RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 RNF39Q9H2S5 420 aa17.91■□□□□ 0.46
HNRNPC-231ENST00000557336 DHX29Q7Z478 1369 aaKnown RBP17.9■□□□□ 0.46
HNRNPC-231ENST00000557336 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
HNRNPC-231ENST00000557336 LTBP4Q8N2S1 1624 aa17.88■□□□□ 0.45
HNRNPC-231ENST00000557336 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
HNRNPC-231ENST00000557336 CAMSAP2Q08AD1 1489 aa17.87■□□□□ 0.45
HNRNPC-231ENST00000557336 CAMSAP1Q5T5Y3 1602 aa17.87■□□□□ 0.45
HNRNPC-231ENST00000557336 NCKAP5LQ9HCH0 1330 aa17.86■□□□□ 0.45
HNRNPC-231ENST00000557336 CCDC141Q6ZP82 1450 aa17.85■□□□□ 0.45
HNRNPC-231ENST00000557336 VPS8Q8N3P4 1428 aa17.85■□□□□ 0.45
HNRNPC-231ENST00000557336 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
HNRNPC-231ENST00000557336 LRRC9Q6ZRR7 1453 aa17.83■□□□□ 0.45
HNRNPC-231ENST00000557336 ZBTB22O15209 634 aa17.83■□□□□ 0.44
HNRNPC-231ENST00000557336 MYO3AQ8NEV4 1616 aa17.83■□□□□ 0.44
HNRNPC-231ENST00000557336 KIF3BO15066 747 aa17.82■□□□□ 0.44
HNRNPC-231ENST00000557336 RSPH4AQ5TD94 716 aa17.82■□□□□ 0.44
HNRNPC-231ENST00000557336 FBXO31Q5XUX0 539 aaPredicted RBP17.82■□□□□ 0.44
HNRNPC-231ENST00000557336 TCOF1Q13428 1488 aaKnown RBP17.82■□□□□ 0.44
HNRNPC-231ENST00000557336 CEP170BQ9Y4F5 1589 aaPredicted RBP17.81■□□□□ 0.44
HNRNPC-231ENST00000557336 ZNF142P52746 1687 aaPredicted RBP17.8■□□□□ 0.44
HNRNPC-231ENST00000557336 PLA2R1Q13018 1463 aa17.8■□□□□ 0.44
HNRNPC-231ENST00000557336 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
HNRNPC-231ENST00000557336 U3KPZ7 1027 aaPredicted RBP17.79■□□□□ 0.44
HNRNPC-231ENST00000557336 ZNF335Q9H4Z2 1342 aaPredicted RBP17.78■□□□□ 0.44
HNRNPC-231ENST00000557336 PKD2Q13563 968 aa17.77■□□□□ 0.44
HNRNPC-231ENST00000557336 A2ML1A8K2U0 1454 aa17.76■□□□□ 0.43
HNRNPC-231ENST00000557336 MAP3K1Q13233 1512 aa17.76■□□□□ 0.43
HNRNPC-231ENST00000557336 DNMT1P26358 1616 aaKnown RBP17.75■□□□□ 0.43
HNRNPC-231ENST00000557336 PZPP20742 1482 aa17.75■□□□□ 0.43
HNRNPC-231ENST00000557336 KDM5DQ9BY66 1539 aa17.74■□□□□ 0.43
HNRNPC-231ENST00000557336 TSPY4P0CV99 314 aa17.74■□□□□ 0.43
HNRNPC-231ENST00000557336 TSPY10P0CW01 314 aa17.74■□□□□ 0.43
HNRNPC-231ENST00000557336 TNRQ92752 1358 aa17.74■□□□□ 0.43
HNRNPC-231ENST00000557336 IQSEC2Q5JU85 1478 aa17.74■□□□□ 0.43
HNRNPC-231ENST00000557336 WASHC2CQ9Y4E1 1318 aa17.73■□□□□ 0.43
HNRNPC-231ENST00000557336 FAM135AQ9P2D6 1515 aa17.72■□□□□ 0.43
HNRNPC-231ENST00000557336 MAST1Q9Y2H9 1570 aa17.71■□□□□ 0.43
HNRNPC-231ENST00000557336 MYOM3Q5VTT5 1437 aa17.71■□□□□ 0.43
HNRNPC-231ENST00000557336 MIA2Q96PC5 1412 aa17.71■□□□□ 0.43
HNRNPC-231ENST00000557336 NEURL4Q96JN8 1562 aa17.68■□□□□ 0.42
HNRNPC-231ENST00000557336 MROH1Q8NDA8 1641 aa17.67■□□□□ 0.42
HNRNPC-231ENST00000557336 RNF17Q9BXT8 1623 aaKnown RBP17.67■□□□□ 0.42
HNRNPC-231ENST00000557336 ABCC3O15438 1527 aa17.67■□□□□ 0.42
HNRNPC-231ENST00000557336 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.66■□□□□ 0.422e-10■□□□□ 8.9
HNRNPC-231ENST00000557336 FOXD4L1Q9NU39 408 aa17.65■□□□□ 0.42
HNRNPC-231ENST00000557336 NLRP1Q9C000 1473 aa17.64■□□□□ 0.41
HNRNPC-231ENST00000557336 ILDR2Q71H61 639 aa17.64■□□□□ 0.41
HNRNPC-231ENST00000557336 ABCC5O15440 1437 aa17.64■□□□□ 0.41
HNRNPC-231ENST00000557336 UBAP1LF5GYI3 381 aa17.62■□□□□ 0.41
HNRNPC-231ENST00000557336 THEMISQ8N1K5 641 aaPredicted RBP17.62■□□□□ 0.41
HNRNPC-231ENST00000557336 SPATA31D1Q6ZQQ2 1576 aa17.62■□□□□ 0.41
HNRNPC-231ENST00000557336 ANKLE2Q86XL3 938 aa17.61■□□□□ 0.41
HNRNPC-231ENST00000557336 DISP3Q9P2K9 1392 aa17.61■□□□□ 0.41
HNRNPC-231ENST00000557336 UGGT1Q9NYU2 1555 aa17.61■□□□□ 0.41
HNRNPC-231ENST00000557336 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
HNRNPC-231ENST00000557336 MED14O60244 1454 aa17.6■□□□□ 0.41
HNRNPC-231ENST00000557336 ERVK-7P63135 1459 aa17.6■□□□□ 0.41
HNRNPC-231ENST00000557336 POLR1AO95602 1720 aaPredicted RBP17.59■□□□□ 0.41
HNRNPC-231ENST00000557336 DUOX2Q9NRD8 1548 aa17.59■□□□□ 0.41
HNRNPC-231ENST00000557336 SHANK2Q9UPX8 1470 aa17.59■□□□□ 0.41
HNRNPC-231ENST00000557336 KIF15Q9NS87 1388 aa17.59■□□□□ 0.41
HNRNPC-231ENST00000557336 VWDEQ8N2E2 1590 aa17.58■□□□□ 0.41
HNRNPC-231ENST00000557336 RRP7BPQ9NSQ0 103 aa17.58■□□□□ 0.4
HNRNPC-231ENST00000557336 C1QBPQ07021 282 aaKnown RBP17.57■□□□□ 0.4
HNRNPC-231ENST00000557336 ZC3H13Q5T200 1668 aaKnown RBP17.57■□□□□ 0.4
HNRNPC-231ENST00000557336 NPHP4O75161 1426 aaPredicted RBP17.56■□□□□ 0.4
HNRNPC-231ENST00000557336 DEPDC5O75140 1603 aa17.56■□□□□ 0.4
HNRNPC-231ENST00000557336 PTPN23Q9H3S7 1636 aa17.56■□□□□ 0.4
HNRNPC-231ENST00000557336 DAPK1P53355 1430 aa17.55■□□□□ 0.4
HNRNPC-231ENST00000557336 FGD6Q6ZV73 1430 aa17.55■□□□□ 0.4
HNRNPC-231ENST00000557336 ARHGAP31Q2M1Z3 1444 aa17.55■□□□□ 0.4
HNRNPC-231ENST00000557336 CPS1P31327 1500 aa17.54■□□□□ 0.4
HNRNPC-231ENST00000557336 PRDM15P57071 1507 aaPredicted RBP17.54■□□□□ 0.4
HNRNPC-231ENST00000557336 CEP152O94986 1710 aa17.54■□□□□ 0.4
HNRNPC-231ENST00000557336 ERBINQ96RT1 1412 aa17.54■□□□□ 0.4
HNRNPC-231ENST00000557336 CROCC2H7BZ55 1655 aa17.53■□□□□ 0.4
HNRNPC-231ENST00000557336 ALKQ9UM73 1620 aa17.51■□□□□ 0.39
HNRNPC-231ENST00000557336 LTKP29376 864 aa17.51■□□□□ 0.39
HNRNPC-231ENST00000557336 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
HNRNPC-231ENST00000557336 APLP2Q06481 763 aa17.5■□□□□ 0.39
HNRNPC-231ENST00000557336 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
HNRNPC-231ENST00000557336 ARHGAP23Q9P227 1491 aa17.5■□□□□ 0.39
HNRNPC-231ENST00000557336 UBR1Q8IWV7 1749 aa17.5■□□□□ 0.39
HNRNPC-231ENST00000557336 CFAP65Q6ZU64 1925 aaKnown RBP17.49■□□□□ 0.39
HNRNPC-231ENST00000557336 STRCP1A6NGW2 1772 aa17.48■□□□□ 0.39
HNRNPC-231ENST00000557336 HSPA1LP34931 641 aa17.48■□□□□ 0.39
HNRNPC-231ENST00000557336 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
HNRNPC-231ENST00000557336 PIP4K2BP78356 416 aa17.47■□□□□ 0.39
HNRNPC-231ENST00000557336 SLIT1O75093 1534 aa17.47■□□□□ 0.39
HNRNPC-231ENST00000557336 TOM1O60784 492 aa17.46■□□□□ 0.39
HNRNPC-231ENST00000557336 LRRC7Q96NW7 1537 aa17.46■□□□□ 0.39
HNRNPC-231ENST00000557336 SCAF11Q99590 1463 aaKnown RBP17.45■□□□□ 0.38
HNRNPC-231ENST00000557336 ANKRD30AQ9BXX3 1397 aa17.45■□□□□ 0.38
HNRNPC-231ENST00000557336 SOCS7O14512 581 aa17.45■□□□□ 0.38
HNRNPC-231ENST00000557336 MYCNP04198 464 aaPredicted RBP17.45■□□□□ 0.38
HNRNPC-231ENST00000557336 LMTK2Q8IWU2 1503 aa17.45■□□□□ 0.38
HNRNPC-231ENST00000557336 IDI1Q13907 227 aa17.44■□□□□ 0.38
HNRNPC-231ENST00000557336 TXNDC2Q86VQ3 553 aa17.44■□□□□ 0.38
HNRNPC-231ENST00000557336 ADGRL2O95490 1459 aa17.44■□□□□ 0.38
HNRNPC-231ENST00000557336 KANK1Q14678 1352 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms