q5XUX0 539 aaPredicted RBP24.09■■□□□ 1.45
TUBB3-214ENST00000557490 PRDM15P57071 1507 aaPredicted RBP24.09■■□□□ 1.45
TUBB3-214ENST00000557490 VWDEQ8N2E2 1590 aa24.07■■□□□ 1.44
TUBB3-214ENST00000557490 TNRQ92752 1358 aa24.06■■□□□ 1.44
TUBB3-214ENST00000557490 DEPDC5O75140 1603 aa24.06■■□□□ 1.44
TUBB3-214ENST00000557490 RGS17Q9UGC6 210 aaPredicted RBP24.05■■□□□ 1.44
TUBB3-214ENST00000557490 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
TUBB3-214ENST00000557490 CEP152O94986 1710 aa24.01■■□□□ 1.43
TUBB3-214ENST00000557490 ARHGAP31Q2M1Z3 1444 aa24■■□□□ 1.43
TUBB3-214ENST00000557490 LMTK2Q8IWU2 1503 aa23.98■■□□□ 1.43
TUBB3-214ENST00000557490 ERVK-7P63135 1459 aa23.97■■□□□ 1.43
TUBB3-214ENST00000557490 NLRP1Q9C000 1473 aa23.94■■□□□ 1.42
TUBB3-214ENST00000557490 STRCP1A6NGW2 1772 aa23.93■■□□□ 1.42
TUBB3-214ENST00000557490 UNC13BO14795 1591 aa23.91■■□□□ 1.42
TUBB3-214ENST00000557490 ANKLE2Q86XL3 938 aa23.91■■□□□ 1.42
TUBB3-214ENST00000557490 MED14O60244 1454 aa23.91■■□□□ 1.42
TUBB3-214ENST00000557490 NPHP4O75161 1426 aaPredicted RBP23.91■■□□□ 1.42
TUBB3-214ENST00000557490 LRRC7Q96NW7 1537 aa23.9■■□□□ 1.42
TUBB3-214ENST00000557490 NUP155O75694 1391 aa23.9■■□□□ 1.42
TUBB3-214ENST00000557490 EFCAB6Q5THR3 1501 aa23.89■■□□□ 1.42
TUBB3-214ENST00000557490 THEMISQ8N1K5 641 aaPredicted RBP23.89■■□□□ 1.41
TUBB3-214ENST00000557490 NAIPQ13075 1403 aa23.89■■□□□ 1.41
TUBB3-214ENST00000557490 SYNMO15061 1565 aa23.88■■□□□ 1.41
TUBB3-214ENST00000557490 IQGAP1P46940 1657 aa23.88■■□□□ 1.41
TUBB3-214ENST00000557490 HFM1A2PYH4 1435 aa23.86■■□□□ 1.41
TUBB3-214ENST00000557490 POTEAQ6S8J7 498 aa23.85■■□□□ 1.41
TUBB3-214ENST00000557490 RPRD2Q5VT52 1461 aaKnown RBP23.85■■□□□ 1.41
TUBB3-214ENST00000557490 UGGT1Q9NYU2 1555 aa23.85■■□□□ 1.41
TUBB3-214ENST00000557490 CFAP65Q6ZU64 1925 aaKnown RBP23.84■■□□□ 1.41
TUBB3-214ENST00000557490 TET3O43151 1660 aa23.84■■□□□ 1.41
TUBB3-214ENST00000557490 IQGAP3Q86VI3 1631 aa23.82■■□□□ 1.4
TUBB3-214ENST00000557490 NOS1P29475 1434 aa23.82■■□□□ 1.4
TUBB3-214ENST00000557490 GCC2Q8IWJ2 1684 aa23.82■■□□□ 1.4
TUBB3-214ENST00000557490 SETD1AO15047 1707 aaKnown RBP23.81■■□□□ 1.4
TUBB3-214ENST00000557490 STAG3Q9UJ98 1225 aa23.8■■□□□ 1.4
TUBB3-214ENST00000557490 SLC52A1Q9NWF4 448 aa23.79■■□□□ 1.4
TUBB3-214ENST00000557490 IDI1Q13907 227 aa23.78■■□□□ 1.4
TUBB3-214ENST00000557490 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
TUBB3-214ENST00000557490 XIRP1Q702N8 1843 aaKnown RBP23.73■■□□□ 1.39
TUBB3-214ENST00000557490 PIK3C2BO00750 1634 aa23.72■■□□□ 1.39
TUBB3-214ENST00000557490 E9PCH4 1651 aa23.72■■□□□ 1.39
TUBB3-214ENST00000557490 UBR1Q8IWV7 1749 aa23.72■■□□□ 1.39
TUBB3-214ENST00000557490 EID1Q9Y6B2 187 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms