RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 NISCHQ9Y2I1 1504 aa38.44■■■■□ 3.74
TUBB3-214ENST00000557490 ABCC9O60706 1549 aa34.92■■■■□ 3.18
TUBB3-214ENST00000557490 CCDC180Q9P1Z9 1646 aa34.15■■■■□ 3.06
TUBB3-214ENST00000557490 DNAJC5BQ9UF47 199 aa33.64■■■□□ 2.98
TUBB3-214ENST00000557490 RB1CC1Q8TDY2 1594 aa32.79■■■□□ 2.84
TUBB3-214ENST00000557490 NACADO15069 1562 aa32.33■■■□□ 2.77
TUBB3-214ENST00000557490 PABPN1Q86U42 306 aaKnown RBP eCLIP32.33■■■□□ 2.77
TUBB3-214ENST00000557490 DCAF8L2P0C7V8 631 aa32.25■■■□□ 2.75
TUBB3-214ENST00000557490 UNC13AQ9UPW8 1703 aa32.13■■■□□ 2.73
TUBB3-214ENST00000557490 ZCCHC6Q5VYS8 1495 aaKnown RBP32■■■□□ 2.71
TUBB3-214ENST00000557490 MYO15BQ96JP2 1530 aa31.95■■■□□ 2.71
TUBB3-214ENST00000557490 BICRAQ9NZM4 1560 aa31.93■■■□□ 2.7
TUBB3-214ENST00000557490 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
TUBB3-214ENST00000557490 DNAJC5Q9H3Z4 198 aa31.57■■■□□ 2.64
TUBB3-214ENST00000557490 CECR2Q9BXF3 1484 aa31.56■■■□□ 2.64
TUBB3-214ENST00000557490 CC2D2AQ9P2K1 1620 aa31.51■■■□□ 2.63
TUBB3-214ENST00000557490 SHROOM4Q9ULL8 1493 aa31.35■■■□□ 2.61
TUBB3-214ENST00000557490 EIF4G1Q04637 1599 aaKnown RBP31.21■■■□□ 2.59
TUBB3-214ENST00000557490 SCRIBQ14160 1630 aa31.2■■■□□ 2.58
TUBB3-214ENST00000557490 CUX2O14529 1486 aa30.5■■■□□ 2.47
TUBB3-214ENST00000557490 ERCC6Q03468 1493 aa30.2■■■□□ 2.43
TUBB3-214ENST00000557490 NCAPD3P42695 1498 aa29.87■■■□□ 2.37
TUBB3-214ENST00000557490 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
TUBB3-214ENST00000557490 BAZ1AQ9NRL2 1556 aaPredicted RBP29.81■■■□□ 2.36
TUBB3-214ENST00000557490 TRIM41Q8WV44 630 aa29.77■■■□□ 2.36
TUBB3-214ENST00000557490 NESP48681 1621 aa29.74■■■□□ 2.35
TUBB3-214ENST00000557490 ATAD2BQ9ULI0 1458 aa29.71■■■□□ 2.35
TUBB3-214ENST00000557490 SMARCA2P51531 1590 aa29.67■■■□□ 2.34
TUBB3-214ENST00000557490 THOC2Q8NI27 1593 aaKnown RBP29.66■■■□□ 2.34
TUBB3-214ENST00000557490 MROH2BQ7Z745 1585 aa29.62■■■□□ 2.33
TUBB3-214ENST00000557490 HMGXB3Q12766 1538 aa29.56■■■□□ 2.32
TUBB3-214ENST00000557490 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
TUBB3-214ENST00000557490 BAZ1BQ9UIG0 1483 aaKnown RBP29.48■■■□□ 2.31
TUBB3-214ENST00000557490 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
TUBB3-214ENST00000557490 KIF21AQ7Z4S6 1674 aa29.34■■■□□ 2.29
TUBB3-214ENST00000557490 RSF1Q96T23 1441 aaPredicted RBP29.28■■■□□ 2.28
TUBB3-214ENST00000557490 WIZO95785 1651 aa29.27■■■□□ 2.28
TUBB3-214ENST00000557490 PDS5BQ9NTI5 1447 aa29.18■■■□□ 2.26
TUBB3-214ENST00000557490 MRC2Q9UBG0 1479 aa29.03■■■□□ 2.24
TUBB3-214ENST00000557490 WDR62O43379 1518 aa29.01■■■□□ 2.23
TUBB3-214ENST00000557490 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
TUBB3-214ENST00000557490 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
TUBB3-214ENST00000557490 OSCARQ8IYS5 282 aa28.88■■■□□ 2.21
TUBB3-214ENST00000557490 CEP164Q9UPV0 1460 aa28.71■■■□□ 2.19
TUBB3-214ENST00000557490 RIMBP3CA6NJZ7 1639 aa28.7■■■□□ 2.19
TUBB3-214ENST00000557490 RIMBP3BA6NNM3 1639 aa28.7■■■□□ 2.19
TUBB3-214ENST00000557490 RIMBP3Q9UFD9 1639 aa28.7■■■□□ 2.19
TUBB3-214ENST00000557490 CCDC88BA6NC98 1476 aa28.66■■■□□ 2.18
TUBB3-214ENST00000557490 CFTRP13569 1480 aa28.65■■■□□ 2.18
TUBB3-214ENST00000557490 FANCD2Q9BXW9 1451 aa28.59■■■□□ 2.17
TUBB3-214ENST00000557490 SUPT5HO00267 1087 aaKnown RBP28.58■■■□□ 2.17
TUBB3-214ENST00000557490 ARHGEF11O15085 1522 aa28.5■■■□□ 2.15
TUBB3-214ENST00000557490 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
TUBB3-214ENST00000557490 PRDM2Q13029 1718 aa28.32■■■□□ 2.12
TUBB3-214ENST00000557490 CYB5RLQ6IPT4 315 aa28.29■■■□□ 2.12
TUBB3-214ENST00000557490 TRHP20396 242 aaPredicted RBP28.27■■■□□ 2.12
TUBB3-214ENST00000557490 ZNF608Q9ULD9 1512 aaPredicted RBP28.25■■■□□ 2.11
TUBB3-214ENST00000557490 IFT140Q96RY7 1462 aa28.16■■■□□ 2.1
TUBB3-214ENST00000557490 AEBP2Q6ZN18 517 aaPredicted RBP28.16■■■□□ 2.1
TUBB3-214ENST00000557490 ARAP1Q96P48 1450 aa28.15■■■□□ 2.1
TUBB3-214ENST00000557490 EIF4G3O43432 1585 aaKnown RBP28.06■■■□□ 2.08
TUBB3-214ENST00000557490 ABCC8Q09428 1581 aa28.06■■■□□ 2.08
TUBB3-214ENST00000557490 CHD1O14646 1710 aa28.04■■■□□ 2.08
TUBB3-214ENST00000557490 TOPBP1Q92547 1522 aa28.03■■■□□ 2.08
TUBB3-214ENST00000557490 DNMBPQ6XZF7 1577 aa27.99■■■□□ 2.07
TUBB3-214ENST00000557490 AQRO60306 1485 aaKnown RBP eCLIP27.84■■■□□ 2.05
TUBB3-214ENST00000557490 FBLN2P98095 1184 aa27.8■■■□□ 2.04
TUBB3-214ENST00000557490 TARBP1Q13395 1621 aaKnown RBP27.79■■■□□ 2.04
TUBB3-214ENST00000557490 CUX1P39880 1505 aa27.79■■■□□ 2.04
TUBB3-214ENST00000557490 POLA1P09884 1462 aaPredicted RBP27.79■■■□□ 2.04
TUBB3-214ENST00000557490 FGD5Q6ZNL6 1462 aa27.72■■■□□ 2.03
TUBB3-214ENST00000557490 SOGA1O94964 1423 aa27.72■■■□□ 2.03
TUBB3-214ENST00000557490 RAD54L2Q9Y4B4 1467 aa27.69■■■□□ 2.02
TUBB3-214ENST00000557490 CLASP1Q7Z460 1538 aa27.68■■■□□ 2.02
TUBB3-214ENST00000557490 WRNQ14191 1432 aaPredicted RBP eCLIP27.63■■■□□ 2.01
TUBB3-214ENST00000557490 TDRD9Q8NDG6 1382 aaKnown RBP27.57■■■□□ 2
TUBB3-214ENST00000557490 SYNJ1O43426 1573 aa27.55■■■□□ 2
TUBB3-214ENST00000557490 SNAPC4Q5SXM2 1469 aa27.54■■■□□ 2
TUBB3-214ENST00000557490 TOP2BQ02880 1626 aa27.52■■■□□ 2
TUBB3-214ENST00000557490 BIVM-ERCC5R4GMW8 1640 aa27.5■■□□□ 1.99
TUBB3-214ENST00000557490 WDR97A6NE52 1622 aa27.49■■□□□ 1.99
TUBB3-214ENST00000557490 ABCA10Q8WWZ4 1543 aa27.45■■□□□ 1.98
TUBB3-214ENST00000557490 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
TUBB3-214ENST00000557490 CHMP7Q8WUX9 453 aaPredicted RBP27.43■■□□□ 1.98
TUBB3-214ENST00000557490 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
TUBB3-214ENST00000557490 GRIN2BQ13224 1484 aa27.39■■□□□ 1.98
TUBB3-214ENST00000557490 SYNJ2O15056 1496 aa27.34■■□□□ 1.97
TUBB3-214ENST00000557490 ABCA5Q8WWZ7 1642 aa27.3■■□□□ 1.96
TUBB3-214ENST00000557490 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
TUBB3-214ENST00000557490 ERCC6L2Q5T890 1561 aa27.2■■□□□ 1.94
TUBB3-214ENST00000557490 KIF13AQ9H1H9 1805 aa27.16■■□□□ 1.94
TUBB3-214ENST00000557490 ERICH3Q5RHP9 1530 aa27.12■■□□□ 1.93
TUBB3-214ENST00000557490 ILDR1Q86SU0 546 aaPredicted RBP27.12■■□□□ 1.93
TUBB3-214ENST00000557490 KIF27Q86VH2 1401 aa27.08■■□□□ 1.93
TUBB3-214ENST00000557490 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
TUBB3-214ENST00000557490 ADAMTS12P58397 1594 aa27.06■■□□□ 1.92
TUBB3-214ENST00000557490 CEP170Q5SW79 1584 aa27.04■■□□□ 1.92
TUBB3-214ENST00000557490 GRIN2AQ12879 1464 aa27.02■■□□□ 1.92
TUBB3-214ENST00000557490 IGF1RP08069 1367 aa26.97■■□□□ 1.91
TUBB3-214ENST00000557490 SHROOM2Q13796 1616 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms