RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 FBXO31Q5XUX0 539 aaPredicted RBP35.47■■■■□ 3.27
ACTN1-220ENST00000556433 MYO3AQ8NEV4 1616 aa35.45■■■■□ 3.27
ACTN1-220ENST00000556433 CEP170BQ9Y4F5 1589 aaPredicted RBP35.42■■■■□ 3.26
ACTN1-220ENST00000556433 PKD2Q13563 968 aa35.42■■■■□ 3.26
ACTN1-220ENST00000556433 KDM5DQ9BY66 1539 aa35.42■■■■□ 3.26
ACTN1-220ENST00000556433 MAST1Q9Y2H9 1570 aa35.4■■■■□ 3.26
ACTN1-220ENST00000556433 TNRQ92752 1358 aa35.39■■■■□ 3.26
ACTN1-220ENST00000556433 FAM135AQ9P2D6 1515 aa35.39■■■■□ 3.26
ACTN1-220ENST00000556433 ZNF142P52746 1687 aaPredicted RBP35.39■■■■□ 3.26
ACTN1-220ENST00000556433 PLA2R1Q13018 1463 aa35.38■■■■□ 3.25
ACTN1-220ENST00000556433 A2ML1A8K2U0 1454 aa35.37■■■■□ 3.25
ACTN1-220ENST00000556433 PZPP20742 1482 aa35.37■■■■□ 3.25
ACTN1-220ENST00000556433 LTBP4Q8N2S1 1624 aa35.32■■■■□ 3.25
ACTN1-220ENST00000556433 TCOF1Q13428 1488 aaKnown RBP35.32■■■■□ 3.24
ACTN1-220ENST00000556433 DNMT1P26358 1616 aaKnown RBP35.28■■■■□ 3.24
ACTN1-220ENST00000556433 ZNF335Q9H4Z2 1342 aaPredicted RBP35.28■■■■□ 3.24
ACTN1-220ENST00000556433 ABCC5O15440 1437 aa35.27■■■■□ 3.24
ACTN1-220ENST00000556433 RNF17Q9BXT8 1623 aaKnown RBP35.25■■■■□ 3.23
ACTN1-220ENST00000556433 RRP7BPQ9NSQ0 103 aa35.25■■■■□ 3.23
ACTN1-220ENST00000556433 PTPN23Q9H3S7 1636 aa35.24■■■■□ 3.23
ACTN1-220ENST00000556433 DUOX2Q9NRD8 1548 aa35.23■■■■□ 3.23
ACTN1-220ENST00000556433 THEMISQ8N1K5 641 aaPredicted RBP35.23■■■■□ 3.23
ACTN1-220ENST00000556433 ABCC3O15438 1527 aa35.22■■■■□ 3.23
ACTN1-220ENST00000556433 KIF15Q9NS87 1388 aa35.22■■■■□ 3.23
ACTN1-220ENST00000556433 FGD6Q6ZV73 1430 aa35.22■■■■□ 3.23
ACTN1-220ENST00000556433 EIF2AK4Q9P2K8 1649 aaKnown RBP35.21■■■■□ 3.23
ACTN1-220ENST00000556433 NLRP1Q9C000 1473 aa35.19■■■■□ 3.22
ACTN1-220ENST00000556433 SHANK2Q9UPX8 1470 aa35.19■■■■□ 3.22
ACTN1-220ENST00000556433 DAPK1P53355 1430 aa35.18■■■■□ 3.22
ACTN1-220ENST00000556433 IQSEC2Q5JU85 1478 aa35.17■■■■□ 3.22
ACTN1-220ENST00000556433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.17■■■■□ 3.22
ACTN1-220ENST00000556433 ANKLE2Q86XL3 938 aa35.17■■■■□ 3.22
ACTN1-220ENST00000556433 CHIC2Q9UKJ5 165 aa35.15■■■■□ 3.22
ACTN1-220ENST00000556433 MROH1Q8NDA8 1641 aa35.14■■■■□ 3.22
ACTN1-220ENST00000556433 ZC3H13Q5T200 1668 aaKnown RBP35.14■■■■□ 3.22
ACTN1-220ENST00000556433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.12■■■■□ 3.211e-6■□□□□ 10.8
ACTN1-220ENST00000556433 ERBINQ96RT1 1412 aa35.11■■■■□ 3.21
ACTN1-220ENST00000556433 UGGT1Q9NYU2 1555 aa35.11■■■■□ 3.21
ACTN1-220ENST00000556433 CROCC2H7BZ55 1655 aa35.1■■■■□ 3.21
ACTN1-220ENST00000556433 ERVK-7P63135 1459 aa35.09■■■■□ 3.21
ACTN1-220ENST00000556433 SPATA31D1Q6ZQQ2 1576 aa35.08■■■■□ 3.21
ACTN1-220ENST00000556433 ANKRD30AQ9BXX3 1397 aa35.08■■■■□ 3.21
ACTN1-220ENST00000556433 FAM50AQ14320 339 aaKnown RBP35.05■■■■□ 3.2
ACTN1-220ENST00000556433 NEURL4Q96JN8 1562 aa35.04■■■■□ 3.2
ACTN1-220ENST00000556433 CEP152O94986 1710 aa35.04■■■■□ 3.2
ACTN1-220ENST00000556433 UBAP1LF5GYI3 381 aa35.03■■■■□ 3.2
ACTN1-220ENST00000556433 POLR1AO95602 1720 aaPredicted RBP35.03■■■■□ 3.2
ACTN1-220ENST00000556433 CFAP65Q6ZU64 1925 aaKnown RBP35.01■■■■□ 3.2
ACTN1-220ENST00000556433 PRDM15P57071 1507 aaPredicted RBP35.01■■■■□ 3.19
ACTN1-220ENST00000556433 KANK1Q14678 1352 aa35■■■■□ 3.19
ACTN1-220ENST00000556433 NPHP4O75161 1426 aaPredicted RBP34.99■■■■□ 3.19
ACTN1-220ENST00000556433 ARHGAP31Q2M1Z3 1444 aa34.99■■■■□ 3.19
ACTN1-220ENST00000556433 MED14O60244 1454 aa34.96■■■■□ 3.19
ACTN1-220ENST00000556433 DEPDC5O75140 1603 aa34.92■■■■□ 3.18
ACTN1-220ENST00000556433 CPS1P31327 1500 aa34.89■■■■□ 3.18
ACTN1-220ENST00000556433 ADGRL2O95490 1459 aa34.89■■■■□ 3.18
ACTN1-220ENST00000556433 TXNDC2Q86VQ3 553 aa34.85■■■■□ 3.17
ACTN1-220ENST00000556433 VWDEQ8N2E2 1590 aa34.85■■■■□ 3.17
ACTN1-220ENST00000556433 UBR1Q8IWV7 1749 aa34.84■■■■□ 3.17
ACTN1-220ENST00000556433 STAG3Q9UJ98 1225 aa34.84■■■■□ 3.17
ACTN1-220ENST00000556433 DISP3Q9P2K9 1392 aa34.84■■■■□ 3.17
ACTN1-220ENST00000556433 LMTK2Q8IWU2 1503 aa34.83■■■■□ 3.17
ACTN1-220ENST00000556433 LTKP29376 864 aa34.83■■■■□ 3.17
ACTN1-220ENST00000556433 IQGAP1P46940 1657 aa34.82■■■■□ 3.17
ACTN1-220ENST00000556433 TOM1O60784 492 aa34.81■■■■□ 3.16
ACTN1-220ENST00000556433 ANKRD50Q9ULJ7 1429 aa34.81■■■■□ 3.16
ACTN1-220ENST00000556433 IDI1Q13907 227 aa34.8■■■■□ 3.16
ACTN1-220ENST00000556433 EID1Q9Y6B2 187 aa34.8■■■■□ 3.16
ACTN1-220ENST00000556433 SCAF11Q99590 1463 aaKnown RBP34.79■■■■□ 3.16
ACTN1-220ENST00000556433 SCAF1Q9H7N4 1312 aaKnown RBP34.78■■■■□ 3.16
ACTN1-220ENST00000556433 ARHGAP23Q9P227 1491 aa34.78■■■■□ 3.16
ACTN1-220ENST00000556433 PIP4K2BP78356 416 aa34.77■■■■□ 3.16
ACTN1-220ENST00000556433 SLIT1O75093 1534 aa34.76■■■■□ 3.15
ACTN1-220ENST00000556433 PPARGC1BQ86YN6 1023 aaKnown RBP34.74■■■■□ 3.15
ACTN1-220ENST00000556433 PIK3C2BO00750 1634 aa34.73■■■■□ 3.15
ACTN1-220ENST00000556433 TMEM2Q9UHN6 1383 aa34.73■■■■□ 3.15
ACTN1-220ENST00000556433 NOS1P29475 1434 aa34.7■■■■□ 3.15
ACTN1-220ENST00000556433 EFCAB6Q5THR3 1501 aa34.7■■■■□ 3.14
ACTN1-220ENST00000556433 SLC52A1Q9NWF4 448 aa34.68■■■■□ 3.14
ACTN1-220ENST00000556433 ITGAEP38570 1179 aa34.66■■■■□ 3.14
ACTN1-220ENST00000556433 SYNMO15061 1565 aa34.66■■■■□ 3.14
ACTN1-220ENST00000556433 ILDR2Q71H61 639 aa34.65■■■■□ 3.14
ACTN1-220ENST00000556433 LRRC7Q96NW7 1537 aa34.65■■■■□ 3.14
ACTN1-220ENST00000556433 HSPA1LP34931 641 aa34.64■■■■□ 3.14
ACTN1-220ENST00000556433 ROCK1Q13464 1354 aa34.63■■■■□ 3.13
ACTN1-220ENST00000556433 STRCP1A6NGW2 1772 aa34.63■■■■□ 3.13
ACTN1-220ENST00000556433 RPRD2Q5VT52 1461 aaKnown RBP34.6■■■■□ 3.13
ACTN1-220ENST00000556433 KDM5AP29375 1690 aaKnown RBP34.58■■■■□ 3.13
ACTN1-220ENST00000556433 SOCS7O14512 581 aa34.54■■■■□ 3.12
ACTN1-220ENST00000556433 SLC26A8Q96RN1 970 aa34.54■■■■□ 3.12
ACTN1-220ENST00000556433 ADGRB3O60242 1522 aa34.54■■■■□ 3.12
ACTN1-220ENST00000556433 TET3O43151 1660 aa34.54■■■■□ 3.12
ACTN1-220ENST00000556433 BCANQ96GW7 911 aa34.52■■■■□ 3.12
ACTN1-220ENST00000556433 ALKQ9UM73 1620 aa34.52■■■■□ 3.12
ACTN1-220ENST00000556433 UNC13BO14795 1591 aa34.51■■■■□ 3.12
ACTN1-220ENST00000556433 KCNA6P17658 529 aa34.49■■■■□ 3.11
ACTN1-220ENST00000556433 NUP155O75694 1391 aa34.49■■■■□ 3.11
ACTN1-220ENST00000556433 CHGAP10645 457 aaKnown RBP34.47■■■■□ 3.11
ACTN1-220ENST00000556433 HDGFP51858 240 aaKnown RBP34.47■■■■□ 3.11
ACTN1-220ENST00000556433 SENP3Q9H4L4 574 aaPredicted RBP34.45■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms